BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0179600 Os02g0179600|AK110418
(656 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13210.1 | chr5:4214567-4216588 FORWARD LENGTH=674 613 e-176
AT5G43400.1 | chr5:17426182-17428149 REVERSE LENGTH=656 597 e-171
AT5G43390.1 | chr5:17422940-17424871 REVERSE LENGTH=644 590 e-169
AT3G24780.1 | chr3:9049446-9051593 FORWARD LENGTH=716 560 e-160
>AT5G13210.1 | chr5:4214567-4216588 FORWARD LENGTH=674
Length = 673
Score = 613 bits (1582), Expect = e-176, Method: Compositional matrix adjust.
Identities = 324/660 (49%), Positives = 405/660 (61%), Gaps = 41/660 (6%)
Query: 28 TTTG--DAFLDLMDANFNKPA-------PRKALTENLSPTFVSSGDACLDFFFHVVPGTP 78
TT+G D F+D M +NFN A P TEN S T++SSG+ CLDFFFHVVP TP
Sbjct: 24 TTSGPSDPFMDAMVSNFNNSARVNNVNSPPMGYTENKSATYLSSGNPCLDFFFHVVPSTP 83
Query: 79 SXXXXXXXXXXXXXXXXXXXRLVANLRGVRGTGKSDREGFYAAALWLHSHHPXXXXXXXX 138
+L+ NLRGVRGTGKSD+EGFY AALWLH HP
Sbjct: 84 KHSLEQWLQGAWDHDALTTLKLICNLRGVRGTGKSDKEGFYTAALWLHGRHPKTLACNLE 143
Query: 139 XXXXFGYLKDLPELLHRIVNGGLSTRKPGKKARLAAADXXXXXXXXXXXXXXXXXXXXXX 198
FGY KD PELL+RI+ G RK K R
Sbjct: 144 SLSQFGYFKDFPELLYRILQGS-EIRKIQKSERFKRKSEALDRRAPYDGHCYHGRLYGGR 202
Query: 199 XXXXXXXYHTSSRKQSR--GVGSAEERIAASLERDGRLXXXXXXXXXXXXXXXXXXXXXX 256
SSR S+ V + R+A + ++
Sbjct: 203 GR-------GSSRPSSKRKPVATRALRVANAERKNQAEKARASLDRKKKKVSMGKDAFTR 255
Query: 257 YSRDPTYRSLHDRTADLFADLLRDDMRKLAEGNVHEFSLAAKWCPSLDKSYDRSTLLCEA 316
YS DP YR LH+R +DLFA+ L+ D+ L +E SLAAKWCPSLD S+D++TLLCE+
Sbjct: 256 YSCDPDYRYLHERVSDLFANQLKKDLEFLTSDKPNEISLAAKWCPSLDSSFDKATLLCES 315
Query: 317 IARRLFPKGSLPELAADLPDAHYAYRARERLRKAALVPLRRALKLPEVYISARAWESVVY 376
IAR++F + S PE + +AHYAYR R+RLRK LVPLR+ L+LPEVY+ AR W+ + Y
Sbjct: 316 IARKIFTRESFPEYEG-VVEAHYAYRVRDRLRKDVLVPLRKTLQLPEVYMGARNWDILPY 374
Query: 377 TRVASVAMKNYKDLFLKHDADRFNAYLADVKSGKKKISAGALLPHQIIXXXXXXXXXXXV 436
RVASVAMK+YK++FLKHDA+RF YL D K+GK K++AGA+LPH+II V
Sbjct: 375 NRVASVAMKSYKEIFLKHDAERFQQYLDDAKAGKTKVAAGAVLPHEIIRELDGGDGGQ-V 433
Query: 437 ADLQWQRMVDDMRALGKLRNCVAVCDVSGSMTGLPMDVCVALGLLVSDLSDDPWRGRVIT 496
A+LQW+R VDDM+ G LRNC+AVCDVSGSM G PM+VCVALGLLVS+LS++PW+G++IT
Sbjct: 434 AELQWKRTVDDMKEKGSLRNCIAVCDVSGSMNGEPMEVCVALGLLVSELSEEPWKGKLIT 493
Query: 497 FSESPQLHHIVGEALSDKARFIREMNWGMNTNFQAVFDKILEVAAGAALSPDKMVRRVVV 556
FS++P+LH + G+ L K F+++M WGMNT+FQ VFD IL VA L P++M++RV V
Sbjct: 494 FSQNPELHLVKGDDLYSKTEFVKKMQWGMNTDFQKVFDLILGVAVQEKLKPEEMIKRVFV 553
Query: 557 FSDMEFDQASA-------------QP-------WETDYEAIVRKYTAAGYGAAVPEVVFW 596
FSDMEFDQA++ QP WETDYE IVRKY GYG VPE+VFW
Sbjct: 554 FSDMEFDQAASSSHYSRPGYAFLRQPPSNPSNGWETDYEVIVRKYKQNGYGDVVPEIVFW 613
Query: 597 NLRDSKAVPVTSGQKGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
NLRDS+A PV +KGVALVSGFSKNL+K+FL+ DG + P +ME AIS EY LVV D
Sbjct: 614 NLRDSRATPVPGNKKGVALVSGFSKNLMKMFLEHDGEIDPVMMMETAISKDEYKSLVVVD 673
>AT5G43400.1 | chr5:17426182-17428149 REVERSE LENGTH=656
Length = 655
Score = 597 bits (1538), Expect = e-171, Method: Compositional matrix adjust.
Identities = 311/645 (48%), Positives = 389/645 (60%), Gaps = 63/645 (9%)
Query: 41 NFNKPAPRKALTENLSPTFVSSGDACLDFFFHVVPGTPSXXXXXXXXXXXXXXXXXXXRL 100
N +P P LTEN SPTF+SSG+ CLDFFFH+VP T +L
Sbjct: 45 NLEEPPPM-GLTENFSPTFLSSGNPCLDFFFHIVPDTSPDDLIQRLAISWSHDPLTTLKL 103
Query: 101 VANLRGVRGTGKSDREGFYAAALWLHSHHPXXXXXXXXXXXXFGYLKDLPELLHRIVNGG 160
+ NLRGVRGTGKSD+EGFY AA WL+ +HP FGY KDLPE+L RI+ G
Sbjct: 104 ICNLRGVRGTGKSDKEGFYTAAFWLYKNHPKTLALNVPALVDFGYFKDLPEILFRILEGQ 163
Query: 161 LSTRKPGKKARLAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHTSSRKQSRGVGSA 220
R + R + K+S G
Sbjct: 164 NMERGKNRVWR----------------------------KRVQRKFKGKREKKSEISGEM 195
Query: 221 EERIAASLERDGRL--XXXXXXXXXXXXXXXXXXXXXXYSRDPTYRSLHDRTADLFADLL 278
E+RI + E G Y+ D YR L DR ADLFA LL
Sbjct: 196 EDRILENAEEIGGSVDKVKARALRKQREFEKAKKAVTRYNSDANYRLLFDRIADLFAVLL 255
Query: 279 RDDMRKLAEGNVHEFSLAAKWCPSLDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDAH 338
+ D++ L + + SLA+KWCPS+D SYD++TL+CEAIARR+FP+ E + +AH
Sbjct: 256 KSDLKYLNSNGLTKISLASKWCPSVDSSYDKATLICEAIARRMFPR----EEYEGIEEAH 311
Query: 339 YAYRARERLRKAALVPLRRALKLPEVYISARAWESVVYTRVASVAMKNYKDLFLKHDADR 398
YAYR R+RLRK LVPL +AL+ PE+++SA+ W + Y RV SVAMKNYK LF +HD++R
Sbjct: 312 YAYRIRDRLRKEVLVPLHKALEFPELFMSAKEWNLLKYNRVPSVAMKNYKKLFEEHDSER 371
Query: 399 FNAYLADVKSGKKKISAGALLPHQIIXXXXX---XXXXXXVADLQWQRMVDDMRALGKLR 455
F +L DVKSGKKKI+AGALLPHQII VA+LQW RMVDD+ GKL+
Sbjct: 372 FTEFLEDVKSGKKKIAAGALLPHQIINQLEDDSGSEVGAEVAELQWARMVDDLAKKGKLK 431
Query: 456 NCVAVCDVSGSMTGLPMDVCVALGLLVSDLSDDPWRGRVITFSESPQLHHIVGEALSDKA 515
N +AVCDVSGSM+G PM+VCVALGLLVS+LS++PW+G+VITFSE+P+LH + G +L +K
Sbjct: 432 NSLAVCDVSGSMSGTPMEVCVALGLLVSELSEEPWKGKVITFSENPELHIVTGSSLREKT 491
Query: 516 RFIREMNWGMNTNFQAVFDKILEVAAGAALSPDKMVRRVVVFSDMEFDQA---------- 565
+F+REM WGMNT+FQ VFD+ILEVA L+ D+M++R+ VFSDMEFD A
Sbjct: 492 QFVREMEWGMNTDFQIVFDRILEVAVENNLTDDQMIKRLFVFSDMEFDDAMANSHSEVSY 551
Query: 566 --------------SAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRDSKAVPVTSGQK 611
S + WETDYE + RKY G+ VPE+VFWNLRDS A PV + QK
Sbjct: 552 HLSVEDRLKISKERSKEKWETDYEVVQRKYKEKGF-QNVPEMVFWNLRDSSATPVVANQK 610
Query: 612 GVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
GVA+VSGFSKNLL LFL+ G+V+P VM AI G EY KLVVFD
Sbjct: 611 GVAMVSGFSKNLLTLFLEEGGIVNPEDVMWIAIKGEEYKKLVVFD 655
>AT5G43390.1 | chr5:17422940-17424871 REVERSE LENGTH=644
Length = 643
Score = 590 bits (1520), Expect = e-169, Method: Compositional matrix adjust.
Identities = 303/643 (47%), Positives = 391/643 (60%), Gaps = 58/643 (9%)
Query: 40 ANFNKPAPRKALTENLSPTFVSSGDACLDFFFHVVPGTPSXXXXXXXXXXXXXXXXXXXR 99
A N P+ LTEN SPTF++SG+ CLDFFFH+VP TPS +
Sbjct: 33 ATLNLEEPQMGLTENFSPTFLTSGNPCLDFFFHIVPDTPSDDLIQRLAISWSHDPLTTLK 92
Query: 100 LVANLRGVRGTGKSDREGFYAAALWLHSHHPXXXXXXXXXXXXFGYLKDLPELLHRIVNG 159
L+ NLRGVRGTGKSD+EGFY AALWL+ +HP FGY KDLPE+L RI+ G
Sbjct: 93 LLCNLRGVRGTGKSDKEGFYTAALWLYKNHPKTLALNIPTLVDFGYFKDLPEILLRILEG 152
Query: 160 GLSTRKPGKKARLAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHTSSRKQSRGVGS 219
+ R + R + S K+S G
Sbjct: 153 QQTERGKTRVWR----------------------------KRIQRKFKGDSEKKSTISGD 184
Query: 220 AEERIAASLERDGRLXXXXXXXXXXXXXXXXXXXXXX--YSRDPTYRSLHDRTADLFADL 277
E+RI + E G Y+ D YR L D+ ADLFA+L
Sbjct: 185 MEDRILETAEETGGPVGKVKARALRKQREFEKAKKALDRYNSDANYRLLFDQIADLFAEL 244
Query: 278 LRDDMRKLAEGNVHEFSLAAKWCPSLDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDA 337
L+ D+ L N+++ SLA+KWCPS+D SYD++TL+CEAIARR+F + E ++
Sbjct: 245 LKSDLEYLNTDNLNKISLASKWCPSVDSSYDKTTLICEAIARRMFLREEYEEGIEEV--- 301
Query: 338 HYAYRARERLRKAALVPLRRALKLPEVYISARAWESVVYTRVASVAMKNYKDLFLKHDAD 397
HYAYR R+RLRK LVPL +AL+LPEV +SA+ W + Y RV S+AM+NY F +HD++
Sbjct: 302 HYAYRIRDRLRKEVLVPLHKALELPEVSMSAKEWNLLKYNRVPSIAMQNYSSRFAEHDSE 361
Query: 398 RFNAYLADVKSGKKKISAGALLPHQIIXXXXXXXXXXXVADLQWQRMVDDMRALGKLRNC 457
RF +L DVKSGKKK++AGALLPHQII VA+LQW RMVDD+ GKL+N
Sbjct: 362 RFTEFLEDVKSGKKKMAAGALLPHQIISQLLNDSEGEEVAELQWARMVDDLAKKGKLKNS 421
Query: 458 VAVCDVSGSMTGLPMDVCVALGLLVSDLSDDPWRGRVITFSESPQLHHIVGEALSDKARF 517
+A+CDVSGSM G PM+VC+ALGLLVS+L+++PW+G+VITFSE+PQLH + G +L +K +F
Sbjct: 422 LAICDVSGSMAGTPMNVCIALGLLVSELNEEPWKGKVITFSENPQLHVVTGSSLREKTKF 481
Query: 518 IREMNWGMNTNFQAVFDKILEVAAGAALSPDKMVRRVVVFSDMEFDQA------------ 565
+REM++G+NT+FQ VFD+ILEVA L+ ++M++R+ VFSDMEFD A
Sbjct: 482 VREMDFGINTDFQKVFDRILEVAVENNLTDEQMIKRLFVFSDMEFDDARVDSHSEMSDYA 541
Query: 566 ------------SAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRDSKAVPVTSGQKGV 613
S + WETDYE + RKY G+ VPE+VFWNLRDS A PV S QKGV
Sbjct: 542 SNLESDYESVPESFEKWETDYEVVQRKYKEKGF-QNVPEIVFWNLRDSSATPVVSKQKGV 600
Query: 614 ALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
A+VSGFSKNLL LFL+ G+V+P VM AI G EY KL V+D
Sbjct: 601 AMVSGFSKNLLTLFLEEGGIVNPEDVMLLAIKGEEYQKLAVYD 643
>AT3G24780.1 | chr3:9049446-9051593 FORWARD LENGTH=716
Length = 715
Score = 560 bits (1444), Expect = e-160, Method: Compositional matrix adjust.
Identities = 287/616 (46%), Positives = 367/616 (59%), Gaps = 49/616 (7%)
Query: 41 NFNKPAPRKALTENLSPTFVSSGDACLDFFFHVVPGTPSXXXXXXXXXXXXXXXXXXXRL 100
+ NK +P TEN S T++SSG+ CLDFFFH+VP TP +L
Sbjct: 102 DLNKSSPAMGYTENRSATYLSSGNPCLDFFFHIVPSTPKKSLEQRLEEAWDHDSLTTLKL 161
Query: 101 VANLRGVRGTGKSDREGFYAAALWLHSHHPXXXXXXXXXXXXFGYLKDLPELLHRIVNGG 160
+ NLRGVRGTGKSD+EGFY AALWLH HP FGY KD PE+L+RI+ G
Sbjct: 162 ICNLRGVRGTGKSDKEGFYTAALWLHGRHPKTLACNLESLSKFGYFKDFPEILYRILQGP 221
Query: 161 --LSTRKPGKKARLAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHTSSRKQSRGVG 218
S +K + +AAA R +
Sbjct: 222 EIRSIQKTQRYDTIAAASLRRRSRFSRGGRGFGGGRSRGRHFLKRSAATRELRVANAERK 281
Query: 219 SAEERIAASLERDGRLXXXXXXXXXXXXXXXXXXXXXXYSRDPTYRSLHDRTADLFADLL 278
+ EE+ ASL+R + YS DP YR LH+R ++LFA+ L
Sbjct: 282 NQEEKARASLKRKQK------------KVSMAKAASTKYSNDPNYRFLHERVSELFANQL 329
Query: 279 RDDMRKLAEGNVHEFSLAAKWCPSLDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDAH 338
+ D+ L G ++ SLAAKWCPSLD S+D++TL+CE+IAR++FP+ S PE + DAH
Sbjct: 330 KRDLEFLTSGQPNKISLAAKWCPSLDSSFDKATLICESIARKIFPQESFPEYEG-VEDAH 388
Query: 339 YAYRARERLRKAALVPLRRALKLPEVYISARAWESVVYTRVASVAMKNYKDLFLKHDADR 398
YAYR R+RLRK LVPLR+ L+LPEVY+ ARAW+S+ Y RVASVAMK+YK++FL D R
Sbjct: 389 YAYRVRDRLRKQVLVPLRKTLQLPEVYMGARAWQSLPYNRVASVAMKSYKEVFLYRDEKR 448
Query: 399 FNAYLADVKSGKKKISAGALLPHQIIXXXXXXXXXXXVADLQWQRMVDDMRALGKLRNCV 458
F YL D K+GK KI+AGA+LPH+II VA+LQW+RMVDD++ G L NC+
Sbjct: 449 FQQYLNDAKTGKTKIAAGAVLPHEIIRELNGGDGGK-VAELQWKRMVDDLKEKGSLTNCM 507
Query: 459 AVCDVSGSMTGLPMDVCVALGLLVSDLSDDPWRGRVITFSESPQLHHIVGEALSDKARFI 518
A+CDVSGSM G PM+V VALGLLVS+LS++PW+G++ITF +SP+LH + G+ L K F+
Sbjct: 508 AICDVSGSMNGEPMEVSVALGLLVSELSEEPWKGKLITFRQSPELHLVKGDDLRSKTEFV 567
Query: 519 REMNWGMNTNFQAVFDKILEVAAGAALSPDKMVRRVVVFSDMEFDQASAQP--------- 569
M W MNT+FQ VFD IL+VA + L P M++RV VFSDMEFD+AS
Sbjct: 568 ESMQWDMNTDFQKVFDLILKVAVESKLKPQDMIKRVFVFSDMEFDEASTSTSSFNKWRSS 627
Query: 570 ------------------------WETDYEAIVRKYTAAGYGAAVPEVVFWNLRDSKAVP 605
W+TDY+ IVRKY GYG AVPE+VFWNLRDS++ P
Sbjct: 628 PPTPSNRWDTLSYSEDDEDEENDAWQTDYKVIVRKYREKGYGEAVPEIVFWNLRDSRSTP 687
Query: 606 VTSGQKGVALVSGFSK 621
V +KGVALVSGFSK
Sbjct: 688 VLGNKKGVALVSGFSK 703
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,485,416
Number of extensions: 416754
Number of successful extensions: 873
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 855
Number of HSP's successfully gapped: 8
Length of query: 656
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 551
Effective length of database: 8,227,889
Effective search space: 4533566839
Effective search space used: 4533566839
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)