BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0179300 Os02g0179300|AK069065
(369 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79650.4 | chr1:29972406-29975132 REVERSE LENGTH=396 427 e-120
AT1G16190.1 | chr1:5543267-5545892 FORWARD LENGTH=369 427 e-120
AT5G38470.1 | chr5:15404720-15407500 FORWARD LENGTH=379 350 5e-97
AT3G02540.1 | chr3:533095-536151 REVERSE LENGTH=420 347 5e-96
AT5G16090.1 | chr5:5255797-5257230 REVERSE LENGTH=172 81 9e-16
>AT1G79650.4 | chr1:29972406-29975132 REVERSE LENGTH=396
Length = 395
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/406 (57%), Positives = 274/406 (67%), Gaps = 53/406 (13%)
Query: 1 MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60
MKLTVKTLKG+ FEIRV P+DTIMAVKK IE+ QGKD+YP GQQLLIHNGKVLKDE++L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 ENKVSEVGFLVVMLXXXXXXXXXXXXXXXXXXXPLTRQETPADASRAAPQPLVAPTRT-- 118
ENKV+E GFLVVML + P A+ ++ +P AP+ T
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQASVQT-----SSVSQPVSATTSSTKP-AAPSTTQS 114
Query: 119 -PQPERP-PAE----------------------------APSNAYGQAASNLLSGSNLDT 148
P P P PA+ A ++ YGQAAS L+SGS+L+
Sbjct: 115 SPVPASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQ 174
Query: 149 TINQLMEMGGGSWDRDKVQRALRAAYNNPERAVEYLYSGIPITAEVAVPA-----GGQGA 203
+ Q+MEMGGGSWD++ V RALRAAYNNPERAV+YLYSGIP TAEVAVP G GA
Sbjct: 175 MVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSGA 234
Query: 204 NTTEPSSTREASLSGIPNASPLNLFPQXXXXXXXXXXXXTLEFLRHNQQFQALREMVHTN 263
P+S G PN+SPL+LFPQ TLEFLR+N QFQ LR MVH+N
Sbjct: 235 APVAPAS-------GGPNSSPLDLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSN 287
Query: 264 PQILQPMLQELSKKNPQLLRLIQENHDEFLQLINEPFDGAD--GDFLDQPDQDEMPHSIN 321
PQILQPMLQEL K+NPQLLRLIQEN EFLQL+NEP++G+D GD DQP+Q EMPH+IN
Sbjct: 288 PQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQ-EMPHAIN 346
Query: 322 VTPEEQEAIGRLEGMGFDRARVIEAFFACDRNEQLAANYLLEHAAD 367
VTP EQEAI RLE MGFDRA VIEAF ACDRNE+LAANYLLE++ D
Sbjct: 347 VTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGD 392
>AT1G16190.1 | chr1:5543267-5545892 FORWARD LENGTH=369
Length = 368
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/374 (61%), Positives = 268/374 (71%), Gaps = 16/374 (4%)
Query: 1 MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60
MKLTVKTLKG+ FEIRV P DTIMAVKK IE+ Q KD+YP GQQLLIHNGKVLKDE+TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 61 ENKVSEVGFLVVMLXXXXXXXXXXXXXXXXXXXPLTRQETPADASRAAPQPLVAPTR--T 118
ENKV+E GFLVVML + + A+ + Q + P T
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVPASNST 120
Query: 119 PQPERPPAEAPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPE 178
P E+P A+ S+ YGQAAS L+SGS+++ + Q+MEMGGGSWD++ V RALRAAYNNPE
Sbjct: 121 PVQEQPTAQ--SDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPE 178
Query: 179 RAVEYLYSGIPITAEVAVPAGGQGANTTEPSSTREASL---SGIPNASPLNLFPQXXXXX 235
RAV+YLYSGIP T V +PA N + S RE + SG PN+SPL+LFPQ
Sbjct: 179 RAVDYLYSGIPET--VTIPA----TNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSD 232
Query: 236 XXXXXXXTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEFLQL 295
TLEFLR N QFQ LR MV++NPQILQPMLQEL K+NPQLLRLIQEN EFLQL
Sbjct: 233 AAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQL 292
Query: 296 INEPFDGADG--DFLDQPDQDEMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDRN 353
+NEP++G+DG D DQPDQ EMPHS+NVTPEEQE+I RLE MGFDRA VIEAF +CDRN
Sbjct: 293 LNEPYEGSDGDVDIFDQPDQ-EMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRN 351
Query: 354 EQLAANYLLEHAAD 367
E+LAANYLLEH+AD
Sbjct: 352 EELAANYLLEHSAD 365
>AT5G38470.1 | chr5:15404720-15407500 FORWARD LENGTH=379
Length = 378
Score = 350 bits (899), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 251/394 (63%), Gaps = 53/394 (13%)
Query: 1 MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60
MK+ VKTL G+ FEI V+P D + VK IE ++G + YP +Q+LIH GKVLKDE+TLE
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59
Query: 61 ENKVSEVGFLVVMLXXXXXXXXXXXXXXXXXXXPLTRQETPADASRA-APQPLVA---PT 116
EN V E F+V+ML + +P+ AS A AP P
Sbjct: 60 ENNVVENSFIVIMLSKT--------------------KASPSGASTASAPAPSATQPQTV 99
Query: 117 RTPQPERPPAEAP-------------------SNAYGQAASNLLSGSNLDTTINQLMEMG 157
TPQ P A P ++ YGQAASNL++G+ L++T+ Q+++MG
Sbjct: 100 ATPQVSAPTASVPVPTSGTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMG 159
Query: 158 GGSWDRDKVQRALRAAYNNPERAVEYLYSGIPITAEV-----AVPAGGQGAN--TTEPSS 210
GGSWDRD V RALRAA+NNPERAVEYLYSGIP AE+ A G Q AN +
Sbjct: 160 GGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQA 219
Query: 211 TREASLSGIPNASPLNLFPQXXXXXXXXXXXXTLEFLRHNQQFQALREMVHTNPQILQPM 270
A+ +G PNA+PLNLFPQ L+FLR++QQFQALR MV NPQILQPM
Sbjct: 220 AAPAAATGGPNANPLNLFPQGMPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPM 279
Query: 271 LQELSKKNPQLLRLIQENHDEFLQLINEPFDGADGDFLDQPDQDEMPHSINVTPEEQEAI 330
LQEL K+NPQL+RLIQE+ +FL+LINEP +G + + ++Q + MP ++ VTPEE+EAI
Sbjct: 280 LQELGKQNPQLVRLIQEHQADFLRLINEPVEGEE-NVMEQLEA-AMPQAVTVTPEEREAI 337
Query: 331 GRLEGMGFDRARVIEAFFACDRNEQLAANYLLEH 364
RLEGMGFDRA V+E FFAC++NE+LAANYLL+H
Sbjct: 338 ERLEGMGFDRAMVLEVFFACNKNEELAANYLLDH 371
>AT3G02540.1 | chr3:533095-536151 REVERSE LENGTH=420
Length = 419
Score = 347 bits (891), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 194/413 (46%), Positives = 250/413 (60%), Gaps = 49/413 (11%)
Query: 1 MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60
MK+ VKTLKGT FEI V+P D+++ VKK IE +QG D YP +Q+LIH GKVLKDE+T+E
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 61 ENKVSEVGFLVVMLXXXX----------XXXXXXXXXXXXXXXPLTRQETPADASRAA-- 108
ENKV+E F+V+M+ P +TPA S
Sbjct: 61 ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120
Query: 109 -----------------------------PQPLVAPTRTPQPERPPAEAPSNAYGQAASN 139
P P + TP P+ P + + YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180
Query: 140 LLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERAVEYLYSGIPITAE---VAV 196
L +GSNL++TI Q+++MGGG+WDR+ V ALRAA+NNPERAVEYLY+GIP AE VA
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR 240
Query: 197 PAGGQGANTTEPSSTRE--ASLSGIPNASPLNLFPQXXXXXXXXXXXXTLEFLRHNQQFQ 254
P G P+ T++ A+ + PNA+PL+LFPQ TL+FLR++QQFQ
Sbjct: 241 PPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQ 300
Query: 255 ALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEFLQLINEPFDGA--DGDFLDQPD 312
ALR MV NPQ+LQPMLQEL K+NP L+RLIQ++ +FL+LINEP +G G+ L Q
Sbjct: 301 ALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMA 360
Query: 313 QD-EMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDRNEQLAANYLLEH 364
P +I VT EE+EAI RLE MGF+RA V+E FFAC++NE+LAANYLL+H
Sbjct: 361 AGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 413
>AT5G16090.1 | chr5:5255797-5257230 REVERSE LENGTH=172
Length = 171
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Query: 266 ILQPMLQELSKKNPQLLRLIQENHDEFLQLINEPFDGADGDFLDQPDQDEMPHSINVTPE 325
I + L+E+ K+NP L ++I+ N F+ ++N+ D + L QP++D + + VT
Sbjct: 74 ITKGCLEEMEKQNPPLFQMIRHNSAGFVPVLNKESFERDNE-LAQPEEDLL--QLQVTAV 130
Query: 326 EQEAIGRLEGMGFDRARVIEAFFACDRNEQLAANYLLEH 364
+ EAI RLE MGF+R V+E F AC++NEQLAAN+LL+H
Sbjct: 131 DDEAINRLEAMGFERRVVLEVFLACNKNEQLAANFLLDH 169
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 1 MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60
MK+ VKTLKG +FEI V+PND++ VKK IE + G YP QQ+LIH + L+DE+T+E
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 61 ENKVSEVGFLVVML 74
NKV + + +++
Sbjct: 61 ANKVFDKSVIAIII 74
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,351,027
Number of extensions: 301623
Number of successful extensions: 1303
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1312
Number of HSP's successfully gapped: 7
Length of query: 369
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 269
Effective length of database: 8,364,969
Effective search space: 2250176661
Effective search space used: 2250176661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 112 (47.8 bits)