BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0177300 Os02g0177300|Os02g0177300
(458 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 124 9e-29
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 113 2e-25
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 113 2e-25
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 111 8e-25
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 111 9e-25
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 110 1e-24
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 110 2e-24
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 110 2e-24
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 109 4e-24
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 107 1e-23
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 107 1e-23
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 105 4e-23
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 103 2e-22
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 102 4e-22
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 99 3e-21
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 97 3e-20
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 88 7e-18
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 60/76 (78%)
Query: 195 PRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAK 254
PRCQAEGC ADLS AKHYHRRHKVC+FH G QRFCQQCSRFH+L+EFD K
Sbjct: 186 PRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGK 245
Query: 255 RSCRKRLTEHNRRRRK 270
RSCRKRL +HNRRRRK
Sbjct: 246 RSCRKRLADHNRRRRK 261
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%)
Query: 195 PRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAK 254
P+CQ + CK DLS AK YHRRHKVC+ H + QRFCQQCSRFH+L+EFDE K
Sbjct: 80 PKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGK 139
Query: 255 RSCRKRLTEHNRRRRK 270
RSCR+RL HNRRRRK
Sbjct: 140 RSCRRRLDGHNRRRRK 155
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%)
Query: 193 QPPRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDE 252
Q P CQ EGC DLS+AK YHR+H++C+ H G ++RFCQQCSRFH L+EFDE
Sbjct: 165 QTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDE 224
Query: 253 AKRSCRKRLTEHNRRRRKPTAG 274
KRSCR+RL++HN RRRKP G
Sbjct: 225 KKRSCRRRLSDHNARRRKPNPG 246
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%)
Query: 193 QPPRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDE 252
Q PRCQ +GC+ DLS++K YHR+H+VC+ H G ++RFCQQCSRFH ++EFDE
Sbjct: 172 QVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDE 231
Query: 253 AKRSCRKRLTEHNRRRRKP 271
KRSCRKRL+ HN RRRKP
Sbjct: 232 KKRSCRKRLSHHNARRRKP 250
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 195 PRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAK 254
PRCQ +GC+ DLS+AK YHR+HKVC+ H G ++RFCQQCSRFH ++EFDE K
Sbjct: 173 PRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKK 232
Query: 255 RSCRKRLTEHNRRRRKP 271
RSCRKRL+ HN RRRKP
Sbjct: 233 RSCRKRLSHHNARRRKP 249
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 55/78 (70%)
Query: 195 PRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAK 254
P CQ + C DLS AK YHRRHKVC+ H + QRFCQQCSRFH+L+EFDE K
Sbjct: 118 PMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGK 177
Query: 255 RSCRKRLTEHNRRRRKPT 272
RSCR+RL HNRRRRK T
Sbjct: 178 RSCRRRLAGHNRRRRKTT 195
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 55/80 (68%)
Query: 192 HQPPRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFD 251
+Q P C +GC +D S + YH+RHKVCD H G +QRFCQQCSRFH L EFD
Sbjct: 96 NQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFD 155
Query: 252 EAKRSCRKRLTEHNRRRRKP 271
E KRSCRKRL HNRRRRKP
Sbjct: 156 EGKRSCRKRLDGHNRRRRKP 175
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 55/80 (68%)
Query: 192 HQPPRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFD 251
+Q P C +GC +D S + YH+RHKVCD H G +QRFCQQCSRFH L EFD
Sbjct: 96 NQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFD 155
Query: 252 EAKRSCRKRLTEHNRRRRKP 271
E KRSCRKRL HNRRRRKP
Sbjct: 156 EGKRSCRKRLDGHNRRRRKP 175
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 53/74 (71%)
Query: 197 CQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKRS 256
CQ E C+ADLS K YHRRHKVC+ H G QRFCQQCSRFH+L EFDE KRS
Sbjct: 106 CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRS 165
Query: 257 CRKRLTEHNRRRRK 270
CR+RL HN+RRRK
Sbjct: 166 CRRRLAGHNKRRRK 179
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%)
Query: 193 QPPRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDE 252
Q P CQ GC DLS++K YH+RH+VC+ H G +QRFCQQCSRFH L+EFD+
Sbjct: 120 QNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDD 179
Query: 253 AKRSCRKRLTEHNRRRRKP 271
KRSCR+RL HN RRRKP
Sbjct: 180 GKRSCRRRLAGHNERRRKP 198
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 52/74 (70%)
Query: 197 CQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKRS 256
CQ + C ADLS K YHRRHKVC+ H G QRFCQQCSRFHVL EFDE KRS
Sbjct: 127 CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRS 186
Query: 257 CRKRLTEHNRRRRK 270
CR+RL HN+RRRK
Sbjct: 187 CRRRLAGHNKRRRK 200
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 54/77 (70%)
Query: 197 CQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKRS 256
CQ E C AD+S AK YH+RHKVC FH G QRFCQQCSRFH L+EFDEAKRS
Sbjct: 54 CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRS 113
Query: 257 CRKRLTEHNRRRRKPTA 273
CR+RL HN RRRK T
Sbjct: 114 CRRRLAGHNERRRKSTT 130
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 52/77 (67%)
Query: 195 PRCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAK 254
PRCQ EGC DL+ AK Y+ RH+VC H G +QRFCQQCSRFH L EFD K
Sbjct: 72 PRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEK 131
Query: 255 RSCRKRLTEHNRRRRKP 271
RSCR+RL HN RRRKP
Sbjct: 132 RSCRRRLAGHNERRRKP 148
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 51/76 (67%)
Query: 196 RCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKR 255
RCQ EGC+ DLS K Y+ RHKVC H G QRFCQQCSRFH L+EFD KR
Sbjct: 58 RCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKR 117
Query: 256 SCRKRLTEHNRRRRKP 271
SCR+RL HN RRRKP
Sbjct: 118 SCRRRLACHNERRRKP 133
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 52/76 (68%)
Query: 197 CQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKRS 256
CQ + C AD+ AK YHRRHKVC+ H G QRFCQQCSRFH L EFDEAKRS
Sbjct: 54 CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRS 113
Query: 257 CRKRLTEHNRRRRKPT 272
CR+RL HN RRRK +
Sbjct: 114 CRRRLAGHNERRRKSS 129
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 197 CQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKRS 256
CQ + C +L+ AK Y+RRH+VC+ H G +QRFCQQCSRFH L EFDEAKRS
Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRS 122
Query: 257 CRKRLTEHNRRRRK 270
CR+RL HN RRRK
Sbjct: 123 CRRRLAGHNERRRK 136
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 196 RCQAEGCKADLSAAKHYHRRHKVCDFHXXXXXXXXXGKQQRFCQQCSRFHVLAEFDEAKR 255
RCQ C+AD+S K YH+RH+VC G+ +R+CQQC +FH+L +FDE KR
Sbjct: 137 RCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKR 196
Query: 256 SCRKRLTEH-NRRRRKPTAGG 275
SCR++L H NRR+RKP G
Sbjct: 197 SCRRKLERHNNRRKRKPVDKG 217
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,600,377
Number of extensions: 145079
Number of successful extensions: 210
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 208
Number of HSP's successfully gapped: 17
Length of query: 458
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 356
Effective length of database: 8,310,137
Effective search space: 2958408772
Effective search space used: 2958408772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)