BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0174100 Os02g0174100|AK066057
(251 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 134 6e-32
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 128 4e-30
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 120 6e-28
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 105 3e-23
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 104 4e-23
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 103 1e-22
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 101 4e-22
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 100 7e-22
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 100 7e-22
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 100 1e-21
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 99 2e-21
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 98 5e-21
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 98 5e-21
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 97 1e-20
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 96 1e-20
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 89 2e-18
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 77 8e-15
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 75/116 (64%), Gaps = 12/116 (10%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L KDYHRKHR+CE HSKFP+VVV+G ERRFCQQCSRFH LSEFD+KKRSCRRRL DHN
Sbjct: 178 LSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHN 237
Query: 137 ARRRKPQTDVFSYASARPPSSLLFDDNRQISFVWNKAPLSHVRPFAISPWESSSEV 192
ARRRKP +D Q+ FVWN+ L H R W SS V
Sbjct: 238 ARRRKPNP------------GRTYDGKPQVDFVWNRFALIHPRSEEKFIWPSSKHV 281
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 73/100 (73%), Gaps = 6/100 (6%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L KDYHRKHRVCE HSK P+VVV+G ERRFCQQCSRFHA+SEFD+KKRSCR+RL HN
Sbjct: 185 LSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHN 244
Query: 137 ARRRKPQTDVFSYASARPPSSLLFDDNRQISFVWNKAPLS 176
ARRRKPQ VF S R +FD + S +WN L+
Sbjct: 245 ARRRKPQ-GVFPLNSER-----VFDRRQHTSMLWNGLSLN 278
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L K YHRKH+VCE HSK P+V V+G ERRFCQQCSRFHA+SEFD+KKRSCR+RL HN
Sbjct: 184 LSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHN 243
Query: 137 ARRRKPQTDVFSYASARPPSSLLFDDNRQISFVWNKAPLS 176
ARRRKPQ VFS R ++D + + +WN L+
Sbjct: 244 ARRRKPQ-GVFSMNPER-----VYDRRQHTNMLWNGVSLN 277
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 52/66 (78%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L KDYH++HRVCEAHSK V+V G E+RFCQQCSRFH LSEFD KRSCRRRL HN
Sbjct: 133 LSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHN 192
Query: 137 ARRRKP 142
RRRKP
Sbjct: 193 ERRRKP 198
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 55/77 (71%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L K Y+ +HRVC HSK P+V VAG E+RFCQQCSRFH L EFD +KRSCRRRL HN
Sbjct: 83 LTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHN 142
Query: 137 ARRRKPQTDVFSYASAR 153
RRRKPQ S ++R
Sbjct: 143 ERRRKPQPASLSVLASR 159
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 52/69 (75%)
Query: 80 VKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARR 139
KDYHR+H+VCE HSK + +V Q +RFCQQCSRFH LSEFD+ KRSCRRRL HN RR
Sbjct: 94 AKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRR 153
Query: 140 RKPQTDVFS 148
RK Q D +
Sbjct: 154 RKTQPDAIT 162
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 52/76 (68%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L VKDYHR+H+VCE HSK +V G +RFCQQCSRFH L EFD+ KRSCRRRL HN
Sbjct: 136 LSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHN 195
Query: 137 ARRRKPQTDVFSYASA 152
RRRK D ++
Sbjct: 196 KRRRKANPDTIGNGTS 211
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 81 KDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARRR 140
++YH++H+VC+ HSK P V + G ++RFCQQCSRFHAL EFD+ KRSCR+RL HN RRR
Sbjct: 114 REYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRR 173
Query: 141 KPQTD 145
KPQ +
Sbjct: 174 KPQPE 178
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 81 KDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARRR 140
++YH++H+VC+ HSK P V + G ++RFCQQCSRFHAL EFD+ KRSCR+RL HN RRR
Sbjct: 114 REYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRR 173
Query: 141 KPQTD 145
KPQ +
Sbjct: 174 KPQPE 178
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 49/62 (79%)
Query: 80 VKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARR 139
KDYHR+H+VCE HSK + +V Q +RFCQQCSRFH LSEFD+ KRSCRRRL HN RR
Sbjct: 132 AKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRR 191
Query: 140 RK 141
RK
Sbjct: 192 RK 193
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 61/101 (60%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L K Y+R+HRVCE H+K VAG +RFCQQCSRFH L EFD+ KRSCRRRL HN
Sbjct: 72 LTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHN 131
Query: 137 ARRRKPQTDVFSYASARPPSSLLFDDNRQISFVWNKAPLSH 177
RRRK D F S R S ++ + V K P+++
Sbjct: 132 ERRRKISGDSFGEGSGRRGFSGQLIQTQERNRVDRKLPMTN 172
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L VK Y+ +H+VC HSK +V+V+G +RFCQQCSRFH LSEFD +KRSCRRRL HN
Sbjct: 68 LSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRSCRRRLACHN 127
Query: 137 ARRRKPQ--TDVFSYASARPPSSLLFDDN 163
RRRKPQ T +F+ +R SL + N
Sbjct: 128 ERRRKPQPTTALFTSHYSRIAPSLYGNPN 156
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 48/65 (73%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L VKDYHR+H+VCE HSK V G +RFCQQCSRFH L EFD+ KRSCRRRL HN
Sbjct: 115 LSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHN 174
Query: 137 ARRRK 141
RRRK
Sbjct: 175 KRRRK 179
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 49/65 (75%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
L K YHR+H+VCE HSK VV AG +RFCQQCSRFH LSEFD KRSCR+RL DHN
Sbjct: 197 LSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHN 256
Query: 137 ARRRK 141
RRRK
Sbjct: 257 RRRRK 261
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 77 LVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHN 136
+ K YH++H+VC+ H+K P V ++G +RFCQQCSRFHALSEFD+ KRSCRRRL HN
Sbjct: 63 MSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHN 122
Query: 137 ARRRKPQTD 145
RRRK TD
Sbjct: 123 ERRRKSTTD 131
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 80 VKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARR 139
K YHR+H+VCE H+K V ++G +RFCQQCSRFH L EFD+ KRSCRRRL HN RR
Sbjct: 66 AKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERR 125
Query: 140 RKPQTD-VFSYASAR 153
RK + + S R
Sbjct: 126 RKSSGESTYGEGSGR 140
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 80 VKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARR 139
+K YH++HRVC + VV+ G+ +R+CQQC +FH L +FD+ KRSCRR+L HN RR
Sbjct: 150 LKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRR 209
Query: 140 RKPQTDVFSYASAR 153
++ D A+ +
Sbjct: 210 KRKPVDKGGVAAEQ 223
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.135 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,416,141
Number of extensions: 169832
Number of successful extensions: 523
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 522
Number of HSP's successfully gapped: 17
Length of query: 251
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 155
Effective length of database: 8,474,633
Effective search space: 1313568115
Effective search space used: 1313568115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 110 (47.0 bits)