BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0170500 Os02g0170500|J090080H23
(259 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56170.1 | chr1:21025118-21025717 FORWARD LENGTH=200 221 3e-58
AT1G08970.4 | chr1:2883144-2883839 FORWARD LENGTH=232 210 5e-55
AT1G54830.2 | chr1:20451672-20452325 FORWARD LENGTH=218 203 8e-53
AT5G63470.1 | chr5:25416037-25417084 REVERSE LENGTH=251 202 2e-52
AT3G48590.1 | chr3:18008893-18009938 REVERSE LENGTH=235 201 3e-52
AT5G50480.1 | chr5:20557856-20558464 REVERSE LENGTH=203 146 1e-35
AT5G27910.1 | chr5:9940736-9941299 REVERSE LENGTH=188 122 1e-28
AT5G50490.1 | chr5:20560610-20561170 REVERSE LENGTH=187 115 3e-26
AT5G50470.1 | chr5:20555120-20555758 REVERSE LENGTH=213 114 5e-26
AT5G38140.1 | chr5:15220377-15222025 REVERSE LENGTH=196 102 2e-22
AT3G12480.1 | chr3:3958065-3960278 FORWARD LENGTH=294 61 6e-10
AT5G43250.1 | chr5:17356174-17356566 REVERSE LENGTH=131 54 1e-07
AT5G19490.1 | chr5:6576769-6578273 REVERSE LENGTH=265 50 1e-06
>AT1G56170.1 | chr1:21025118-21025717 FORWARD LENGTH=200
Length = 199
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/147 (73%), Positives = 125/147 (85%), Gaps = 8/147 (5%)
Query: 87 FWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLR 146
FWANQM+EIE TTDFKNH+LPLARIKKIMKADEDVRMISAEAPV+FAKACE+FILELTLR
Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 117
Query: 147 SWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPNVGGAA 206
+W+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRDE+KEEGLG+ + +P VG
Sbjct: 118 AWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGTIPSVVGSP- 176
Query: 207 DTYPYYYVPAQQGPGSGMMYGGQQGHP 233
PYYY+ QQG M + Q+ HP
Sbjct: 177 ---PYYYL-QQQG---MMQHWPQEQHP 196
>AT1G08970.4 | chr1:2883144-2883839 FORWARD LENGTH=232
Length = 231
Score = 210 bits (535), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/148 (72%), Positives = 122/148 (82%), Gaps = 6/148 (4%)
Query: 87 FWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLR 146
FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA+ACE+FILELTLR
Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 121
Query: 147 SWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLG-LPRVGLPPNVGGA 205
SW HTEENKRRTLQKNDIAAA+TRTDI+DFLVDIVPR+++++E LG +PR +P A
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPE---AA 178
Query: 206 ADTYPYYYVPAQQGP--GSGMMYGGQQG 231
A YPY Y+PA P GM+ G G
Sbjct: 179 AAGYPYGYLPAGTAPIGNPGMVMGNPGG 206
>AT1G54830.2 | chr1:20451672-20452325 FORWARD LENGTH=218
Length = 217
Score = 203 bits (516), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 118/152 (77%), Gaps = 13/152 (8%)
Query: 87 FWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLR 146
FW Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA+ACE+FILELTLR
Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 111
Query: 147 SWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPNVGGAA 206
SW HTEENKRRTLQKNDIAAA+TRTDI+DFLVDIVPR+++++E LG VG A
Sbjct: 112 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG--------GVGAEA 163
Query: 207 DT---YPYYYVPAQQGP--GSGMMYGGQQGHP 233
T YPY Y+P P GM+ G +P
Sbjct: 164 ATAAGYPYGYLPPGTAPIGNPGMVMGNPGAYP 195
>AT5G63470.1 | chr5:25416037-25417084 REVERSE LENGTH=251
Length = 250
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 113/143 (79%), Gaps = 3/143 (2%)
Query: 87 FWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLR 146
FW Q +EIEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 119
Query: 147 SWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPNVGGAA 206
SW+H EENKRRTLQKNDIAAAITRTDI+DFLVDIVPR+E+KEE +G V AA
Sbjct: 120 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAA 179
Query: 207 DTYPYYYVPAQQG--PGSGMMYG 227
PYYY P Q PG GMM G
Sbjct: 180 SGVPYYYPPMGQPAVPG-GMMIG 201
>AT3G48590.1 | chr3:18008893-18009938 REVERSE LENGTH=235
Length = 234
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/143 (72%), Positives = 113/143 (79%), Gaps = 6/143 (4%)
Query: 87 FWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLR 146
FW Q +EIEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106
Query: 147 SWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPNVGGAA 206
SW+H EENKRRTLQKNDIAAAITRTDI+DFLVDIVPRDE+K+E L G V A
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVL---GGGMVVAPTA 163
Query: 207 DTYPYYYVPAQQ--GPGSGMMYG 227
PYYY P Q GPG GMM G
Sbjct: 164 SGVPYYYPPMGQPAGPG-GMMIG 185
>AT5G50480.1 | chr5:20557856-20558464 REVERSE LENGTH=203
Length = 202
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 102/157 (64%), Gaps = 15/157 (9%)
Query: 85 REFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELT 144
R +W QME + +DFKN LPLARIKKIMKAD DV M+SAEAP++FAKACE+FI++LT
Sbjct: 37 RNYWIEQMETV---SDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLT 93
Query: 145 LRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDE-MKEEGLGLPRVGLP-PNV 202
+RSW+ EENKR TLQK+DI+ A+ + YDFL+D+VP+DE + G V +P P+
Sbjct: 94 MRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDESIATADPGF--VAMPHPDG 151
Query: 203 GGAADTYPYYYVPAQQGPGSGM----MYGGQQGHPVT 235
GG P YY P G+ M MY Q P
Sbjct: 152 GGV----PQYYYPPGVVMGTPMVGSGMYAPSQAWPAA 184
>AT5G27910.1 | chr5:9940736-9941299 REVERSE LENGTH=188
Length = 187
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 76/95 (80%), Gaps = 3/95 (3%)
Query: 85 REFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELT 144
+ FW+ +ME DFKNH LP+ RIKKIMK D DV MI++EAP++ +KACE+FI++LT
Sbjct: 19 KSFWSKEME---GNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLT 75
Query: 145 LRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVD 179
+RSW+H +E+KR TLQK+++ AA+ +T I+DFL+D
Sbjct: 76 MRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
>AT5G50490.1 | chr5:20560610-20561170 REVERSE LENGTH=187
Length = 186
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 76/101 (75%), Gaps = 3/101 (2%)
Query: 85 REFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELT 144
+ FW+ ME + KNH P++RIK+IMK D DV MI+AEAP + +KACE+F+++LT
Sbjct: 19 KSFWSKGME---GDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLT 75
Query: 145 LRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDE 185
+RSW+H +E+ R T++K+D+ A +++T I+DFL D VP+DE
Sbjct: 76 MRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKDE 116
>AT5G50470.1 | chr5:20555120-20555758 REVERSE LENGTH=213
Length = 212
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 76/106 (71%), Gaps = 9/106 (8%)
Query: 85 REFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELT 144
R +W QM TD K+H+ PL RIKKIMK++ +V M++AEAPV+ +KACE+ IL+LT
Sbjct: 46 RNYWIAQMG---NATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLT 102
Query: 145 LRSWMHTEENKRRTLQ------KNDIAAAITRTDIYDFLVDIVPRD 184
+RSW+HT E R+TL+ ++DI+AA TR+ + FL D+VPRD
Sbjct: 103 MRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
>AT5G38140.1 | chr5:15220377-15222025 REVERSE LENGTH=196
Length = 195
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 87 FWANQMEEIEQTTDFKNHS-LPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTL 145
FW NQ E Q +F + LPL+R++KI+K+D +V+ IS + P +F+KACE FILE+TL
Sbjct: 51 FWNNQRE---QLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTL 107
Query: 146 RSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVP 182
R+WMHT+ R T+++ DI A+ + YDFL+D VP
Sbjct: 108 RAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVP 144
>AT3G12480.1 | chr3:3958065-3960278 FORWARD LENGTH=294
Length = 293
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 106 LPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIA 165
P ARIKKIM+ADEDV I+ PV+ +K+ E+F+ +L R++ T E +T+ +
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68
Query: 166 AAITRTDIYDFLVDIVPR 183
+ R +++DFL ++V +
Sbjct: 69 HCVERYNVFDFLREVVSK 86
>AT5G43250.1 | chr5:17356174-17356566 REVERSE LENGTH=131
Length = 130
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 106 LPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIA 165
P+ R+KKIMK D+D+ I++EA V + E+F+ L +S + T E KR+T+ + +
Sbjct: 12 FPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNLDHLR 71
Query: 166 AAITRTD-IYDFLVDIVP 182
A+ R DFL+D +P
Sbjct: 72 IAVKRHQPTSDFLLDSLP 89
>AT5G19490.1 | chr5:6576769-6578273 REVERSE LENGTH=265
Length = 264
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 106 LPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIA 165
P RIKKIM+ DE+V I+ P++ +KA E+F+ +L ++ T +T+ +
Sbjct: 9 FPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNAFHLK 68
Query: 166 AAITRTDIYDFLVDIVPR 183
+ T+++DFL D V +
Sbjct: 69 QCVQATNVFDFLRDTVAK 86
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,370,487
Number of extensions: 162016
Number of successful extensions: 376
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 374
Number of HSP's successfully gapped: 13
Length of query: 259
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 163
Effective length of database: 8,474,633
Effective search space: 1381365179
Effective search space used: 1381365179
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)