BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0169300 Os02g0169300|AK070041
         (402 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79550.1  | chr1:29924347-29926295 REVERSE LENGTH=402          622   e-178
AT1G56190.1  | chr1:21028403-21030454 FORWARD LENGTH=479          601   e-172
AT3G12780.1  | chr3:4061127-4063140 REVERSE LENGTH=482            598   e-171

>AT1G79550.1 | chr1:29924347-29926295 REVERSE LENGTH=402
          Length = 401

 Score =  622 bits (1604), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 317/402 (78%), Positives = 340/402 (84%), Gaps = 1/402 (0%)

Query: 1   MATKRSVGTLGEADLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAKVI 60
           MATKRSVGTL EADL+GK VFVR DLNVPLDD   ITDDTRIRA+VPT+K+L+  G++V+
Sbjct: 1   MATKRSVGTLKEADLKGKSVFVRVDLNVPLDDNSNITDDTRIRAAVPTIKYLMGNGSRVV 60

Query: 61  LASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLEN 120
           L SHLGRPKGVTPKYSLKPLVPRLSELLGV+VVMAND IGEEV+KL A LPEGGVLLLEN
Sbjct: 61  LCSHLGRPKGVTPKYSLKPLVPRLSELLGVEVVMANDSIGEEVQKLVAGLPEGGVLLLEN 120

Query: 121 VRFYKEEEKNDPEFAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKEL 180
           VRFY EEEKNDPEFAKKLAA+AD+YVNDAFGTAHRAHASTEGV KFLKP+VAGFLMQKEL
Sbjct: 121 VRFYAEEEKNDPEFAKKLAALADVYVNDAFGTAHRAHASTEGVAKFLKPSVAGFLMQKEL 180

Query: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGMIFTFYKAQGYAVGK 240
           DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLL  VD+L+LGGGMIFTFYKAQG +VG 
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLNTVDILLLGGGMIFTFYKAQGLSVGS 240

Query: 241 SLVEEDKLELATSLIEKAKAKGVSLLLPTXXXXXXXXXXXXESKTVAASAIPDGWMGLDV 300
           SLVEEDKL+LA SL+EKAKAKGVSLLLPT             SK V A+AIPDGWMGLD+
Sbjct: 241 SLVEEDKLDLAKSLMEKAKAKGVSLLLPTDVVIADKFAPDANSKIVPATAIPDGWMGLDI 300

Query: 301 GPDAIKTSSEALDTCNTIIWNGPMGVFEFEKFAAGTDXXXXXXXXXXXXXXXXXXXXXXX 360
           GPD+IKT SEALDT  TIIWNGPMGVFEF+KFAAGT+                       
Sbjct: 301 GPDSIKTFSEALDTTKTIIWNGPMGVFEFDKFAAGTE-AVAKQLAELSGKGVTTIIGGGD 359

Query: 361 SVAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALDEA 402
           SVAAVEK GLADKMSHISTGGGASLELLEGK LPGVLALDEA
Sbjct: 360 SVAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401



>AT1G56190.1 | chr1:21028403-21030454 FORWARD LENGTH=479
          Length = 478

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 300/399 (75%), Positives = 336/399 (84%), Gaps = 1/399 (0%)

Query: 4   KRSVGTLGEADLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAKVILAS 63
           K+SVG L   DL+GKKVFVRADLNVPLDD Q ITDDTRIRA++PT+KFL+E GAKVIL++
Sbjct: 76  KKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILST 135

Query: 64  HLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLENVRF 123
           HLGRPKGVTPK+SL PLVPRLSELLG++VV A+DCIG EVE L A+LPEGGVLLLENVRF
Sbjct: 136 HLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRF 195

Query: 124 YKEEEKNDPEFAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKELDYL 183
           YKEEEKN+P+FAKKLA++ADLYVNDAFGTAHRAHASTEGVTKFLKP+VAGFL+QKELDYL
Sbjct: 196 YKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYL 255

Query: 184 VGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGMIFTFYKAQGYAVGKSLV 243
           VGAV+NPK+PFAAIVGGSKVS+KIGVIESLL K D+L+LGGGMIFTFYKAQG +VG SLV
Sbjct: 256 VGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLV 315

Query: 244 EEDKLELATSLIEKAKAKGVSLLLPTXXXXXXXXXXXXESKTVAASAIPDGWMGLDVGPD 303
           EEDKLELAT+L+ KAKA+GVSLLLPT             SK V ASAIPDGWMGLD+GPD
Sbjct: 316 EEDKLELATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPD 375

Query: 304 AIKTSSEALDTCNTIIWNGPMGVFEFEKFAAGTDXXXXXXXXXXXXXXXXXXXXXXXSVA 363
           ++KT +EALDT  T+IWNGPMGVFEFEKFA GT+                       SVA
Sbjct: 376 SVKTFNEALDTTQTVIWNGPMGVFEFEKFAKGTE-AVANKLAELSKKGVTTIIGGGDSVA 434

Query: 364 AVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALDEA 402
           AVEK G+A  MSHISTGGGASLELLEGK LPGV+ALDEA
Sbjct: 435 AVEKVGVAGVMSHISTGGGASLELLEGKVLPGVVALDEA 473



>AT3G12780.1 | chr3:4061127-4063140 REVERSE LENGTH=482
          Length = 481

 Score =  598 bits (1543), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/399 (75%), Positives = 333/399 (83%), Gaps = 1/399 (0%)

Query: 4   KRSVGTLGEADLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAKVILAS 63
           K+SVG L  ADL+GKKVFVRADLNVPLDD Q ITDDTRIRA++PT+K+L+E GAKVIL++
Sbjct: 79  KKSVGDLTSADLKGKKVFVRADLNVPLDDNQTITDDTRIRAAIPTIKYLIENGAKVILST 138

Query: 64  HLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLENVRF 123
           HLGRPKGVTPK+SL PLVPRLSELLG++V  A+DCIG EVE L A+LPEGGVLLLENVRF
Sbjct: 139 HLGRPKGVTPKFSLAPLVPRLSELLGIEVTKADDCIGPEVESLVASLPEGGVLLLENVRF 198

Query: 124 YKEEEKNDPEFAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKELDYL 183
           YKEEEKNDPEFAKKLA++ADLYVNDAFGTAHRAHASTEGVTKFLKP+VAGFL+QKELDYL
Sbjct: 199 YKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYL 258

Query: 184 VGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGMIFTFYKAQGYAVGKSLV 243
           VGAV+NPK+PFAAIVGGSKVS+KIGVIESLL K D+L+LGGGMIFTFYKAQG +VG SLV
Sbjct: 259 VGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLV 318

Query: 244 EEDKLELATSLIEKAKAKGVSLLLPTXXXXXXXXXXXXESKTVAASAIPDGWMGLDVGPD 303
           EEDKLELAT L+ KAKAKGVSLLLPT             SK V AS I DGWMGLD+GPD
Sbjct: 319 EEDKLELATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPD 378

Query: 304 AIKTSSEALDTCNTIIWNGPMGVFEFEKFAAGTDXXXXXXXXXXXXXXXXXXXXXXXSVA 363
           +IKT +EALDT  T+IWNGPMGVFE EKFAAGT+                       SVA
Sbjct: 379 SIKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTE-AIANKLAELSEKGVTTIIGGGDSVA 437

Query: 364 AVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALDEA 402
           AVEK G+A  MSHISTGGGASLELLEGK LPGV+ALDEA
Sbjct: 438 AVEKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDEA 476



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.134    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,407,842
Number of extensions: 278169
Number of successful extensions: 504
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 501
Number of HSP's successfully gapped: 3
Length of query: 402
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 301
Effective length of database: 8,337,553
Effective search space: 2509603453
Effective search space used: 2509603453
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)