BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0168700 Os02g0168700|AK061562
(213 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230 252 8e-68
AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257 71 5e-13
AT4G26555.1 | chr4:13404622-13406178 REVERSE LENGTH=208 67 5e-12
AT5G48570.1 | chr5:19690746-19693656 REVERSE LENGTH=579 64 6e-11
AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231 63 1e-10
AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243 62 2e-10
AT3G25230.2 | chr3:9188257-9191175 FORWARD LENGTH=563 61 6e-10
AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144 55 2e-08
AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500 55 3e-08
AT4G25340.1 | chr4:12959657-12962632 REVERSE LENGTH=478 55 3e-08
AT1G18170.1 | chr1:6254291-6255507 FORWARD LENGTH=248 53 1e-07
AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224 52 3e-07
AT3G25220.1 | chr3:9182691-9184463 FORWARD LENGTH=154 52 3e-07
AT5G48580.1 | chr5:19696156-19697304 REVERSE LENGTH=164 51 5e-07
AT3G55520.1 | chr3:20594177-20595128 FORWARD LENGTH=191 48 4e-06
>AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230
Length = 229
Score = 252 bits (644), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 116/145 (80%), Positives = 131/145 (90%)
Query: 67 EIPGSGGVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFV 126
EIP SGGVKALDLR G G+VP +GDQ+ IHYYGRLAAKQGWRFDSTYDHKD G+ +PF
Sbjct: 82 EIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNGEAVPFT 141
Query: 127 FTVGAGNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNP 186
F +G+ VIPGIE AV+SM+VGG+RRV+IPPSQGYQNTSQEP+PPNFFDRQRLFTTIFNP
Sbjct: 142 FVLGSSKVIPGIETAVRSMKVGGIRRVVIPPSQGYQNTSQEPLPPNFFDRQRLFTTIFNP 201
Query: 187 TRLANGEGSTLGTLIFDIELISIRQ 211
TRLANGEGSTLGTL+FDIEL+S R+
Sbjct: 202 TRLANGEGSTLGTLVFDIELVSTRR 226
>AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257
Length = 256
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 73 GVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKD---ETGDPMPFVFTV 129
G++ DLR G G + GD+V + + G G F++ K E D F FT+
Sbjct: 118 GLQYKDLRVGTGPIAKKGDKVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKEFFKFTL 177
Query: 130 GAGNVIPGIEAAVKSMRVGGLRRVIIPPSQGY-QNTSQEPIP-PNFFDRQRLFTTIFNPT 187
G+ VIP E AV M +GG+RR+I+PP GY N + P P F QR +
Sbjct: 178 GSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMTFSGQRALDFVLRNQ 237
Query: 188 RLANGEGSTLGTLIFDIELISI 209
L + TL+FD+EL+ I
Sbjct: 238 GLID------KTLLFDVELLKI 253
>AT4G26555.1 | chr4:13404622-13406178 REVERSE LENGTH=208
Length = 207
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Query: 73 GVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAG 132
GV+ ++ EG G +GD V ++Y R A G+ ST D +G+ P +
Sbjct: 87 GVRYQEIIEGEGREAHEGDLVELNYVCRRA--NGYFVHSTVDQF--SGESSPVKLILDEN 142
Query: 133 NVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANG 192
+VI G++ + M+ GG RR +IPPS GY N + +PIP F R+ L + P
Sbjct: 143 DVIEGLKEVLVGMKAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEP------ 196
Query: 193 EGSTLGTLIFDIELISI 209
L+F+I+L+ +
Sbjct: 197 -------LVFEIQLLKV 206
>AT5G48570.1 | chr5:19690746-19693656 REVERSE LENGTH=579
Length = 578
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 63/145 (43%), Gaps = 34/145 (23%)
Query: 67 EIPGSGGVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFV 126
EI SG K L + P +GD+V +HY G L G +FDS+ D PF
Sbjct: 42 EIGKSGLKKKLVKECEKWDTPENGDEVEVHYTGTLL--DGTKFDSSRDR------GTPFK 93
Query: 127 FTVGAGNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEP-IPPNFFDRQRLFTTIFN 185
FT+G G+VI G + +K+M+ G IPP Y T P IPPN
Sbjct: 94 FTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYGETGSPPTIPPN------------- 140
Query: 186 PTRLANGEGSTLGTLIFDIELISIR 210
TL FD+ELI+ R
Sbjct: 141 ------------ATLQFDVELIAWR 153
>AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231
Length = 230
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 64/142 (45%), Gaps = 32/142 (22%)
Query: 73 GVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGA- 131
G+K D++ G G G +VA+HY +A +G F T G P+ F VG
Sbjct: 106 GLKYYDIKVGNGAEAVKGSRVAVHY---VAKWKGITF-MTSRQGLGVGGGTPYGFDVGQS 161
Query: 132 --GNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRL 189
GNV+ G++ V+ MRVGG R VI+PP Y + IPPN
Sbjct: 162 ERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQEIPPN----------------- 204
Query: 190 ANGEGSTLGTLIFDIELISIRQ 211
T+ DIEL+SI+Q
Sbjct: 205 --------ATIELDIELLSIKQ 218
>AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243
Length = 242
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 33/144 (22%)
Query: 68 IPGSGGVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVF 127
I G+ D G G+ P DG QV HY G + G R DSTY P
Sbjct: 116 IKADSGLIYRDFNVGQGDFPKDGQQVTFHYIG--YNESGRRIDSTYIQGS------PARI 167
Query: 128 TVGAGNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPT 187
+G ++PG E ++ M+ GG RR+IIPP G P+ P+ F + F
Sbjct: 168 RMGTNALVPGFEMGIRDMKPGGRRRIIIPPELG------PPVGPSTFFSSKQFE------ 215
Query: 188 RLANGEGSTLGTLIFDIELISIRQ 211
+FD+EL+SI+
Sbjct: 216 -------------VFDVELLSIQN 226
>AT3G25230.2 | chr3:9188257-9191175 FORWARD LENGTH=563
Length = 562
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 73 GVKALDLREGPG-EVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGA 131
G+K L+EG G E P +GD+V +HY G L G +FDS+ D PF FT+G
Sbjct: 39 GLKKKLLKEGEGYETPENGDEVEVHYTGTLL--DGTKFDSSRDR------ATPFKFTLGQ 90
Query: 132 GNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEP-IPPN 172
G VI G + +K+M+ G IP Y + P IP N
Sbjct: 91 GQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPAN 132
>AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144
Length = 143
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 33/121 (27%)
Query: 90 GDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAGNVIPGIEAAVKSMRVGG 149
G +V++HY G+L G FDST + F + AG VI G++ + M VGG
Sbjct: 56 GKRVSVHYTGKLQG-NGKIFDSTVGKSR-------YKFRLDAGKVIKGLDVGLNGMLVGG 107
Query: 150 LRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELISI 209
R++ IPP GY IPP+ + L+FD+EL+++
Sbjct: 108 KRKLTIPPEMGYGAEGAGSIPPDSW-------------------------LVFDVELLNV 142
Query: 210 R 210
+
Sbjct: 143 K 143
>AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500
Length = 499
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 71 SGGVKALDLREGP--GEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFT 128
S GV D+ +G G+ G +V+I Y G+L G FDS P F
Sbjct: 390 SNGVIIEDIEKGKLDGKSAVKGKKVSILYTGKLK-DTGNLFDSNLGED-------PLRFR 441
Query: 129 VGAGNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTS-QEPIPPNFF 174
+G NVI G+ V+ MRVG RR+IIPP+ GY +E +P + +
Sbjct: 442 LGGENVIEGLSIGVEGMRVGDKRRLIIPPALGYSKRGLKEKVPKSAW 488
>AT4G25340.1 | chr4:12959657-12962632 REVERSE LENGTH=478
Length = 477
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 34/122 (27%)
Query: 90 GDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAGNVIPGIEAAVKSMRVGG 149
G V++ Y G+L K G FDS PF F +G G+VI G + V MRVG
Sbjct: 389 GKTVSVRYIGKLQ-KNGKIFDSNIGKS-------PFKFRLGIGSVIKGWDVGVNGMRVGD 440
Query: 150 LRRVIIPPSQGYQ-NTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELIS 208
R++ IPPS GY + IPPN + L FD+ELI+
Sbjct: 441 KRKLTIPPSMGYGVKGAGGQIPPNSW-------------------------LTFDVELIN 475
Query: 209 IR 210
++
Sbjct: 476 VQ 477
>AT1G18170.1 | chr1:6254291-6255507 FORWARD LENGTH=248
Length = 247
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 67 EIPGSGGVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFV 126
EI G++ D R G G P GD V I G++ G F T+ KD+ P
Sbjct: 118 EIVLPNGIRYYDQRVGGGATPRAGDLVVIDLKGQVQG-TGQVFVDTFGTKDKK-KMKPLA 175
Query: 127 FTVGAG----NVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQE-----PIPPN 172
VG+ + GI+ ++SM+ GG RRVI+PPS G+ E IPPN
Sbjct: 176 LVVGSKPYSKGLCEGIDYVLRSMKAGGKRRVIVPPSLGFGVDGAELESGLQIPPN 230
>AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224
Length = 223
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 73 GVKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAG 132
G++ D++ G G P G QVA +Y + + G FDS+ + +P++F VG+G
Sbjct: 107 GLQYKDIKVGRGPSPPVGFQVAANYVAMVPS--GQIFDSSLEKG------LPYLFRVGSG 158
Query: 133 NVIPGIEAAVKSMRVGGLRRVIIP 156
VI G++ + SM+ GG RR+ IP
Sbjct: 159 QVIKGLDEGILSMKAGGKRRLYIP 182
>AT3G25220.1 | chr3:9182691-9184463 FORWARD LENGTH=154
Length = 153
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 32/120 (26%)
Query: 90 GDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAGNVIPGIEAAVKSMRVGG 149
GD++ +HY G+L G FDS++ E GDP+ F +G G VIPG + + VG
Sbjct: 52 GDKIKVHYRGKLT--DGTVFDSSF----ERGDPIEF--ELGTGQVIPGWDQGLLGACVGE 103
Query: 150 LRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELISI 209
R++ IP GY + P P TLIFD EL+++
Sbjct: 104 KRKLKIPSKLGYGDNGSPPKIPGG------------------------ATLIFDTELVAV 139
>AT5G48580.1 | chr5:19696156-19697304 REVERSE LENGTH=164
Length = 163
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 32/123 (26%)
Query: 90 GDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAGNVIPGIEAAVKSMRVGG 149
GD + +HY G+L G FDS+++ D PF F +G+G VI G + + VG
Sbjct: 52 GDTIKVHYRGKLT--DGTVFDSSFERGD------PFEFKLGSGQVIKGWDQGLLGACVGE 103
Query: 150 LRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELISI 209
R++ IP GY P P TLIFD ELI++
Sbjct: 104 KRKLKIPAKLGYGEQGSPPTIPGG------------------------ATLIFDTELIAV 139
Query: 210 RQH 212
+
Sbjct: 140 NEK 142
>AT3G55520.1 | chr3:20594177-20595128 FORWARD LENGTH=191
Length = 190
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 36/148 (24%)
Query: 67 EIPGSGGVKALDLREGPGEVPADGDQ---VAIHYYGRLAAKQGWRFDSTYDHKDETGDPM 123
++ G GGV +R + + D V +HY G LA + FD+T + D +
Sbjct: 6 DLSGDGGVLKKIVRSAKPDAISPSDDLPVVDVHYEGILAEDEKV-FDTTRE------DNL 58
Query: 124 PFVFTVGAGNVIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEP-IPPNFFDRQRLFTT 182
F F +G G+VI + A+K+M+VG + ++ P Y P IPP+
Sbjct: 59 VFSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIPPD---------- 108
Query: 183 IFNPTRLANGEGSTLGTLIFDIELISIR 210
TLIF++EL++ R
Sbjct: 109 ---------------ATLIFEVELVACR 121
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,769,919
Number of extensions: 148015
Number of successful extensions: 311
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 302
Number of HSP's successfully gapped: 15
Length of query: 213
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 119
Effective length of database: 8,529,465
Effective search space: 1015006335
Effective search space used: 1015006335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)