BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0168600 Os02g0168600|AK067291
(224 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22260.2 | chr3:7871489-7873393 FORWARD LENGTH=246 298 2e-81
AT3G02070.1 | chr3:361368-363132 FORWARD LENGTH=220 270 3e-73
AT5G04250.1 | chr5:1176397-1178492 FORWARD LENGTH=346 219 6e-58
AT5G03330.1 | chr5:807728-809608 FORWARD LENGTH=357 209 9e-55
AT2G39320.1 | chr2:16417592-16418517 REVERSE LENGTH=190 86 1e-17
AT5G67170.1 | chr5:26799851-26801763 FORWARD LENGTH=376 69 2e-12
AT2G27350.5 | chr2:11699780-11702363 REVERSE LENGTH=507 60 8e-10
>AT3G22260.2 | chr3:7871489-7873393 FORWARD LENGTH=246
Length = 245
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 163/206 (79%), Gaps = 7/206 (3%)
Query: 26 DVTVGTLLTEAKNSGRS--LGKRLSHLDSIPHTPRVNGQIPDVNNATIDHETLLERLGTY 83
D T+ +L E ++ R LGKRLSHLDSIPHTPRVN +IPD+N+AT+DHE L RL TY
Sbjct: 40 DQTIARILAEDESLRREGKLGKRLSHLDSIPHTPRVNREIPDINDATLDHELLSGRLATY 99
Query: 84 GLAEFQIEGDGNCQFRALADQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVPMEYKVYLK 143
GLAE Q+EGDGNCQFRALADQ+FRN DYHKHVRK VVKQLK+ RK YE YVPM+Y+ Y +
Sbjct: 100 GLAELQMEGDGNCQFRALADQLFRNADYHKHVRKHVVKQLKQQRKLYEEYVPMKYRHYTR 159
Query: 144 KMKRSGEWGDHVTLQAAADRFAAKICLLTSFRDTCLIEIVPRGATPTKELWLSFWSEVHY 203
KMK+ GEWGDHVTLQAAADRF AKICL+TSFRD IEI+P P +E WLSFWSEVHY
Sbjct: 160 KMKKHGEWGDHVTLQAAADRFEAKICLVTSFRDQSYIEILPHNKNPLREAWLSFWSEVHY 219
Query: 204 NSLYAT-----EDLPNRKTRKKHWLF 224
NSLYA D+P RK R+KHWLF
Sbjct: 220 NSLYANGVLALPDVPTRKPRRKHWLF 245
>AT3G02070.1 | chr3:361368-363132 FORWARD LENGTH=220
Length = 219
Score = 270 bits (691), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 157/202 (77%), Gaps = 4/202 (1%)
Query: 26 DVTVGTLLTE--AKNSGRSLGKRLSHLDSIPHTPRVNGQIPDVNNATIDHETLLERLGTY 83
D + +L+E +K G ++G+RLS+L +PH PR+N IP++N+AT+DH+ LL+RL Y
Sbjct: 19 DRMIAFMLSEEYSKLDG-AVGRRLSNLAPVPHVPRINCYIPNLNDATLDHQRLLQRLNVY 77
Query: 84 GLAEFQIEGDGNCQFRALADQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVPMEYKVYLK 143
GL E ++ GDGNCQFRAL+DQ++R+P+YHK VR+ VVKQLKE R YE YVPM+YK Y K
Sbjct: 78 GLCELKVSGDGNCQFRALSDQLYRSPEYHKQVRREVVKQLKECRSMYESYVPMKYKRYYK 137
Query: 144 KMKRSGEWGDHVTLQAAADRFAAKICLLTSFRDTCLIEIVPRGATPTKELWLSFWSEVHY 203
KM + GEWGDH+TLQAAADRFAAKICLLTSFRDTC IEI+P+ P LWLSFWSEVHY
Sbjct: 138 KMGKFGEWGDHITLQAAADRFAAKICLLTSFRDTCFIEIIPQYQAPKGVLWLSFWSEVHY 197
Query: 204 NSLYATEDLP-NRKTRKKHWLF 224
NSLY + P K ++KHWLF
Sbjct: 198 NSLYDIQAAPVQHKPKRKHWLF 219
>AT5G04250.1 | chr5:1176397-1178492 FORWARD LENGTH=346
Length = 345
Score = 219 bits (559), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 134/184 (72%), Gaps = 2/184 (1%)
Query: 43 LGKRLSHLDSIPHTPRVNGQIPDVNNATIDHETLLERLGTYGLAEFQIEGDGNCQFRALA 102
+GKRL+ + I H P++NG++P + DHE L +RL YGL E +IEGDGNCQFR+L+
Sbjct: 162 VGKRLNQMIPIAHVPKINGELPSEDEQISDHERLFQRLQLYGLVENKIEGDGNCQFRSLS 221
Query: 103 DQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVPMEYKVYLKKMKRSGEWGDHVTLQAAAD 162
DQ++R+P++H VR+ VV QL R+ YEGYVPM Y YLK MKR+GEWGDHVTLQAAAD
Sbjct: 222 DQLYRSPEHHNFVREQVVNQLAYNREIYEGYVPMAYNDYLKAMKRNGEWGDHVTLQAAAD 281
Query: 163 RFAAKICLLTSFRDTCLIEIVPRGATPTKELWLSFWSEVHYNSLYATEDL--PNRKTRKK 220
F ++ ++TSF+DTC IEI+P + + LSFW+EVHYNS+Y +L P K +KK
Sbjct: 282 LFGVRMFVITSFKDTCYIEILPHFQKSNRLICLSFWAEVHYNSIYPEGELPIPEGKKKKK 341
Query: 221 HWLF 224
+W+F
Sbjct: 342 YWVF 345
>AT5G03330.1 | chr5:807728-809608 FORWARD LENGTH=357
Length = 356
Score = 209 bits (532), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 43 LGKRLSHLDSIPHTPRVNGQIPDVNNATIDHETLLERLGTYGLAEFQIEGDGNCQFRALA 102
G+RL+ + IP+ P++NG+IP A DHE L RL + E ++ GDGNCQFRALA
Sbjct: 171 FGRRLNQMVPIPYIPKINGEIPPEEEAVSDHERLRNRLEMFDFTEVKVPGDGNCQFRALA 230
Query: 103 DQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVPMEYKVYLKKMKRSGEWGDHVTLQAAAD 162
DQ+++ D HKHVR+ +VKQLK Y+GYVPM++ YL+KM RSGEWGDHVTLQAAAD
Sbjct: 231 DQLYKTADRHKHVRRQIVKQLKSRPDSYQGYVPMDFSDYLRKMSRSGEWGDHVTLQAAAD 290
Query: 163 RFAAKICLLTSFRDTCLIEIVPRGATPTKELWLSFWSEVHYNSLYATEDLPNRK-TRKKH 221
+ KI +LTSF+DTC IEI+P ++LSFW+EVHYN++Y D + RK+
Sbjct: 291 AYRVKIVVLTSFKDTCYIEILPTSQESKGVIFLSFWAEVHYNAIYLNRDTSETELQRKRK 350
Query: 222 W 222
W
Sbjct: 351 W 351
>AT2G39320.1 | chr2:16417592-16418517 REVERSE LENGTH=190
Length = 189
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 20/119 (16%)
Query: 90 IEGDGNCQFRALADQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVPMEYKVYLKKMKRSG 149
++ DGNCQFRALADQ+++N D H+ VR+ +VKQ + +
Sbjct: 2 MKSDGNCQFRALADQLYQNSDCHELVRQEIVKQNMS-------------------LSTNS 42
Query: 150 EWGDHVTLQAAADRFAAKICLLTSFRDTCLIEIVPRGAT-PTKELWLSFWSEVHYNSLY 207
+WGD VTL+ AAD + KI L+TS + +E +P+ P K + +S+ + +H+NS+Y
Sbjct: 43 QWGDEVTLRVAADVYQVKIILITSIKLIPFMEFLPKSQKEPDKVIHMSYLAGIHFNSIY 101
>AT5G67170.1 | chr5:26799851-26801763 FORWARD LENGTH=376
Length = 375
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 79 RLGTYGLAEFQIEGDGNCQFRALADQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVP--M 136
+L GL Q+ DGNC FRA+ADQ+ N D H R +V + + R+ +E ++ +
Sbjct: 31 QLDALGLKIIQVTADGNCFFRAIADQLEGNEDEHNKYRNMIVLYIVKNREMFEPFIEDDV 90
Query: 137 EYKVYLKKMKRSGEWGDHVTLQAAADRFAAKICL---------LTSFRDTCLIEIVPRGA 187
++ Y K M G W ++ LQAA+ + IC+ + +F D
Sbjct: 91 PFEDYCKTMDDDGTWAGNMELQAASLVTRSNICIHRNMSPRWYIRNFED----------- 139
Query: 188 TPTKELWLSFWSEVHYNSLYATED 211
T T+ + LS+ HYNS+ + ED
Sbjct: 140 TRTRMIHLSYHDGEHYNSVRSKED 163
>AT2G27350.5 | chr2:11699780-11702363 REVERSE LENGTH=507
Length = 506
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 93 DGNCQFRALADQIFRNPDYHKHVRKSVVKQLKEFRKHYEGYVPMEYKVYLKKMKRSGEWG 152
DGNC FRA+ADQ++ + + + R+ + +++ R H+ ++ + YLK+ +R +G
Sbjct: 224 DGNCLFRAVADQVYGDSEAYDLARQMCMDYMEQERDHFSQFITEGFTSYLKRKRRDKVYG 283
Query: 153 DHVTLQAAADRFAAKICLLTSFRDTCLIEIVPRGATPTKELWLSFWSEVHYNSL 206
++V +QA A+ + I + + + I +T T + LS+ HYNSL
Sbjct: 284 NNVEIQALAEMYNRPIHIYSYSTEPINI-FQGNYSTDTPPIRLSYHHGNHYNSL 336
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,706,790
Number of extensions: 190228
Number of successful extensions: 414
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 407
Number of HSP's successfully gapped: 7
Length of query: 224
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 129
Effective length of database: 8,502,049
Effective search space: 1096764321
Effective search space used: 1096764321
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)