BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0167700 Os02g0167700|AK069128
         (1218 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02560.1  | chr2:690345-697342 FORWARD LENGTH=1220            1767   0.0  

>AT2G02560.1 | chr2:690345-697342 FORWARD LENGTH=1220
          Length = 1219

 Score = 1767 bits (4576), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 869/1223 (71%), Positives = 1005/1223 (82%), Gaps = 9/1223 (0%)

Query: 1    MANMNITTILEK--MTGKDKDYRYMATSDLLSELNKEGFKADQDIEPKLTTTVLQQLEDA 58
            MAN+ ++ ILEK  MTGKDKDYRYMATSDLL+ELNK+ FK D D+E +L++ +LQQL+D 
Sbjct: 1    MANLQVSGILEKFQMTGKDKDYRYMATSDLLNELNKDSFKIDLDLEVRLSSIILQQLDDV 60

Query: 59   SGDVSGLAVKCLAPLVKKVGEDRVVEMTNILCDKLLNGKDQHRDTASIALKTIIVEVTTT 118
            +GDVSGLAVKCLAPLVKKVGE+R+VEMTN LCDKLL+GKDQHRDTASIAL+T++ ++  T
Sbjct: 61   AGDVSGLAVKCLAPLVKKVGEERIVEMTNKLCDKLLHGKDQHRDTASIALRTVVAQIAPT 120

Query: 119  SLAEKILVSLAPQLIKGATA-GKSAEVKCECLDILGDVLHRFGNLITKDHDSMXXXXXXX 177
             LA  ILV+L PQ+I G +  G S+ +KCECL+I+ DV+ ++G+L+T DH+ +       
Sbjct: 121  -LAPSILVTLTPQMIGGISGQGMSSGIKCECLEIMCDVVQKYGSLMTDDHEKLLNTLLLQ 179

Query: 178  XXXXXXXVRKKSISCIXXXXXXXXXXXXXKATFEVVQLLKNRSAKSEIARTNIQMIGALS 237
                   VRKK+++CI             KAT EVV+ L NR+AKSEI RTNIQMIGAL 
Sbjct: 180  LGCNQATVRKKTVTCIASLASSLSDDLLAKATVEVVKNLSNRNAKSEITRTNIQMIGALC 239

Query: 238  RSVGYRFGPHLAEAVPLLINYCTSASENDEELREYSLQALESFMLRCPRDISPYCEGILN 297
            R+VGYRFG HL   VP+LINYCTSASENDEELREYSLQALESF+LRCPRDISPYC+ ILN
Sbjct: 240  RAVGYRFGTHLGNTVPVLINYCTSASENDEELREYSLQALESFLLRCPRDISPYCDEILN 299

Query: 298  LALEYISYDPNFTDSMXXXXXXXXXXXXXXXXSANEYTDDEDASWKVRRASAKCLSAIIV 357
            L LEYISYDPNFTD+M                SANEYTDDEDASWKVRRA+AKCL+ +IV
Sbjct: 300  LTLEYISYDPNFTDNMEEDTDNETLEDEEDDESANEYTDDEDASWKVRRAAAKCLAGLIV 359

Query: 358  SRPEMLSKMYLEACPKLIERFREREENVKMDIFNTFIELLRQTGNMTKGQGDIDESSPRW 417
            SR EML+K+Y EACPKLI+RF+EREENVKMD+FNTFI+LLRQTGN+TKGQ D DESSP+W
Sbjct: 360  SRSEMLTKVYQEACPKLIDRFKEREENVKMDVFNTFIDLLRQTGNVTKGQTDTDESSPKW 419

Query: 418  LLKQEVPKVVKSINRQLREKSIKTKVGAFSVLKELVVVLPDCLADHIGSLVPGIEKALND 477
            LLKQEV K+VKSINRQLREKS+KTKVGAFSVL+ELVVVLPDCLADHIGSLVPGIE+ALND
Sbjct: 420  LLKQEVSKIVKSINRQLREKSVKTKVGAFSVLRELVVVLPDCLADHIGSLVPGIERALND 479

Query: 478  KSSTSNLKIEALVFTRLVMASHSPAVFHPYIQALSGPILSAIGDRYYKVTAEALRVCGEL 537
            KSSTSNLKIEALVFT+LV+ASH+P VFHPYI+ALS P+L+A+G+RYYKVTAEALRVCGEL
Sbjct: 480  KSSTSNLKIEALVFTKLVLASHAPPVFHPYIKALSSPVLAAVGERYYKVTAEALRVCGEL 539

Query: 538  VRVLRPNFEARTLDYRPYIGPIYKAILARLANQDQDQEVKECAISCMSLVVFTFGDGLQR 597
            VRV+RP+      D++P++ PIY AI++RL NQDQDQEVKECAI+CM LV+ TFGD L+ 
Sbjct: 540  VRVVRPSTAGMGFDFKPFVHPIYNAIMSRLTNQDQDQEVKECAITCMGLVISTFGDQLRA 599

Query: 598  ELPACLPILVDRMGNEITRLTAVKAFAVIAKSPLRIDLSCVLDHVISELTAFLRKANRAL 657
            ELP+CLP+LVDRMGNEITRLTAVKAF+VIA SPL I+LSCVLDH+I+ELT FLRKANR L
Sbjct: 600  ELPSCLPVLVDRMGNEITRLTAVKAFSVIATSPLHINLSCVLDHLIAELTGFLRKANRVL 659

Query: 658  RQATLGTLNSLVVAYGGQIGS-SYETIIAELSTLISDMDLHMTALALELCCTIMVDRKSI 716
            RQATL T+N+LV AYG +IGS +YE I+ ELS+LIS  DLHMTALALELCCT+M  +   
Sbjct: 660  RQATLITMNTLVTAYGDKIGSEAYEVILVELSSLISVSDLHMTALALELCCTLMTGKSCS 719

Query: 717  QNVGLAVRYKVLPQALILIXXXXXXXXXXXXXXXXXXXXVQSANTSFDTLLDSLISTAKP 776
            +N+ LAVR KVLPQAL L+                    V  ANTSF TLL+SL+S AKP
Sbjct: 720  ENISLAVRNKVLPQALTLVKSPLLQGQALLDLQKFFEALVYHANTSFYTLLESLLSCAKP 779

Query: 777  S-QSGGLAKQALSSIAQCVAVLCLAAGDQKCASTIEMLKGILKDDSTTNSAKQHMALLCL 835
            S QSGG+ KQAL SIAQCVAVLCLAAGD+ C+ST++ML  ILKDDS TNSAKQH+ALL L
Sbjct: 780  SPQSGGVPKQALYSIAQCVAVLCLAAGDKNCSSTVKMLMEILKDDSGTNSAKQHLALLSL 839

Query: 836  GEIGRRKDLSNHAQIENIVIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILNQIDNQ 895
            GEIGRRKDLS HA IE IVIESFQSPFEEIKSAASYALGNIAVGNLS YLPFIL+QIDNQ
Sbjct: 840  GEIGRRKDLSAHAGIETIVIESFQSPFEEIKSAASYALGNIAVGNLSNYLPFILDQIDNQ 899

Query: 896  QKKQYLLLHSLKEVIARQSVDHTGQSELQDSNIEKILALLFNHCESEEEGVRNVVAECLG 955
            QKKQY+LLHSLKEVI RQSVD   +++ Q+S++EKILALLFNHCESEEEGVRNVVAECLG
Sbjct: 900  QKKQYILLHSLKEVIVRQSVD---KADFQNSSVEKILALLFNHCESEEEGVRNVVAECLG 956

Query: 956  KIALIEPRKLIPALKERTSSPAANTRATVAIAIKYSIVERPGKIDEIMYSEISTFLMLIK 1015
            K+ALIEP KL+PAL+ RT+SPAA TRATV  A+KYS+VERP K+DEI++ +IS+FLMLIK
Sbjct: 957  KMALIEPEKLVPALQVRTTSPAAFTRATVVTAVKYSVVERPEKLDEIIFPQISSFLMLIK 1016

Query: 1016 DSDRHVRRAAVLALSTAAHNKPNLIKGXXXXXXXXXYDQTVVKQELIRTVDLGPFKHVVD 1075
            D DRHVRRAAV ALST AH KPNLIKG         YDQTV+K+ELIRTVDLGPFKHVVD
Sbjct: 1017 DGDRHVRRAAVSALSTFAHYKPNLIKGLLPELLPLLYDQTVIKKELIRTVDLGPFKHVVD 1076

Query: 1076 DGLELRKAAFECVDTLLDSCLDQVNPSSFIVPFLLSGLGDHYDVKMPCHLILSKLADKCP 1135
            DGLELRKAAFECV TL+DSCLDQVNPSSFIVPFL SGL DHYD+KM CHLILS LADKCP
Sbjct: 1077 DGLELRKAAFECVFTLVDSCLDQVNPSSFIVPFLKSGLEDHYDLKMLCHLILSLLADKCP 1136

Query: 1136 SAVLAVLDSLVDPIEKTINHKPKGDAVKQEVDRNEDMXXXXXXXXXXXXXXXGNDYSMRF 1195
            SAVLAVLDSLV+P+ KTI+ KPK DAVKQE DRNEDM               G DYS +F
Sbjct: 1137 SAVLAVLDSLVEPLHKTISFKPKQDAVKQEHDRNEDMIRSALRAISSLDRINGVDYSHKF 1196

Query: 1196 KNLMNKIMASPPLADKYNSVRSE 1218
            K LM  +  S PL +K+ ++R+E
Sbjct: 1197 KGLMGDMKRSVPLWEKFQTIRNE 1219



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,033,959
Number of extensions: 833753
Number of successful extensions: 2339
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2333
Number of HSP's successfully gapped: 2
Length of query: 1218
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1108
Effective length of database: 8,090,809
Effective search space: 8964616372
Effective search space used: 8964616372
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)