BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0165000 Os02g0165000|AK069562
(487 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60580.2 | chr5:24354298-24356706 FORWARD LENGTH=495 307 1e-83
AT3G09760.1 | chr3:2992975-2995451 REVERSE LENGTH=492 275 4e-74
AT5G03180.2 | chr5:754201-756411 REVERSE LENGTH=467 249 2e-66
AT3G06330.1 | chr3:1917334-1919709 FORWARD LENGTH=427 207 1e-53
AT5G18760.1 | chr5:6258508-6260828 REVERSE LENGTH=412 185 5e-47
AT2G37950.1 | chr2:15882536-15883665 REVERSE LENGTH=208 70 4e-12
AT5G01070.2 | chr5:25094-25799 REVERSE LENGTH=207 66 5e-11
AT5G05830.1 | chr5:1755910-1756825 FORWARD LENGTH=205 64 3e-10
AT5G59000.1 | chr5:23818768-23820018 FORWARD LENGTH=232 59 4e-09
AT5G63780.1 | chr5:25525160-25526446 FORWARD LENGTH=368 53 5e-07
AT5G08750.3 | chr5:2852912-2854343 FORWARD LENGTH=371 52 8e-07
AT2G34200.1 | chr2:14441105-14441882 FORWARD LENGTH=223 52 1e-06
AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260 52 1e-06
AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289 51 2e-06
AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308 50 2e-06
AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266 49 7e-06
>AT5G60580.2 | chr5:24354298-24356706 FORWARD LENGTH=495
Length = 494
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/449 (42%), Positives = 253/449 (56%), Gaps = 47/449 (10%)
Query: 15 ESSNRAGEDAKSDGVSCQNSRRPNLSLQIPNRAFDDTLPTSTRIKI-------------- 60
E S+ ED ++ Q RR NLSLQIP+RA + S IK+
Sbjct: 26 EGSSAITEDTSAN---VQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNFA 82
Query: 61 ----SPSPNSARSGLPPRPNSTRTKSSIRGIIPQRSFKAKSSLQDGDQTILLIPDTPSSS 116
SP P S + PR KSS++ ++P+ K K+S D ++ P+S
Sbjct: 83 LTSSSPGPTPTSSSVLPR-----GKSSLKNLLPKAGCKPKTSNTDIEKGQGNACSPPAS- 136
Query: 117 GQQVKATTSRSFSFTKVINSLSAKRTHSLPVTPVAASGPSSHEGHADNLPSTVKNEVETQ 176
Q KA+ SRS S +K+ KRT SLPVTPV S S G P T +
Sbjct: 137 --QEKASISRSLSLSKLFTP-RIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNRKGSVH 193
Query: 177 IRRSLSAPGNHDSKDLRRTASSGLXXXXXXXXXXXXXXXXASNDGIEEAVXXXXXXXXXX 236
I RS S P N L+ S AS G E
Sbjct: 194 IARSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTET---GDADGEDI 250
Query: 237 XXXXXVCRICLVELNEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQN 296
VCRICLVEL EGGETLK+ECSCKGELALAH++CA+KWF+IKGNKTC+VC+QEV+N
Sbjct: 251 PEDEAVCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKN 310
Query: 297 LPVTLLRIQ-IRTVNRQPRNGVQQRAAHPHRFWKETPVLVMVSTLAYFCFLEQLLVADMK 355
LPVTLLRIQ +R +GV Q +R W+E PVLV++S LAYFCFLEQLLV +M
Sbjct: 311 LPVTLLRIQSLR------NSGVPQLDVSGYRVWQEVPVLVIISMLAYFCFLEQLLVENMG 364
Query: 356 SRALAISLPFSCLLGIFSSILASTMATD-------NYLWAFATFQFAFLILFAHIFYNLL 408
+ A+AISLPFSC+LG+ +S+ ASTM + ++W +A+ QFA ++LFAHIFY+++
Sbjct: 365 TGAIAISLPFSCILGLLASMTASTMVLEYSYAVMRRFVWIYASVQFALVVLFAHIFYSVV 424
Query: 409 KMGAVLAILLASFTGFGIAISLNAMLIEY 437
K+ VL++LL++F GFG+ I +++++E+
Sbjct: 425 KLQPVLSVLLSTFAGFGVCICGSSVMVEF 453
>AT3G09760.1 | chr3:2992975-2995451 REVERSE LENGTH=492
Length = 491
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 212/362 (58%), Gaps = 26/362 (7%)
Query: 82 SSIRGIIPQRSFKAKSSLQDG----DQTILLIPDTPSSSGQQVKATTSRSFSFTKVINSL 137
+S++ +IP+ SFK ++S D L +PSS + ++T ++ T ++
Sbjct: 115 NSLKNLIPKLSFKNRNSNNDNVDIEKAADLGFVSSPSSGNGRDRST----WTLTNILTP- 169
Query: 138 SAKRTHSLPVTPVAASGPSSHEGH-ADNLPSTVKNEVETQIRRSLSAPG-NHDSKDLRRT 195
K+T SLPVTP+A S P S G A +L ++ K I RS S P N D +
Sbjct: 170 RLKKTESLPVTPIAHSNPESTHGRFAVDLVTSTKKGPPLPIHRSRSVPAFNKDGSQRQLG 229
Query: 196 ASSGLXXXXXXXXXXXXXXXXASNDGIEEAVXXXXXXXXXXXXXXXVCRICLVELNEGGE 255
+ A+ DG E+ VCRICLVEL E E
Sbjct: 230 VFRVIPTPNMSPTRNTIKLNDANVDGAEDV-----------PEEEAVCRICLVELGEDSE 278
Query: 256 TLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLPVTLLRIQIRTVNRQPRN 315
K+EC C+GELALAH+EC IKWF+IKGN+TCDVC+QEVQNLPVTLLR+Q N +
Sbjct: 279 AFKMECLCRGELALAHKECTIKWFTIKGNRTCDVCKQEVQNLPVTLLRMQ----NSRGSI 334
Query: 316 GVQQRAAHPHRFWKETPVLVMVSTLAYFCFLEQLLVADMKSRALAISLPFSCLLGIFSSI 375
G A + W++ P+LV+VS LAYFCFLEQLL+ M+S A+A+SLPFSC+LG+F+S+
Sbjct: 335 GAPDAEAAHYSLWQDVPILVIVSMLAYFCFLEQLLLTKMQSGAIAVSLPFSCVLGLFASM 394
Query: 376 LASTMATDNYLWAFATFQFAFLILFAHIFYNLLKMGAVLAILLASFTGFGIAISLNAMLI 435
A+TM Y+W +AT QF ++ F+HIF+ L++M V+AILLA+ GFG+ +S ++
Sbjct: 395 TATTMVPKRYVWIYATTQFGLVVFFSHIFFTLVRMQPVVAILLATIVGFGLTMSGTTGIV 454
Query: 436 EY 437
E+
Sbjct: 455 EF 456
>AT5G03180.2 | chr5:754201-756411 REVERSE LENGTH=467
Length = 466
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 221/402 (54%), Gaps = 44/402 (10%)
Query: 53 PTSTRIKISP--SPNSARSGLPPRPNSTRTKSSIRGIIPQRSFKAKSSLQDGDQTILLIP 110
P S R K SP SP + R P+S+R +++ Q++FK ++ D ++ ++
Sbjct: 72 PVSKRFKFSPMSSPRTGRRVGSMSPSSSRNRTN------QKNFKNRNHSADIEEGVV--- 122
Query: 111 DTPSSSGQQVKATTSRSFSFTKVINSLSAKRTHSLPVTPVAASGPSSHEGH--ADNLPST 168
+P G K+ R++S T ++ +K+T S + S P S G + P T
Sbjct: 123 -SPLGDGSD-KSYIPRTWSLTNLLAPRKSKKTESF----ITHSNPESMNGRYAVEVDPVT 176
Query: 169 -VKNEVETQIRRSLSAP------GNHDSKDLRR---TASSGLXXXXXXXXXXXXXXXXAS 218
+K E IRR+ S P G+ + R T S G
Sbjct: 177 SMKGERLLPIRRTRSVPTFFNKDGSVKPSSVFRVIPTPSRGDEKRLEMTQASKLSKLHDE 236
Query: 219 NDGIEEAVXXXXXXXXXXXXXXXVCRICLVELNEGGETLKLECSCKGELALAHQECAIKW 278
ND E V VCRIC+VE+ E E K+EC CKGELALAH+ C IKW
Sbjct: 237 NDDGGEDVPEEEA----------VCRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKW 286
Query: 279 FSIKGNKTCDVCRQEVQNLPVTLLRIQIRTVNRQPRNGVQQRAAHPHRFWKETPVLVMVS 338
F+IKGN TCDVC+QEV+NLPVTLLR+Q + NR R + + W++ P+LV+VS
Sbjct: 287 FTIKGNITCDVCKQEVRNLPVTLLRVQ-DSQNRS-RAARDIEISRFNNVWQDIPILVIVS 344
Query: 339 TLAYFCFLEQLLVADMKSRALAISLPFSCLLGIFSSILASTMATDNYLWAFATFQFAFLI 398
LAYFCFLEQLL+ DMKS A+AI+LPFSC++G+ +S++++TM NY+W +AT QF F++
Sbjct: 345 MLAYFCFLEQLLIIDMKSSAVAIALPFSCIIGLLASMISTTMVKKNYVWIYATVQFGFVV 404
Query: 399 LFAHIFYNLLKMGA---VLAILLASFTGFGIAISLNAMLIEY 437
LFA +FY +++ V+ I+LA+ GFG+ ++ + EY
Sbjct: 405 LFAQLFYRVVRFDVKQPVMCIVLATMIGFGLTMTGTTAINEY 446
>AT3G06330.1 | chr3:1917334-1919709 FORWARD LENGTH=427
Length = 426
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 207/420 (49%), Gaps = 44/420 (10%)
Query: 22 EDAKSDGVSCQNSRRPNLSLQIPNRA--FDDTLPTSTRIKISPSPNSARSGLPPRPNSTR 79
E + D SC + +LS+QIP+R+ F + +K +PS S
Sbjct: 33 EKSTEDVPSCSHL---DLSIQIPSRSLPFGNGRNPKGSLKSTPSFKSG------------ 77
Query: 80 TKSSIRGIIPQRSFKAKSSLQ-DGDQTILLIPDTPSSSGQQVKATTSRSFSFTKVINSLS 138
T SS RGI+ S K K Q + +++ LL P + ++ AT S + + K
Sbjct: 78 TTSSPRGILRNLSLKKKVISQPESERSSLLSPGL-METAKKPNATGSTTSPYWK------ 130
Query: 139 AKRTHSLPVTPVAASGPSSHEGHADNLPSTVKNEVETQIRRSLSAPGNHDSKDLRRTASS 198
R SLP A P + +P N+ RSLS PG + K + R+ S
Sbjct: 131 --RCLSLPSRQAAKLSPVVSTQLSAGVPGDPPNK---DYSRSLSMPGRN--KVIVRSIS- 182
Query: 199 GLXXXXXXXXXXXXXXXXASNDGIEEAVXXXXXXXXXXXXXXXVCRICLVELNEGGETLK 258
S D + VCRICL ++ E G TLK
Sbjct: 183 -------FDNHKARVSSETSADQVSSV--PPEETDEEIPEEEAVCRICL-DVCEEGNTLK 232
Query: 259 LECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLPVTLLRIQIRTVNRQPRNGVQ 318
+ECSCKG+L L H+ CA+KWFS KG +TCDVCRQ VQNLPVTL+R+ R Q
Sbjct: 233 MECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQ 292
Query: 319 QRA-AHPHRFWKETPVLVMVSTLAYFCFLEQLLVADMKSRALAISLPFSCLLGIFSSILA 377
Q + W+E VLV++ST+ YF FLEQLL+ D+ +A+ I+ PFS LG+ +SI A
Sbjct: 293 QNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAIYIAAPFSLTLGLLASIFA 352
Query: 378 STMATDNYLWAFATFQFAFLILFAHIFYNLLKMGAVLAILLASFTGFGIAISLNAMLIEY 437
+A Y+W +A +FA + + HIFY +++ A +IL A GFGIA+ LN++ + Y
Sbjct: 353 IVLAIREYIWTYAALEFALVGMLVHIFYATVRLSATYSILFAGILGFGIAVCLNSLYLHY 412
>AT5G18760.1 | chr5:6258508-6260828 REVERSE LENGTH=412
Length = 411
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 196/370 (52%), Gaps = 31/370 (8%)
Query: 71 LPPRPNSTRTKSSIRGIIPQRSFKAKSSLQDGDQTILLIPDTPSSSGQQVKATTSRSFSF 130
+PP+P + GI+ S K K+SL + ++ +LL P +S + + A+ S +
Sbjct: 56 IPPKPTPSL------GILRNLSLKRKASLPNYERRLLLSPSVSETSEKPLVASPITSPYW 109
Query: 131 TKVINSLSAKRTHSLPVTPVAASGPSSHEGHADNLPSTVKNEVETQIRRSLSAPGNHDSK 190
+ LS ++S ++ V ++ P S H++ P + K+ + + RSLS ++
Sbjct: 110 KR---CLSLPSSNSAKLSLVVSTTPVSAVVHSEQ-PKSNKDGLHASVSRSLSM-----NR 160
Query: 191 DLRRTASSGLXXXXXXXXXXXXXXXXASNDGIEEAVXXXXXXXXXXXXXXXVCRICLVEL 250
+ R S A+ D I VCRICL ++
Sbjct: 161 VIVRAVSFD--------DNKNHISNEANGDQITPV--PAEETEEEIPEEEAVCRICL-DV 209
Query: 251 NEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLPVTLLRIQIRTVN 310
E G TLK+ECSCKG+L L H+ CAIKWFS KG + CDVCRQEV+NLPV LLR+ T+N
Sbjct: 210 CEEGNTLKMECSCKGDLRLVHEHCAIKWFSTKGTRICDVCRQEVRNLPVILLRVP--TIN 267
Query: 311 RQP-RNGVQQRAAHPHRF--WKETPVLVMVSTLAYFCFLEQLLVADMKSRALAISLPFSC 367
+ R + Q+++ P +E VLV++ST+ YF FLE LL+ D+ S+A+ ++ PFS
Sbjct: 268 QLTNRRELTQQSSEPQSISVGQEFVVLVLISTVCYFFFLEHLLIRDLNSQAIFVAAPFSF 327
Query: 368 LLGIFSSILASTMATDNYLWAFATFQFAFLILFAHIFYNLLKMGAVLAILLASFTGFGIA 427
L + +S A +A Y+W +A +FA + L H+ Y L++ + A+L A GFG+A
Sbjct: 328 TLALLASTFAVILAIREYIWTYAALEFALVALLVHLLYATLRVPVIYAMLFAGILGFGMA 387
Query: 428 ISLNAMLIEY 437
+ LN + I Y
Sbjct: 388 MCLNLLCICY 397
>AT2G37950.1 | chr2:15882536-15883665 REVERSE LENGTH=208
Length = 207
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 243 CRICLVELN-EGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLPVTL 301
CRIC + + GG ++L CSCK +LA+AH++CA WF IKG+KTC++C+ +N+
Sbjct: 84 CRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGAN 143
Query: 302 LRIQIRTVNRQPRNGVQQRAAHP------HRFWKETPVLVMVSTLAYFCFL 346
+ R+ RNG + A W+ V+ +V F F
Sbjct: 144 EMVGSTMEERELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMVFGFF 194
>AT5G01070.2 | chr5:25094-25799 REVERSE LENGTH=207
Length = 206
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 243 CRICLVEL----NEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNL 297
CRIC + L +E G+ + L CSCK +L H++CA WF IKGNKTC++CR QN
Sbjct: 78 CRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNF 136
>AT5G05830.1 | chr5:1755910-1756825 FORWARD LENGTH=205
Length = 204
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 243 CRICLVELN----EGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLP 298
CRIC + L+ E G ++L CSCK +LA AH+ CA WF IKGNK C+VC N+
Sbjct: 79 CRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNV- 137
Query: 299 VTLLRIQIRTVNRQPRNGVQQ--------RAAHPHRFWKETPVLVMVSTLAYFCFL 346
V + ++ +R NGV+ R FW+ L + F F+
Sbjct: 138 VGSVEVESEE-SRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFV 192
>AT5G59000.1 | chr5:23818768-23820018 FORWARD LENGTH=232
Length = 231
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 254 GETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLPVTLLRIQ-IRTVNRQ 312
G L+L CSCKG+L +AH +CA WF IKGN TC++C N+ + + + Q
Sbjct: 127 GLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTHSQ 186
Query: 313 PRNGVQQRAAHPHRFWKETPVLVMVSTLAYFCFLEQLL 350
G P W PV+ + F F+ L
Sbjct: 187 AAAGQSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWL 224
>AT5G63780.1 | chr5:25525160-25526446 FORWARD LENGTH=368
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 257 LKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNL 297
L+L CSCK ELAL H CA+KWF G+ C++C +N+
Sbjct: 135 LELGCSCKNELALVHYACALKWFLNHGSTVCEICGHPAENI 175
>AT5G08750.3 | chr5:2852912-2854343 FORWARD LENGTH=371
Length = 370
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 257 LKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNL 297
L+L CSCK +LAL H CA+KWF G+ C++C + +N+
Sbjct: 130 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENI 170
>AT2G34200.1 | chr2:14441105-14441882 FORWARD LENGTH=223
Length = 222
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 255 ETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLPVTLLR 303
E +++ C CK EL LAH CA WF ++GN C++C +N+ V L+
Sbjct: 125 ELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCEICGCTAKNVTVRLME 173
>AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260
Length = 259
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 243 CRICLVE-LNEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQ---NLP 298
CRIC E L+ ET CSC G + AH+ C +W + KG+ TC++C QE + P
Sbjct: 59 CRICHDEDLDSNMET---PCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAP 115
Query: 299 VTLLRIQIRTVNRQPRNGVQQRAAHPHRFWKETP 332
LL + ++ + G+ QR HRF P
Sbjct: 116 PPLLELGHVPLHFRGNWGISQRE---HRFITVVP 146
>AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 243 CRICLVELNEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQN 296
CRIC E + + L+ C+C G L AH++C +W + KG+ TC++C Q Q+
Sbjct: 69 CRICQEE--DSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQH 120
>AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 243 CRICLVELNEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQ 295
CRIC E + + L+ CSC G L AH++C +W + KG+ TC++C + Q
Sbjct: 78 CRICQEE--DSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQ 128
>AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266
Length = 265
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 243 CRICLVELNEGGETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQ 295
CRIC E + + L+ C+C G L AH++C +W + KGN C++C Q Q
Sbjct: 57 CRICQDECD--IKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQ 107
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,602,948
Number of extensions: 331134
Number of successful extensions: 1282
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 1273
Number of HSP's successfully gapped: 20
Length of query: 487
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 385
Effective length of database: 8,310,137
Effective search space: 3199402745
Effective search space used: 3199402745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)