BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0150900 Os02g0150900|AK121424
(320 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31410.1 | chr4:15244259-15245474 FORWARD LENGTH=309 240 8e-64
AT3G24740.1 | chr3:9032397-9033461 FORWARD LENGTH=355 162 2e-40
AT1G77770.1 | chr1:29246380-29247275 REVERSE LENGTH=266 155 2e-38
AT1G68140.1 | chr1:25539410-25540414 REVERSE LENGTH=335 154 7e-38
AT4G08460.1 | chr4:5377378-5378202 REVERSE LENGTH=275 153 1e-37
AT1G15430.1 | chr1:5305011-5305790 FORWARD LENGTH=260 103 2e-22
AT1G80220.1 | chr1:30167839-30168606 FORWARD LENGTH=256 100 1e-21
AT3G25910.1 | chr3:9489836-9490954 FORWARD LENGTH=373 85 5e-17
AT2G26050.1 | chr2:11098652-11099380 REVERSE LENGTH=222 70 1e-12
>AT4G31410.1 | chr4:15244259-15245474 FORWARD LENGTH=309
Length = 308
Score = 240 bits (612), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 148/215 (68%), Gaps = 9/215 (4%)
Query: 21 KLDKSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGAHGLPT 80
+L +W +D+TCPICLDFPHN VLL+C+SY GCR F+C+TD SNCL+RF A G +
Sbjct: 24 QLTLNW-DDLTCPICLDFPHNGVLLQCSSYGNGCRAFVCNTDHLHSNCLDRFISACGTES 82
Query: 81 NMKVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDEARLHLNQKKRCCEESCC 140
P P + S +P CPLCRG+V GW+V++EARL L++KKRCCEE C
Sbjct: 83 ----PPAPDEPRSKVLEESC----KPVCPLCRGEVTGWLVVEEARLRLDEKKRCCEEERC 134
Query: 141 SYVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVLSTIHAQVPNGIVLG 200
++G + EL+KH Q +HP+SRPSEIDPAR++DWENFQQSS+IIDVLSTIH++VP G+VLG
Sbjct: 135 RFMGTYLELRKHAQSEHPDSRPSEIDPARKLDWENFQQSSEIIDVLSTIHSEVPRGVVLG 194
Query: 201 DYVIXXXXXXXXXXXXVYHRVRGNWWTSCIFCKSF 235
DYVI GNWWTSCI + F
Sbjct: 195 DYVIEYGDDDTGDEFEDVPNNEGNWWTSCILYQMF 229
>AT3G24740.1 | chr3:9032397-9033461 FORWARD LENGTH=355
Length = 354
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 38/216 (17%)
Query: 27 MEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGAHGLPTNMKVPS 86
+++++CP+C+D PHNAVLL C+S++KGCR +ICDT SNCL+RFK H N P
Sbjct: 21 LDEVSCPVCMDHPHNAVLLLCSSHDKGCRSYICDTSYRHSNCLDRFKKLHSESANDPTPE 80
Query: 87 FNGAPLD---------------SIHIISSNTTD-----------------------RPAC 108
N A + S H S N C
Sbjct: 81 ANLASREHNNESLYEHGTASRSSFHRESGNRGSSWDSESLRRRRRVEEEVESEDITNLKC 140
Query: 109 PLCRGDVIGWVVIDEARLHLNQKKRCCEESCCSYVGNFHELQKHTQQKHPNSRPSEIDPA 168
PLCRG V+GW V++E R +L+ K R C CS+ GN+ +L++H ++ HP +RPS+ DP+
Sbjct: 141 PLCRGTVLGWKVVEEVRTYLDHKNRSCSRESCSFTGNYQDLRRHARRTHPTTRPSDTDPS 200
Query: 169 RRVDWENFQQSSDIIDVLSTIHAQVPNGIVLGDYVI 204
R W + + D++S I + +P +V+GDYVI
Sbjct: 201 RERAWRRLENQREYGDIVSAIRSAMPGAVVVGDYVI 236
>AT1G77770.1 | chr1:29246380-29247275 REVERSE LENGTH=266
Length = 265
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 109/182 (59%), Gaps = 21/182 (11%)
Query: 23 DKSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGAHGLPTNM 82
K W TCP+CL+ PHNAVLL C+SY KGCRP++C T +NCL++++ ++G N
Sbjct: 23 KKEWAGS-TCPVCLESPHNAVLLLCSSYHKGCRPYMCATSSRFANCLDQYRKSYG-NENS 80
Query: 83 KVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDEARLHLNQKKRCCEESCCSY 142
P CPLCRG V GW V+ +AR+H N K+R C + CS+
Sbjct: 81 GQPEL-------------------LCPLCRGQVKGWTVVKDARMHFNSKRRTCMQDNCSF 121
Query: 143 VGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVLSTIHAQVPNGIVLGDY 202
+GNF +L+KH ++KHP++ P IDPA W+ ++ D DV+STI + P +VLGDY
Sbjct: 122 LGNFRKLKKHMKEKHPHACPRAIDPALETKWKRLERERDRRDVISTIMSSTPGAVVLGDY 181
Query: 203 VI 204
VI
Sbjct: 182 VI 183
>AT1G68140.1 | chr1:25539410-25540414 REVERSE LENGTH=335
Length = 334
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 22 LDKSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGAHGLPTN 81
L+K E++ C +C++ PHNAVLL C+S++KGCRP++C T SNCL+++K A
Sbjct: 45 LEKRDWENVICSVCMECPHNAVLLLCSSHDKGCRPYMCGTSFRYSNCLDQYKKASAKLKT 104
Query: 82 MKVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDEARLHLNQKKRCCEESCCS 141
N + L ++ CPLCRG V GW ++ AR LN KKR C + C
Sbjct: 105 SGHQQINKSELGNL-----------TCPLCRGQVKGWTIVQPARDFLNLKKRICMQENCV 153
Query: 142 YVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVLSTIHAQVPNGIVLGD 201
Y G F EL+KH + HP+++P E+DP +W + D DV+STI + +P +V GD
Sbjct: 154 YAGTFKELRKHMKVDHPSAKPREVDPDVEQNWRRLEIEHDRDDVMSTIRSTMPGTVVYGD 213
Query: 202 YVI 204
YVI
Sbjct: 214 YVI 216
>AT4G08460.1 | chr4:5377378-5378202 REVERSE LENGTH=275
Length = 274
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 104/184 (56%), Gaps = 25/184 (13%)
Query: 24 KSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGAHGLPTNMK 83
K W +TCP+CL+ PHN+V+L C+SY KGCRP++C T SNCLE++K A+
Sbjct: 42 KPWT-GVTCPVCLEVPHNSVVLLCSSYHKGCRPYMCATGNRFSNCLEQYKKAYA------ 94
Query: 84 VPSFNGAPLDSIHIISSNTTDRPA---CPLCRGDVIGWVVIDEARLHLNQKKRCCEESCC 140
+D+P CPLCRG V GW V+++ R +LN KKR C C
Sbjct: 95 ---------------KDEKSDKPPELLCPLCRGQVKGWTVVEKERKYLNSKKRSCMNDEC 139
Query: 141 SYVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVLSTIHAQVPNGIVLG 200
+ G++ +L+KH ++ HP ++P IDP W+ + + DV+ST+ + P +V G
Sbjct: 140 LFYGSYRQLKKHVKENHPRAKPRAIDPVLEAKWKKLEVERERSDVISTVMSSTPGAMVFG 199
Query: 201 DYVI 204
DYVI
Sbjct: 200 DYVI 203
>AT1G15430.1 | chr1:5305011-5305790 FORWARD LENGTH=260
Length = 259
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 21/176 (11%)
Query: 13 AGSFDLDAKLDKSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERF 72
A S ++ + W ED+ C IC++ PHNAVLL+C+S+ KGCR ++CDT SNC +++
Sbjct: 35 ASSSPVELESVSEW-EDVRCVICMEPPHNAVLLQCSSFSKGCRAYMCDTSARHSNCFKQY 93
Query: 73 KGAHGLPTNMKVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDEARLHLNQKK 132
+ ++ ++H CP CRG+V G + AR +N +
Sbjct: 94 RRSNSSSRCSG---------KTLH-----------CPYCRGEVQGTMKSTCARRFMNARP 133
Query: 133 RCCEESCCSYVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVLST 188
RCC C + G + +L+ H + +HP P ++DP + WE ++ ++ I++L+
Sbjct: 134 RCCTVDKCDFSGTYAQLKNHLKTEHPGFTPPKLDPWEQHMWEQLEREAEYIEMLNA 189
>AT1G80220.1 | chr1:30167839-30168606 FORWARD LENGTH=256
Length = 255
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 32/190 (16%)
Query: 18 LDAKLDKSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERF-KGAH 76
+++ +D+S ED+ C IC++ PH AVLL C+S GCRP++C T SNC ++F +
Sbjct: 33 IESPIDESNWEDVRCMICMEPPHEAVLLTCSSSLNGCRPYMCGTSFRHSNCFKQFCRNNR 92
Query: 77 GLPTNMKVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDE-ARLHLNQKKRCC 135
+N K ++H CPLCRG+V+ + AR +N K R C
Sbjct: 93 KKRSNTK----------TLH-----------CPLCRGEVLETKKASKTARRFMNAKPRSC 131
Query: 136 EESCCSYVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVLST------- 188
C + G + L KH + +H P+++DP R+ WE + ++ ++++S
Sbjct: 132 PVDGCEFSGTYAHLNKHLKTEHQGLVPAKVDPQRQSRWEMLVRHAEYVNLMSAAGIPHMS 191
Query: 189 --IHAQVPNG 196
+H Q+PN
Sbjct: 192 GVVHHQLPNN 201
>AT3G25910.1 | chr3:9489836-9490954 FORWARD LENGTH=373
Length = 372
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%)
Query: 101 NTTDRPACPLCRGDVIGWVVIDEARLHLNQKKRCCEESCCSYVGNFHELQKHTQQKHPNS 160
N + CPLCRG + WVV+ AR +N K R C C + G++ +L+KH + HP
Sbjct: 169 NKPQKLTCPLCRGHIKEWVVVKAARCFMNSKHRSCSCETCDFSGSYSDLRKHARLLHPGV 228
Query: 161 RPSEIDPARRVDWENFQQSSDIIDVLSTIHAQVPNGIVLGD 201
RPSE DP R+ W ++ SD+ D+LST+ + + D
Sbjct: 229 RPSEADPERQRSWRRLERQSDLGDLLSTLQSSFGGDEISND 269
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 24 KSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGA 75
K W E+ CP+C++ PHN +LL C+SYE GCRP++CDT SNC ++F+ A
Sbjct: 36 KEW-EEARCPVCMEHPHNGILLICSSYENGCRPYMCDTSHRHSNCFDQFRKA 86
>AT2G26050.1 | chr2:11098652-11099380 REVERSE LENGTH=222
Length = 221
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 52 KGCRPFICDTDQSRSNCLERFKGAHGLPTNMKVPSFNGAPLDSIHIISSNTTDRPACPLC 111
+GC P++CDT SNC ++F+ K P ++H CPLC
Sbjct: 38 RGCHPYMCDTSVRHSNCFKQFR--------RKTIKKRLYP-KTLH-----------CPLC 77
Query: 112 RGDVIGWV-VIDEARLHLNQKKRCCEESCCSYVGNFHELQKHTQQKHPNSRPSEIDPARR 170
RG+V V AR +N K R C C + G F +L KH + +H P ++DP R+
Sbjct: 78 RGEVSETTKVTSTARRFMNAKPRSCSVEDCKFSGTFSQLTKHLKTEHRGIVPPKVDPLRQ 137
Query: 171 VDWENFQQSSDIIDVLS 187
WE ++ S+ +++++
Sbjct: 138 QRWEMMERHSEYVELMT 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,192,369
Number of extensions: 244856
Number of successful extensions: 563
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 553
Number of HSP's successfully gapped: 11
Length of query: 320
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 221
Effective length of database: 8,392,385
Effective search space: 1854717085
Effective search space used: 1854717085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)