BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0146700 Os02g0146700|AK105609
(898 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20580.1 | chr2:8859211-8864699 FORWARD LENGTH=892 1202 0.0
AT4G28470.1 | chr4:14067082-14072357 REVERSE LENGTH=892 1181 0.0
AT4G08140.1 | chr4:5135673-5136140 FORWARD LENGTH=85 102 7e-22
>AT2G20580.1 | chr2:8859211-8864699 FORWARD LENGTH=892
Length = 891
Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/848 (69%), Positives = 697/848 (82%), Gaps = 6/848 (0%)
Query: 52 QLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMP 111
LELYV R QD +P +QK ALESMRQEIR++TSSMTSVPKPLKFLRPHYGTLK++ ETM
Sbjct: 49 NLELYVERVQDPNPELQKAALESMRQEIRASTSSMTSVPKPLKFLRPHYGTLKAFHETMA 108
Query: 112 ESSDLKRYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQ 171
+S DLK+Y++DILSVLALTMSA+GERESL++RL+G+EGDIGSWGHEYVRNLAGEIAQE+
Sbjct: 109 DS-DLKKYLSDILSVLALTMSADGERESLRFRLIGTEGDIGSWGHEYVRNLAGEIAQEYT 167
Query: 172 KRQDDDMPIDALMELVQQIVSFHMKHNAEPXXXXXXXXXXXXXXXXXXXXSTNYKRTCLY 231
KRQ ++ ID LMELVQQIV+FHMKHNAE TN+KRTC Y
Sbjct: 168 KRQSEEASIDDLMELVQQIVAFHMKHNAETEAVDLLMDVEDLDLLLEHVDKTNFKRTCNY 227
Query: 232 LTSSSKYLPAPDDMLALDIAYTIYMKFEDLTSALRIALLLDNKSMQYVKQVYTATEDLQL 291
LTS+++YLP PDDML LDI+Y IYMKFE+ +AL+IAL LDN QYVKQV+T+ DL
Sbjct: 228 LTSAARYLPGPDDMLVLDISYMIYMKFEEYPNALQIALFLDNT--QYVKQVFTSCTDLLK 285
Query: 292 KKQFSFIIARHGLAMEIDDEIAADGNDKEGLQEIVNNSKLSEGYLTLARDIEVMEAKSPE 351
KKQF ++IARHG+ E+DDE+ AD +D+E LQ+IVNN+KLSEGYLTLARDIEVMEAK+PE
Sbjct: 286 KKQFCYMIARHGITFELDDEMVADDDDREALQDIVNNTKLSEGYLTLARDIEVMEAKTPE 345
Query: 352 DIYKVHLIDGRGAS-SSLDSARQNLAATFVNAFVNAGFGQDKLMTAPXXXXXXXXXXNWL 410
DIYK HL+DGR +S +S+DSARQNLAATFVNAFVNAGFGQDKLMT P NWL
Sbjct: 346 DIYKAHLLDGRASSGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSTTGSSG-NWL 404
Query: 411 FKNKEHGKASAAASLGMILLWDTDSGLAQLDKYLHSNDAHVVAGALLGIGIVTCGVKNDC 470
FKNKEHGK SAAASLGMI LWD DSGL+QLDKY HSND ++AGALLG+GIV CG+KNDC
Sbjct: 405 FKNKEHGKTSAAASLGMIQLWDVDSGLSQLDKYFHSNDNPIIAGALLGVGIVNCGIKNDC 464
Query: 471 DPALAILMEYINKDDTNXXXXXXXXXXXXXXXSQKEELKSYLSTVLGDSEKSTLEVLIFS 530
DPALA+L +YI+K+D++ SQ +++++ LS +L D+ K+ L+V+ F+
Sbjct: 465 DPALALLGDYIDKEDSSVRIGAIMGLGISYAGSQNDQIRNKLSPILNDA-KAPLDVIAFA 523
Query: 531 AIALGLVFVGSCNEEIAQSIIFALMERSEAELAEPIIRXXXXXXXXXXXGKQESVEATAE 590
+++LG+++VGSCNEE+AQSIIFALM+RSEAEL + + R GKQESVEATAE
Sbjct: 524 SLSLGMIYVGSCNEEVAQSIIFALMDRSEAELGDALTRFLPLGLGLLYLGKQESVEATAE 583
Query: 591 VSKTFDEKIRKYCDVTLMSLAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIA 650
VSKTF+EKIRKYCD+TL+S AYAGTGNVLKVQ LL C +HLEKG+ HQGPAVLG+A++A
Sbjct: 584 VSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQDLLAQCGEHLEKGDIHQGPAVLGLAMVA 643
Query: 651 MAEELGAEMAVRSLERLLQYGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADV 710
M+EELG +M +RSLER+LQYGEQNIRRAVPLALG+LCISNPKV VMDTLSRLSHD D++V
Sbjct: 644 MSEELGVDMEIRSLERMLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEV 703
Query: 711 SMAAIISLGFIGAGTNNARIAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPY 770
+M+AIISLG IGAGTNNARIAGMLRNLSSYYYK+ + LFCVRIAQGLVH+GKGLLTLSP+
Sbjct: 704 AMSAIISLGLIGAGTNNARIAGMLRNLSSYYYKDMSLLFCVRIAQGLVHMGKGLLTLSPF 763
Query: 771 HSDRFLLSPMALGGLVTVLHACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLS 830
HS+RFLLSP AL G+VT+LHACLDMK ILGKYHY+LY +VLAMQPRM+LTVDE+LKPLS
Sbjct: 764 HSERFLLSPTALAGIVTLLHACLDMKPIILGKYHYVLYFLVLAMQPRMMLTVDENLKPLS 823
Query: 831 XXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGERAELATEKYIPLTSVLEGFVILK 890
PKTITGFQTHSTPVLLAAGERAELAT+KYIPL+ +LEGF+ILK
Sbjct: 824 VPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILK 883
Query: 891 KNPEYNEE 898
+NP+Y EE
Sbjct: 884 ENPDYREE 891
>AT4G28470.1 | chr4:14067082-14072357 REVERSE LENGTH=892
Length = 891
Score = 1181 bits (3056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/848 (68%), Positives = 676/848 (79%), Gaps = 6/848 (0%)
Query: 52 QLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMP 111
LELYV R QD +P +QK+ALESMR+EIR +TSSMTSVPKPLKFLRPHYG LK + M
Sbjct: 49 NLELYVERVQDPNPELQKIALESMRKEIRDSTSSMTSVPKPLKFLRPHYGVLKEFHAKMA 108
Query: 112 ESSDLKRYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQ 171
ES DLK+ +ADILSVLALTMSAEGERESL YRL GSE DIGSWGHEYVRNLAGEIA+E+
Sbjct: 109 ES-DLKKMLADILSVLALTMSAEGERESLNYRLNGSESDIGSWGHEYVRNLAGEIAKEYT 167
Query: 172 KRQDDDMPIDALMELVQQIVSFHMKHNAEPXXXXXXXXXXXXXXXXXXXXSTNYKRTCLY 231
RQ ++ I+ LM+LVQQIVSFHMKHNAE +TN++RTC Y
Sbjct: 168 IRQGEESSIEDLMDLVQQIVSFHMKHNAETEAVDLLMDVEDLDLLLEHVDNTNFRRTCNY 227
Query: 232 LTSSSKYLPAPDDMLALDIAYTIYMKFEDLTSALRIALLLDNKSMQYVKQVYTATEDLQL 291
LTS++KYLP PDDML LDIAY IY+KF + +AL+IAL LDN MQYVKQV+T+ DL
Sbjct: 228 LTSAAKYLPGPDDMLVLDIAYMIYIKFAEYPNALQIALFLDN--MQYVKQVFTSCTDLVK 285
Query: 292 KKQFSFIIARHGLAMEIDDEIAADGNDKEGLQEIVNNSKLSEGYLTLARDIEVMEAKSPE 351
KKQF ++IARHG+ E+D E+ A+ DKE LQ+IVNNSKLSEGYLTLARDIEVMEAK+PE
Sbjct: 286 KKQFCYMIARHGMTFELDQEMVANDEDKEALQDIVNNSKLSEGYLTLARDIEVMEAKTPE 345
Query: 352 DIYKVHLIDGRGASS-SLDSARQNLAATFVNAFVNAGFGQDKLMTAPXXXXXXXXXXNWL 410
DIYK HL+DGR +S S+DSARQNL+ATFVNAFVNAGFGQDKLMT P NWL
Sbjct: 346 DIYKAHLLDGRASSGPSVDSARQNLSATFVNAFVNAGFGQDKLMTVPSDSTSGSAG-NWL 404
Query: 411 FKNKEHGKASAAASLGMILLWDTDSGLAQLDKYLHSNDAHVVAGALLGIGIVTCGVKNDC 470
FKNKEHGK SA ASLGMI LWD ++GL LDKY HSND VVAGALLG+GIV CG+KNDC
Sbjct: 405 FKNKEHGKTSAVASLGMIQLWDVETGLGHLDKYFHSNDNPVVAGALLGVGIVNCGIKNDC 464
Query: 471 DPALAILMEYINKDDTNXXXXXXXXXXXXXXXSQKEELKSYLSTVLGDSEKSTLEVLIFS 530
DPA A+L YI+ +D++ SQ +++K LS +L D+ + L+V+ F+
Sbjct: 465 DPAFALLSGYIDNEDSSVRIGAIMGLGIAYAGSQNDQIKIRLSPILNDA-NAPLDVIAFA 523
Query: 531 AIALGLVFVGSCNEEIAQSIIFALMERSEAELAEPIIRXXXXXXXXXXXGKQESVEATAE 590
A++LG+++VGSCNEE+AQSIIFALM+RSEAEL E + R GKQESVEATAE
Sbjct: 524 ALSLGMIYVGSCNEEVAQSIIFALMDRSEAELGEALTRFLPLGLGLLYLGKQESVEATAE 583
Query: 591 VSKTFDEKIRKYCDVTLMSLAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIA 650
VSKTF+EKIRKYCD+TL+S AYAGTGNVLKVQ LL C +HL KG+ HQGPAV+G+A++A
Sbjct: 584 VSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQDLLAQCGEHLVKGDIHQGPAVIGLAMVA 643
Query: 651 MAEELGAEMAVRSLERLLQYGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADV 710
M+EELG +M +RSLER+LQYGEQNIRRAVPLALG+LCISNPKV VMDTLSRLSHD D++V
Sbjct: 644 MSEELGLDMEIRSLERVLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEV 703
Query: 711 SMAAIISLGFIGAGTNNARIAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPY 770
+MAAIISLG IGAGTNNARIAGMLRNLSSYYYK+A+ LFCVRIAQG VH+GKGLLTL+P+
Sbjct: 704 AMAAIISLGLIGAGTNNARIAGMLRNLSSYYYKDASLLFCVRIAQGFVHMGKGLLTLNPF 763
Query: 771 HSDRFLLSPMALGGLVTVLHACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLS 830
HS+R LLSP AL G+VT+LHACLDMKS ILGKYHY+LY +VLAMQPRM+LTVD+ LKP+S
Sbjct: 764 HSERLLLSPTALAGIVTLLHACLDMKSIILGKYHYVLYFLVLAMQPRMMLTVDQSLKPIS 823
Query: 831 XXXXXXXXXXXXXXXXXPKTITGFQTHSTPVLLAAGERAELATEKYIPLTSVLEGFVILK 890
PKTITGFQTHSTPVLLAAGERAELATEKYIPL+ +LEGFVILK
Sbjct: 824 VPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLSPILEGFVILK 883
Query: 891 KNPEYNEE 898
+NP+Y EE
Sbjct: 884 ENPDYREE 891
>AT4G08140.1 | chr4:5135673-5136140 FORWARD LENGTH=85
Length = 84
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 60 AQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMPESSDLKRY 119
QD +P +QK ALESMRQEIR+ TSSMTSVPKPLKFLRP Y TLK++ ETM + S+LK+Y
Sbjct: 2 VQDPNPDLQKAALESMRQEIRALTSSMTSVPKPLKFLRPQYVTLKAFHETMAD-SNLKKY 60
Query: 120 MADILSVLALT 130
++DILSVLALT
Sbjct: 61 ISDILSVLALT 71
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,112,474
Number of extensions: 561836
Number of successful extensions: 1424
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1402
Number of HSP's successfully gapped: 5
Length of query: 898
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 791
Effective length of database: 8,173,057
Effective search space: 6464888087
Effective search space used: 6464888087
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)