BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0139500 Os02g0139500|AK103080
(141 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G07050.1 | chr2:2924629-2930295 FORWARD LENGTH=760 149 4e-37
AT3G45130.1 | chr3:16512552-16517522 REVERSE LENGTH=757 145 8e-36
AT1G78955.1 | chr1:29689153-29694255 REVERSE LENGTH=770 135 7e-33
AT1G78960.1 | chr1:29696722-29701024 FORWARD LENGTH=764 124 2e-29
AT1G78970.2 | chr1:29703414-29707715 FORWARD LENGTH=758 121 1e-28
AT1G78950.1 | chr1:29684558-29688673 REVERSE LENGTH=760 119 7e-28
AT1G66960.1 | chr1:24985155-24989664 REVERSE LENGTH=764 109 6e-25
AT1G78500.1 | chr1:29531646-29535177 FORWARD LENGTH=768 107 2e-24
AT3G29255.1 | chr3:11209586-11213909 FORWARD LENGTH=707 104 2e-23
AT4G15340.1 | chr4:8754670-8760589 REVERSE LENGTH=767 103 2e-23
AT5G48010.2 | chr5:19457001-19461538 FORWARD LENGTH=767 96 6e-21
AT4G15370.1 | chr4:8773786-8779685 REVERSE LENGTH=760 95 9e-21
AT5G36150.1 | chr5:14220737-14225422 REVERSE LENGTH=761 95 1e-20
AT5G42600.1 | chr5:17053566-17057975 FORWARD LENGTH=762 87 2e-18
>AT2G07050.1 | chr2:2924629-2930295 FORWARD LENGTH=760
Length = 759
Score = 149 bits (376), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 79/94 (84%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C KVY+NL+G R H VNT+WAMLALI AGQ E D PLHRAAR LIN Q+E+G+FPQQE
Sbjct: 662 CQDKVYSNLDGNRSHVVNTAWAMLALIGAGQAEVDRKPLHRAARYLINAQMENGDFPQQE 721
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVLL 128
I+G F++NC I+Y+ YRNIFPIWALGEYRC+VLL
Sbjct: 722 IMGVFNRNCMITYAAYRNIFPIWALGEYRCQVLL 755
>AT3G45130.1 | chr3:16512552-16517522 REVERSE LENGTH=757
Length = 756
Score = 145 bits (365), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 76/93 (81%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C KVYTNL G + H VNTSWA+LALI+AGQ RDP PLHR A+ LIN Q+EDG++PQQE
Sbjct: 662 CQNKVYTNLPGNKSHIVNTSWALLALIEAGQASRDPMPLHRGAKSLINSQMEDGDYPQQE 721
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVL 127
I+G F++NC ISYS YRNIFPIWALGEYR +L
Sbjct: 722 ILGVFNRNCMISYSAYRNIFPIWALGEYRKLML 754
>AT1G78955.1 | chr1:29689153-29694255 REVERSE LENGTH=770
Length = 769
Score = 135 bits (340), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 75/101 (74%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C K Y EGER + V TSWAM+ L+ AGQ ERDP+PLHRAA++LIN QLE+G+FPQQE
Sbjct: 665 CPKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFPQQE 724
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVLLGRQDASV 135
I GAF KNC + Y+ YRNIFP+WAL EYR RV L + S
Sbjct: 725 ITGAFMKNCLLHYAAYRNIFPVWALAEYRRRVPLPYEKPST 765
>AT1G78960.1 | chr1:29696722-29701024 FORWARD LENGTH=764
Length = 763
Score = 124 bits (310), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C + Y LEG R + V T+WAM+ LI AGQ ERDP PLHRAA+++I QLE+G+FPQQE
Sbjct: 665 CPEQRYIPLEGNRSNLVQTAWAMMGLIHAGQAERDPTPLHRAAKLIITSQLENGDFPQQE 724
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVLLGRQD 132
I+G F C + Y+ YRNIFP+WAL EYR QD
Sbjct: 725 ILGVFMNTCMLHYATYRNIFPLWALAEYRKAAFATHQD 762
>AT1G78970.2 | chr1:29703414-29707715 FORWARD LENGTH=758
Length = 757
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 68/94 (72%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C + Y EGER + V TSWAM+ALI GQ ERD PLHRAA+++IN QLE+G+FPQQE
Sbjct: 662 CSEQRYIPSEGERSNLVQTSWAMMALIHTGQAERDLIPLHRAAKLIINSQLENGDFPQQE 721
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVLL 128
I+GAF C + Y+ YRN FP+WAL EYR V +
Sbjct: 722 IVGAFMNTCMLHYATYRNTFPLWALAEYRKVVFI 755
>AT1G78950.1 | chr1:29684558-29688673 REVERSE LENGTH=760
Length = 759
Score = 119 bits (297), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 67/94 (71%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C K+Y GE + V T+WA++ LI +GQ ERDP PLHRAA+++IN QLE G+FPQQ+
Sbjct: 665 CSKKIYIAQVGEISNVVQTAWALMGLIHSGQAERDPIPLHRAAKLIINSQLESGDFPQQQ 724
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVLL 128
G F KNC + Y+ YRNI P+WAL EYR RV L
Sbjct: 725 ATGVFLKNCTLHYAAYRNIHPLWALAEYRARVSL 758
>AT1G66960.1 | chr1:24985155-24989664 REVERSE LENGTH=764
Length = 763
Score = 109 bits (272), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C + Y LEG R + V T+WAM+ALI AGQ +RD PLH AA+ +I QLE+G+FPQQE
Sbjct: 665 CPEQRYIPLEGNRSNVVQTAWAMMALIHAGQAKRDLIPLHSAAKFIITSQLENGDFPQQE 724
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYRCRVLLGRQD 132
++GA C + YS Y++IFP WAL EYR + D
Sbjct: 725 LLGASMSTCMLHYSTYKDIFPPWALAEYRKAAFIHHAD 762
>AT1G78500.1 | chr1:29531646-29535177 FORWARD LENGTH=768
Length = 767
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 63/88 (71%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C K YT LEG R + VNT A++ LI GQ ERDP P+HRAA++LIN QL++G+FPQ+E
Sbjct: 671 CPNKKYTLLEGNRTNVVNTGQALMVLIMGGQMERDPLPVHRAAKVLINSQLDNGDFPQEE 730
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEY 122
I+G F N + Y+ YRNIF +WAL Y
Sbjct: 731 IMGVFKMNVMVHYATYRNIFTLWALTYY 758
>AT3G29255.1 | chr3:11209586-11213909 FORWARD LENGTH=707
Length = 706
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C K Y +LEG + + VNT AM+ LI +GQ ERDP P+HRAA++LIN Q+E+G+FPQQE
Sbjct: 611 CPGKKYISLEGNKTNVVNTGQAMMVLIMSGQMERDPLPVHRAAKVLINSQMENGDFPQQE 670
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEY 122
+ G + N + Y YRNIF +WAL Y
Sbjct: 671 LRGVYKMNVLLHYPTYRNIFSLWALTYY 698
>AT4G15340.1 | chr4:8754670-8760589 REVERSE LENGTH=767
Length = 766
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
CL K YT L G + + V+T A++ LI GQ ERDP P+HRAA+++INLQL++G+FPQQE
Sbjct: 670 CLRKKYTPLAGNKTNIVSTGQALMVLIMGGQMERDPLPVHRAAKVVINLQLDNGDFPQQE 729
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEY 122
++G F+ N + Y YRNI+ +WAL Y
Sbjct: 730 VMGVFNMNVLLHYPTYRNIYSLWALTLY 757
>AT5G48010.2 | chr5:19457001-19461538 FORWARD LENGTH=767
Length = 766
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C +K YT L+G + V T+ A++ LI Q ERDP P+HRAA++LIN QL++G+FPQQE
Sbjct: 670 CPSKKYTPLKGNSTNVVQTAQALMVLIMGDQMERDPLPVHRAAQVLINSQLDNGDFPQQE 729
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEY 122
I+G F + + + YRN F +WAL Y
Sbjct: 730 IMGTFMRTVMLHFPTYRNTFSLWALTHY 757
>AT4G15370.1 | chr4:8773786-8779685 REVERSE LENGTH=760
Length = 759
Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C K Y L G + + VNT A++ LI Q +RDP P+HRAA++LIN Q+++G+FPQQE
Sbjct: 665 CPRKKYIPLIGNKTNVVNTGQALMVLIMGNQMKRDPLPVHRAAKVLINSQMDNGDFPQQE 724
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEY 122
I+G F N + + YRN+F +WAL Y
Sbjct: 725 IMGVFKMNVMLHFPTYRNMFTLWALTHY 752
>AT5G36150.1 | chr5:14220737-14225422 REVERSE LENGTH=761
Length = 760
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 35 CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDGEFPQQE 94
C K Y LEG + VNT A++ LI GQ +RDP P+HRAA++LIN Q+++G+FPQQE
Sbjct: 665 CPNKNYIPLEGNKTDVVNTGQALMVLIMGGQMDRDPLPVHRAAKVLINSQMDNGDFPQQE 724
Query: 95 IIGAFSKNCAISYSQYRNIFPIWALGEYR--CRVLL 128
I G + N +++ +RN F +WAL Y R+LL
Sbjct: 725 IRGVYKMNVMLNFPTFRNSFTLWALTHYTKAIRLLL 760
>AT5G42600.1 | chr5:17053566-17057975 FORWARD LENGTH=762
Length = 761
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 30 GEKAI-CLAKVYTNLEGERPHGVNTSWAMLALIDAGQGERDPAPLHRAARILINLQLEDG 88
GE A+ C K Y +G + VNT AM+ L+ GQ ERDP+P+HRAA++LIN QL+ G
Sbjct: 660 GESALSCPNKKYIPSKGNVTNVVNTGQAMMVLLIGGQMERDPSPVHRAAKVLINSQLDIG 719
Query: 89 EFPQQEIIGAFSKNCAISYSQYRNIFPIWALGEY 122
+FPQQE G + N + Y YRN+F +WAL Y
Sbjct: 720 DFPQQERRGIYM-NMLLHYPTYRNMFSLWALALY 752
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,024,015
Number of extensions: 115179
Number of successful extensions: 233
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 232
Number of HSP's successfully gapped: 14
Length of query: 141
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 52
Effective length of database: 8,666,545
Effective search space: 450660340
Effective search space used: 450660340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 106 (45.4 bits)