BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0128200 Os02g0128200|AK111901
(347 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32150.1 | chr1:11566022-11568317 FORWARD LENGTH=390 191 7e-49
AT2G35530.1 | chr2:14923280-14926025 REVERSE LENGTH=410 190 1e-48
AT4G36730.1 | chr4:17309850-17311752 REVERSE LENGTH=316 137 1e-32
AT2G46270.1 | chr2:19000859-19002901 FORWARD LENGTH=383 99 4e-21
AT4G01120.1 | chr4:481929-483970 REVERSE LENGTH=361 90 1e-18
AT1G13600.1 | chr1:4650787-4651377 REVERSE LENGTH=197 59 6e-09
AT1G75390.1 | chr1:28292224-28292745 FORWARD LENGTH=174 58 6e-09
AT5G38800.1 | chr5:15538305-15538802 REVERSE LENGTH=166 58 9e-09
AT3G30530.1 | chr3:12139512-12140033 FORWARD LENGTH=174 57 2e-08
AT5G15830.1 | chr5:5168591-5169151 FORWARD LENGTH=187 55 6e-08
AT2G04038.1 | chr2:1331919-1332419 FORWARD LENGTH=167 55 6e-08
AT4G34000.1 | chr4:16296008-16297971 FORWARD LENGTH=455 54 1e-07
AT1G19490.1 | chr1:6751953-6753959 REVERSE LENGTH=472 54 2e-07
AT3G49760.1 | chr3:18455569-18456039 REVERSE LENGTH=157 54 2e-07
AT1G49720.2 | chr1:18400826-18402362 FORWARD LENGTH=404 53 3e-07
AT1G68880.1 | chr1:25894499-25894915 REVERSE LENGTH=139 52 4e-07
AT2G18160.1 | chr2:7898288-7898803 REVERSE LENGTH=172 51 8e-07
AT5G24800.1 | chr5:8515259-8516541 FORWARD LENGTH=278 51 9e-07
AT5G42910.1 | chr5:17203908-17205211 FORWARD LENGTH=371 50 2e-06
>AT1G32150.1 | chr1:11566022-11568317 FORWARD LENGTH=390
Length = 389
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 187/382 (48%), Gaps = 53/382 (13%)
Query: 5 DPGTPSKATKASEP----EQSPATTSGTTAPVYPEWPGFQAYSAIPPHGFFPPPVAASPQ 60
+P T +T +S P Q P++ V +W GFQAYS +PPHG+ VA+SPQ
Sbjct: 14 EPKTTPPSTSSSAPATVVSQEPSSAVSAGVAVTQDWSGFQAYSPMPPHGY----VASSPQ 69
Query: 61 AHPYMWGAQXXXXXXXXXXXXXXXXX--XXXXAHPSTP-GVHPFNHYPMLA-NGNVETAG 116
HPYMWG Q AHPS P G +P++ Y M + NG E +G
Sbjct: 70 PHPYMWGVQHMMPPYGTPPHPYVTMYPPGGMYAHPSLPPGSYPYSPYAMPSPNGMAEASG 129
Query: 117 TAPGASEINGK---------------------------NELGRTSGPSANGITSHXXXXX 149
E +GK NE G+ SG SANG S
Sbjct: 130 NTGSVIEGDGKPSDGKEKLPIKRSKGSLGSLNMIIGKNNEAGKNSGASANGACSKSAESG 189
Query: 150 XXXXXXXD-ANSQNDSHSKENDVKEDGSSQNGISHTALNQNMSMAPTQTGVVI------G 202
ANSQNDS S+ N + +S++G S +N S P V I G
Sbjct: 190 SDGSSDGSDANSQNDSGSRHNGKDGETASESGGSAHGPPRNGSNLPVNQTVAIMPVSATG 249
Query: 203 GVAPTTNLNIGMDYWGAAG--SSPVPAMHGKASSGSVRGEQWDERELKKQKRKQSNRESA 260
P TNLNIGMDYW G S VP + S + DERE+K+Q+RKQSNRESA
Sbjct: 250 VPGPPTNLNIGMDYWSGHGNVSGAVPGVVVDGSQSQPWLQVSDEREIKRQRRKQSNRESA 309
Query: 261 RRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNASLKEKLEGNSDSI 320
RRSRLRKQAEC+EL+ RA+ L ENSSLRAE+ ++K +YE LL+ N+SLK K S
Sbjct: 310 RRSRLRKQAECDELAQRAEVLNGENSSLRAEINKLKSQYEELLAENSSLKNKF----SSA 365
Query: 321 PYMNEQNDTNGTHQKQQDSDAQ 342
P + E D + Q+ Q S Q
Sbjct: 366 PSL-EGGDLDKNEQEPQRSTRQ 386
>AT2G35530.1 | chr2:14923280-14926025 REVERSE LENGTH=410
Length = 409
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 175/338 (51%), Gaps = 65/338 (19%)
Query: 34 PEWPGFQAYSAIPP-HGFFPPPVAASPQAHPYMWGAQXXXXXXXXXXXXXXXXX--XXXX 90
P+W GFQAYS +PP HG+ VA+SPQ HPYMWG Q
Sbjct: 42 PDWSGFQAYSPMPPPHGY----VASSPQPHPYMWGVQHMMPPYGTPPHPYVAMYPPGGMY 97
Query: 91 AHPSTP-GVHPFNHYPMLA-NGNVETAGTAPGASE------------------------- 123
AHPS P G +P++ Y M + NG E +G G ++
Sbjct: 98 AHPSMPPGSYPYSPYAMPSPNGMTEVSGNTTGGTDGDAKQSEVKEKLPIKRSRGSLGSLN 157
Query: 124 -INGKN-ELGRTSGPSANGITSHXXXXXXXXXXX-XDANSQNDSHSKENDVKEDGSSQNG 180
I GKN E G+ SG SANG S D NSQNDS S + + +S+NG
Sbjct: 158 MITGKNNEPGKNSGASANGAYSKSGESASDGSSEGSDGNSQNDSGSGLDGKDAEAASENG 217
Query: 181 ISHTA------------LNQNMSMAPTQTGVVIGGVAPTTNLNIGMDYWGAAGSSPVPAM 228
S ++Q + + P V G P TNLNIGMDYWGA S+ +P M
Sbjct: 218 GSANGPQNGSAGTPILPVSQTVPIMPMTAAGVPG---PPTNLNIGMDYWGAPTSAGIPGM 274
Query: 229 HGKASS--------GSVRG---EQW--DERELKKQKRKQSNRESARRSRLRKQAECEELS 275
HGK S+ GS G + W D+RELK+Q+RKQSNRESARRSRLRKQAEC+EL+
Sbjct: 275 HGKVSTPVPGVVAPGSRDGGHSQPWLQDDRELKRQRRKQSNRESARRSRLRKQAECDELA 334
Query: 276 VRADNLRAENSSLRAELERIKKEYEALLSHNASLKEKL 313
RA+ L EN++LRAE+ ++K + E L + N SLK++L
Sbjct: 335 QRAEVLNEENTNLRAEINKLKSQCEELTTENTSLKDQL 372
>AT4G36730.1 | chr4:17309850-17311752 REVERSE LENGTH=316
Length = 315
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 149/330 (45%), Gaps = 56/330 (16%)
Query: 1 MGTNDPGTPSKATKASEPEQSPATTSGTTAPV-YPEWP-GFQAY--SAIPPHGFFPPPVA 56
MGT++ P K TK P +++ P YP+W QAY P+ FFP PV
Sbjct: 1 MGTSEDKMPFKTTK-------PTSSAQEVPPTPYPDWQNSMQAYYGGGGTPNPFFPSPVG 53
Query: 57 ASPQAHPYMWGAQXXXXXXXXXXXXXXXXX--XXXXAHPSTP---GVHPFNHYPMLANGN 111
SP HPYMWGAQ AHPS P P N P +
Sbjct: 54 -SPSPHPYMWGAQHHMMPPYGTPVPYPAMYPPGAVYAHPSMPMPPNSGPTNKEPAKDQAS 112
Query: 112 VETAGTAPGASEINGKNELGRTSGPSANGITSHXXXXXXXXXXXXDANSQNDSHSKENDV 171
+ + G L SG S N SH S S END
Sbjct: 113 GKKSKGNSKKKAEGGDKAL---SG-SGNDGASHSD------------ESVTAGSSDENDE 156
Query: 172 KEDGSSQNGISHTALNQNMSMAPTQ--TGVVIGGV-----APTTNLNIGMDYWGAAGSSP 224
+ Q I + Q ++ A +Q TG + G V AP TNLNIGMD W + P
Sbjct: 157 NANQQEQGSIRKPSFGQMLADASSQSTTGEIQGSVPMKPVAPGTNLNIGMDLWSSQAGVP 216
Query: 225 VPAMHGKASSGSVRGEQWDERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAE 284
V DERELK+QKRKQSNRESARRSRLRKQAECE+L R ++L E
Sbjct: 217 VK----------------DERELKRQKRKQSNRESARRSRLRKQAECEQLQQRVESLSNE 260
Query: 285 NSSLRAELERIKKEYEALLSHNASLKEKLE 314
N SLR EL+R+ E + L S N S++++L+
Sbjct: 261 NQSLRDELQRLSSECDKLKSENNSIQDELQ 290
>AT2G46270.1 | chr2:19000859-19002901 FORWARD LENGTH=383
Length = 382
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 150/339 (44%), Gaps = 47/339 (13%)
Query: 5 DPGTPSKATKASEPEQSPATTSGTTAPVYPEWPGFQAY----SAIPPHGFFPPPVAASPQ 60
+P P+K+ K S P T VYP+W QAY A+PP ++ +AAS
Sbjct: 7 EPKPPTKSDKPSSP-----PVDQTNVHVYPDWAAMQAYYGPRVAMPP--YYNSAMAAS-- 57
Query: 61 AHP---YMWGAQXXXXXXXXXXXXXXXXXXXXXAHPSTPGVHPFNHYPMLANGNVETAGT 117
HP YMW Q AHP P L G + T
Sbjct: 58 GHPPPPYMWNPQHMMSPYGAPYAAVYPHGGGVYAHPGIP-------MGSLPQGQKDPPLT 110
Query: 118 APGASEINGKNELGRTSGPSANGITSHXXXXXXXXXXXXDANSQN--DSH-----SKEND 170
PG + + +++G + NG+ + N +N D H S E D
Sbjct: 111 TPGT--LLSIDTPTKSTGNTDNGLMKKLKEFDGLAMSLGNGNPENGADEHKRSRNSSETD 168
Query: 171 VKEDGSSQN--GISHTALNQNMSMAPTQTGVVIGGVAPTTNL-----NIGMDYWGAAGSS 223
DGS N G L ++ PT+ G + + ++ + G+ +G+
Sbjct: 169 GSTDGSDGNTTGADEPKLKRSREGTPTKDGKQLVQASSFHSVSPSSGDTGVKLIQGSGAI 228
Query: 224 PVPAMHGKA------SSGSVRGEQW--DERELKKQKRKQSNRESARRSRLRKQAECEELS 275
P + + S V E W +ERELK+++RKQSNRESARRSRLRKQAE EEL+
Sbjct: 229 LSPGVSANSNPFMSQSLAMVPPETWLQNERELKRERRKQSNRESARRSRLRKQAETEELA 288
Query: 276 VRADNLRAENSSLRAELERIKKEYEALLSHNASLKEKLE 314
+ + L AEN +LR+EL ++ ++ + L NA+L +KL+
Sbjct: 289 RKVEALTAENMALRSELNQLNEKSDKLRGANATLLDKLK 327
>AT4G01120.1 | chr4:481929-483970 REVERSE LENGTH=361
Length = 360
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 242 WDERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEA 301
W+E+E+K++KRKQSNRESARRSRLRKQAE E+LSV+ D L AEN SLR++L ++ E E
Sbjct: 245 WNEKEVKREKRKQSNRESARRSRLRKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEK 304
Query: 302 LLSHNASLKEKLE 314
L N ++ ++L+
Sbjct: 305 LRLENEAILDQLK 317
>AT1G13600.1 | chr1:4650787-4651377 REVERSE LENGTH=197
Length = 196
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 248 KKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNA 307
+KQ+R SNRESARRSR+RKQ +EL + LR +N L +L R+ + +E L NA
Sbjct: 86 RKQRRMISNRESARRSRMRKQRHLDELWSQVIRLRTDNHCLMDKLNRVSESHELALKENA 145
Query: 308 SLKEK 312
LKE+
Sbjct: 146 KLKEE 150
>AT1G75390.1 | chr1:28292224-28292745 FORWARD LENGTH=174
Length = 173
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 220 AGSSPVPAMHGKASSGS---VRGEQWDERELKKQKRKQSNRESARRSRLRKQAECEELSV 276
+G+ + G A+SGS +R Q D + +K+KRKQSNRESARRSR+RKQ ++L+
Sbjct: 12 SGNCSSVSTTGLANSGSESDLR--QRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTA 69
Query: 277 RADNLRAENSSLRAELERIKKEYEALLSHNASLKEKLEGNSDSIPYMNEQND 328
+ +LR EN+ + A + + Y + + N L+ ++ + + +NE D
Sbjct: 70 QVTHLRKENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVD 121
>AT5G38800.1 | chr5:15538305-15538802 REVERSE LENGTH=166
Length = 165
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%)
Query: 248 KKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNA 307
+KQKRK SNRESARRSR+RKQ + +EL + LR EN L +L + + E ++ N
Sbjct: 72 RKQKRKISNRESARRSRMRKQRQVDELWSQVMWLRDENHQLLRKLNCVLESQEKVIEENV 131
Query: 308 SLKEKLEGNSDSIPYMNEQN 327
LKE+ I M QN
Sbjct: 132 QLKEETTELKQMISDMQLQN 151
>AT3G30530.1 | chr3:12139512-12140033 FORWARD LENGTH=174
Length = 173
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 248 KKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNA 307
+KQ+R SNRESARRSR+RKQ +EL + LR EN L +L + + ++ +L NA
Sbjct: 81 RKQRRMISNRESARRSRMRKQRHLDELWSQVMWLRIENHQLLDKLNNLSESHDKVLQENA 140
Query: 308 SLKEK 312
LKE+
Sbjct: 141 QLKEE 145
>AT5G15830.1 | chr5:5168591-5169151 FORWARD LENGTH=187
Length = 186
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 248 KKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNA 307
+KQ+R SNRESARRSR+RKQ +EL + LR+EN L +L ++ + ++ N+
Sbjct: 74 RKQRRMVSNRESARRSRMRKQRHLDELLSQVAWLRSENHQLLDKLNQVSDNNDLVIQENS 133
Query: 308 SLKEK 312
SLKE+
Sbjct: 134 SLKEE 138
>AT2G04038.1 | chr2:1331919-1332419 FORWARD LENGTH=167
Length = 166
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 243 DERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEAL 302
DER KQ+R SNRESARRSR+RKQ +EL + LR EN+ L +L R+ + +
Sbjct: 72 DER---KQRRMLSNRESARRSRMRKQRHLDELWSQVIRLRNENNCLIDKLNRVSETQNCV 128
Query: 303 LSHNASLKEK 312
L N+ LKE+
Sbjct: 129 LKENSKLKEE 138
>AT4G34000.1 | chr4:16296008-16297971 FORWARD LENGTH=455
Length = 454
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 180 GISHTALNQNMSMAP-TQTGVVIGGVAPTTNLNIGMDYWGA--AGSSPVPAMHGKASSGS 236
GI + +N N+ A +TGV + V+P + ++ + A A SPVP M G+
Sbjct: 306 GIHNHPMNNNLLQAVDFKTGVTVAAVSPGSQMSPDLTPKSALDASLSPVPYMFGRVRKTG 365
Query: 237 VRGEQWDERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSL-RAELERI 295
E+ ER +QKR NRESA RSR RKQA EL L+ N L + ++E +
Sbjct: 366 AVLEKVIER---RQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIM 422
Query: 296 KKEYEALL 303
+K+ LL
Sbjct: 423 EKQKNQLL 430
>AT1G19490.1 | chr1:6751953-6753959 REVERSE LENGTH=472
Length = 471
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 255 SNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNASLKEKL 313
+NRESAR++ R+QA CEELS +A +L EN +LR E + KE+++L + N LKE++
Sbjct: 167 ANRESARQTIRRRQAMCEELSKKAADLTYENENLRREKDWALKEFQSLETINKHLKEQV 225
>AT3G49760.1 | chr3:18455569-18456039 REVERSE LENGTH=157
Length = 156
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 10/78 (12%)
Query: 243 DERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAEL-------ERI 295
DER K+KRK SNRESA+RSR +KQ EE+S++ + L+ +N L+ +L +R
Sbjct: 70 DER---KKKRKLSNRESAKRSREKKQKHLEEMSIQLNQLKIQNQELKNQLRYVLYHCQRT 126
Query: 296 KKEYEALLSHNASLKEKL 313
K E + LL + L +KL
Sbjct: 127 KMENDRLLMEHRILHDKL 144
>AT1G49720.2 | chr1:18400826-18402362 FORWARD LENGTH=404
Length = 403
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 222 SSPVPAMHGKASSGSVRGEQWDERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNL 281
SSPVP + G+ + E+ ER +QKR NRESA RSR RKQA EL ++L
Sbjct: 290 SSPVPYVFGRGRRSNTGLEKVVER---RQKRMIKNRESAARSRARKQAYTLELEAEIESL 346
Query: 282 RAENSSLRAELERIKKEYEALLSHNASL 309
+ N L+ KK+ E + +HN+ +
Sbjct: 347 KLVNQDLQ------KKQAEIMKTHNSEV 368
>AT1G68880.1 | chr1:25894499-25894915 REVERSE LENGTH=139
Length = 138
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 248 KKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEALLSHNA 307
+K++RK SNRESARRSR+RKQ EEL L +N SL EL + ++ YE ++ N
Sbjct: 47 RKRRRKVSNRESARRSRMRKQRHMEELWSMLVQLINKNKSLVDELSQARECYEKVIEENM 106
Query: 308 SLKE 311
L+E
Sbjct: 107 KLRE 110
>AT2G18160.1 | chr2:7898288-7898803 REVERSE LENGTH=172
Length = 171
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 243 DERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEAL 302
DER K+KR SNRESARRSR+RKQ ++L+ + + L +N + L + Y +
Sbjct: 29 DER---KRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNRQILNSLTVTSQLYMKI 85
Query: 303 LSHNASLKEKLEGNSDSIPYMNE 325
+ N+ L ++E S + +NE
Sbjct: 86 QAENSVLTAQMEELSTRLQSLNE 108
>AT5G24800.1 | chr5:8515259-8516541 FORWARD LENGTH=278
Length = 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 243 DERELKKQKRKQSNRESARRSRLRKQAECEELSVRADNLRAENSSLRAELERIKKEYEAL 302
D +LK+ +R SNRESA+RSR RKQ +L + D+L+ +NS+L +L +++ +
Sbjct: 117 DPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSA 176
Query: 303 LSHNASLKEKLE 314
++N LK +E
Sbjct: 177 GTNNRVLKSDVE 188
>AT5G42910.1 | chr5:17203908-17205211 FORWARD LENGTH=371
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 19/95 (20%)
Query: 223 SPVPAMHGKASS---GSVRGEQWDEREL--KKQKRKQSNRESARRSRLRKQAECEELSVR 277
SP P + ++S G + E E++ KK +RK NRESA RSR RKQA+ E+ V
Sbjct: 265 SPSPYISNGSTSTRGGKINSEITAEKQFVDKKLRRKIKNRESAARSRARKQAQTMEVEV- 323
Query: 278 ADNLRAENSSLRAELERIKKEYEALLSHNASLKEK 312
ELE +KK+YE LL + L+++
Sbjct: 324 -------------ELENLKKDYEELLKQHVELRKR 345
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.305 0.122 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,513,806
Number of extensions: 306531
Number of successful extensions: 1772
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 1765
Number of HSP's successfully gapped: 32
Length of query: 347
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 248
Effective length of database: 8,392,385
Effective search space: 2081311480
Effective search space used: 2081311480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 112 (47.8 bits)