BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0122800 Os02g0122800|AK121372
(279 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358 275 2e-74
AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351 271 3e-73
AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265 243 5e-65
AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251 229 1e-60
AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304 64 9e-11
AT2G43410.2 | chr2:18026397-18030989 REVERSE LENGTH=902 62 4e-10
AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279 61 8e-10
AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291 60 1e-09
AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269 59 3e-09
AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285 58 7e-09
AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408 54 6e-08
AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330 50 1e-06
AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301 49 4e-06
>AT5G52040.2 | chr5:21131081-21133318 FORWARD LENGTH=358
Length = 357
Score = 275 bits (703), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/308 (53%), Positives = 186/308 (60%), Gaps = 38/308 (12%)
Query: 1 MRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEF 60
M+PVFCGN +YDAR+S++ERLF KYG+VERVDMK+GFAFVYMEDERDA++AI LDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 61 GRKGRRLRVEWTKEDXXXXXXXXXXXXXXXTRPT-KTLFVINFDPINTRTRDLERHFDQY 119
GR GRRLRVEWTK D KTLFVINFD NTRTRDLERHF+ Y
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120
Query: 120 GKISNVRIRRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDEKRNGYXXXX 179
GKI NVRIRRNFAF+QYE QEDAT+AL+ TN S LMD+VISVEYA++DDD + NGY
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180
Query: 180 XXXXXXXXXXXXXXXXASPYGRGRERGSPDYGRG-------RERGSPDYGRG-------- 224
ERGSPDYGRG RER SPDYGRG
Sbjct: 181 RRDRSPDRRRRSPSPYRR------ERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYK 234
Query: 225 GDRGSPDYHRG-------ASPQGG---------NKGDERGSPPNNYDRERREASPGYDRP 268
R SPDY R ASP+ G +G+ R PP RE R P R
Sbjct: 235 RARLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRR 294
Query: 269 RSRSPARY 276
SRSP Y
Sbjct: 295 ESRSPPPY 302
>AT4G25500.1 | chr4:13025168-13027243 FORWARD LENGTH=351
Length = 350
Score = 271 bits (692), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/284 (55%), Positives = 184/284 (64%), Gaps = 22/284 (7%)
Query: 1 MRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEF 60
M+PVFCGN +YDAR+ ++ERLF KYG+VERVDMK+GFAFVYMEDERDA++AI LDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 61 GRKGRRLRVEWTKEDX--XXXXXXXXXXXXXXTRPTKTLFVINFDPINTRTRDLERHFDQ 118
GRKGRRLRVEWTK + RP+KTLFVINFD NTRTRDLE+HF+
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120
Query: 119 YGKISNVRIRRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDEKRNGYXXX 178
YGKI NVRIRRNFAF+QYE QEDAT+AL+ +N S LMD+VISVEYA++DDD + NG+
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180
Query: 179 XXXXXXXXXXXXXXXXXASPYGRGRERGSPDYGRGRERGSPDYGRGGDRGSPDYHRGASP 238
RERGSPDYGRG SP +R SPDY R SP
Sbjct: 181 RRRDRSPERRRRSPSPYK------RERGSPDYGRG---ASPVAAYRKERTSPDYGRRRSP 231
Query: 239 QGGNKGDERGSPPNNYDRERREASPGYDRPRSR----SPARYER 278
K RGSP Y R+RR G D PR R SP +Y R
Sbjct: 232 SPYKKS-RRGSP--EYGRDRR----GNDSPRRRERVASPTKYSR 268
>AT3G61860.1 | chr3:22900311-22902159 REVERSE LENGTH=265
Length = 264
Score = 243 bits (621), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/286 (52%), Positives = 181/286 (63%), Gaps = 39/286 (13%)
Query: 1 MRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEF 60
MRPVF GN +Y+ RQS++ERLF KYGRV+RVDMKSG+AFVY EDERDA++AI +LD F
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 61 GRKGRRLRVEWTKEDXXXXXXXXXXXXXXXTRPTKTLFVINFDPINTRTRDLERHFDQYG 120
G + RRL VEW K + +PTKTLFVINFDPI T+ D+E+HF+ YG
Sbjct: 61 GYEKRRLSVEWAKGERGRPRGDAKAPSN--LKPTKTLFVINFDPIRTKEHDIEKHFEPYG 118
Query: 121 KISNVRIRRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDEK--RNGYXXX 178
K++NVRIRRNF+FVQ+E QEDATKALE T S ++DRV+SVEYAL+DDDE+ RNG
Sbjct: 119 KVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNG---- 174
Query: 179 XXXXXXXXXXXXXXXXXASPYGRGRERGSPDYGRGRERGSPDYGRGGDRGSPDYHRGASP 238
SP R R SPDYGR R SP GR R SPDY R SP
Sbjct: 175 ----------GRSPRRSLSPV--YRRRPSPDYGR---RPSPGQGR---RPSPDYGRARSP 216
Query: 239 Q-----GGNKGDERGSP-----PNNYDRERREASPGYDRPRSRSPA 274
+ G + R SP ++Y R+R SPGYDR RSRSP
Sbjct: 217 EYDRYKGPAAYERRRSPDYGRRSSDYGRQR---SPGYDRYRSRSPV 259
>AT2G46610.1 | chr2:19136769-19138492 REVERSE LENGTH=251
Length = 250
Score = 229 bits (583), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/270 (50%), Positives = 163/270 (60%), Gaps = 27/270 (10%)
Query: 1 MRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEF 60
MR V+ GN DYD R S++ERLFSK+GRV+RVDMKSG+AFVY EDERDA++AI R D F
Sbjct: 1 MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60
Query: 61 GRKGRRLRVEWTKEDXXXXXXXXXXXXXXXTRPTKTLFVINFDPINTRTRDLERHFDQYG 120
G R+L VEW K+ RPTKTLFVINFDPI TR RD+ERHF+ YG
Sbjct: 61 GYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYG 120
Query: 121 KISNVRIRRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDEKRNGYXXXXX 180
K+ NVR+RRNFAFVQ+ QEDATKAL+ T+ S L+D+V+SVEYALR+ E+ + Y
Sbjct: 121 KVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSRR 180
Query: 181 XXXXXXXXXXXXXXXASPYGRGRERGSPDYGRGRERGSPDYGRGGDRGSPDYHRGASPQG 240
SP R R SPDY R R SP+Y R +G Y R SP
Sbjct: 181 RR--------------SPSPVYRRRPSPDYTR---RRSPEYDRY--KGPAPYERRKSPDY 221
Query: 241 GNKGDERGSPPNNYDRERREASPGYDRPRS 270
G + + G R SPGYDR RS
Sbjct: 222 GRRSSDYGRA--------RARSPGYDRSRS 243
>AT1G02840.1 | chr1:626918-629583 FORWARD LENGTH=304
Length = 303
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 2 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMK-----SGFAFVYMEDERDADEAIHRLD 56
R V+ GNL D R+ E+E LFSKYG V ++D+K G+AFV +D RDA++AIH D
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66
Query: 57 RIEFGRKGRRLRVEWT 72
+F G RLRVE
Sbjct: 67 GYDF--DGHRLRVELA 80
>AT2G43410.2 | chr2:18026397-18030989 REVERSE LENGTH=902
Length = 901
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 27/177 (15%)
Query: 4 VFCGNLDYDARQSEIERLFSKYGRVERVDMKS--GFAFVYMEDERDADEAIHRLDRIEFG 61
++ G+L + +S++ LF +YG ++R+ + S GFAF+Y R +EA+ + ++
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYY---RHVEEAVAAKEALQGA 76
Query: 62 R-KGRRLRVEWTKEDXXXXXXXXXXXXXXXTRPTKTLFVINFDPINTRTRDLERHFDQYG 120
G ++++E+ + +P K+L+V P N DLE F ++G
Sbjct: 77 NLNGSQIKIEYARP----------------AKPCKSLWVGGIGP-NVSKDDLEEEFSKFG 119
Query: 121 KISNVRI--RRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDEKRNGY 175
KI + R R AF+ Y +DA +A + NG + + V++ LR K+ +
Sbjct: 120 KIEDFRFLRERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVDF-LRSQAPKKEQW 174
>AT4G02430.2 | chr4:1069186-1071313 FORWARD LENGTH=279
Length = 278
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Query: 2 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMK-----SGFAFVYMEDERDADEAIHRLD 56
R ++ GNL D R+ E+E LFSKYG V ++D+K G+AFV ED RDAD+AI+ D
Sbjct: 7 RTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRD 66
Query: 57 RIEFGRKGRRLRVE 70
+F G LRVE
Sbjct: 67 GYDF--DGHHLRVE 78
>AT2G37340.1 | chr2:15670372-15672331 REVERSE LENGTH=291
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 4 VFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEFGRK 63
++ G L R ++ERLFS+YGRV VDMK +AFV D RDAD+A H LD +F
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDF--D 70
Query: 64 GRRLRVEWTK 73
G R+ VE+++
Sbjct: 71 GSRITVEFSR 80
>AT1G09140.1 | chr1:2942887-2945818 REVERSE LENGTH=269
Length = 268
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 2 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMK-----SGFAFVYMEDERDADEAIHRLD 56
R ++ GNL D R+ E+E LF KYG + +D+K G+AFV ED RDAD+AI+ D
Sbjct: 7 RTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRD 66
Query: 57 RIEFGRKGRRLRVE 70
+F G RLRVE
Sbjct: 67 GYDF--DGCRLRVE 78
>AT3G53500.2 | chr3:19834557-19836507 REVERSE LENGTH=285
Length = 284
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 4 VFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEFGRK 63
++ G L R ++ERLFS+YGRV VDMK +AFV D RDAD+A + LD +F
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDF--D 70
Query: 64 GRRLRVEWTK 73
G R+ VE ++
Sbjct: 71 GSRITVEASR 80
>AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408
Length = 407
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 4 VFCGNLDYDARQSEIERLFSKYGRV-ERVDMKSG------FAFVYMEDERDADEAIHRLD 56
V+ NL A ++++RLF ++G + V MK G F FV E A AI +++
Sbjct: 121 VYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMN 180
Query: 57 RIEFGRK----GRRLRVEWTKEDXXXXXXXXXXXXXXXTRPTKTLFVINFDPINTRTRDL 112
+ K GR R ED TR L+V N D T+ L
Sbjct: 181 GVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTK-L 239
Query: 113 ERHFDQYGKISNVR-------IRRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYAL 165
E F ++G I++ + I + FV++ E+A+KA+ NG + ++ I V A
Sbjct: 240 EELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQ 299
Query: 166 RDDDEK 171
+ K
Sbjct: 300 CKEQHK 305
>AT4G24770.1 | chr4:12766223-12767952 REVERSE LENGTH=330
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 68/177 (38%), Gaps = 24/177 (13%)
Query: 4 VFCGNLDYDARQSEIERLFSKYGRVE--------RVDMKSGFAFVYMEDERDADEAIHRL 55
+F GNL YD + LF + G VE D GF FV M +A+ A+ +
Sbjct: 152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211
Query: 56 DRIEFGRKGRRLRVEWTKEDXXXXXXXXXXXXXXXTRPTKTLFVINFDPINTRTRDLERH 115
+R + GR L V + P ++V N P + LE+
Sbjct: 212 NRYDL--NGRLLTV-----NKAAPRGSRPERAPRVYEPAFRVYVGNL-PWDVDNGRLEQL 263
Query: 116 FDQYGKISNVRI--------RRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYA 164
F ++GK+ R+ R F FV ++ +A+ +G L R I V A
Sbjct: 264 FSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
>AT3G49430.1 | chr3:18332668-18334829 FORWARD LENGTH=301
Length = 300
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 2 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS-----GFAFVYMEDERDADEAIHRLD 56
R ++ GNL D R+ EIE +F KYGR+ +++K + FV E RDA++AI D
Sbjct: 7 RSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRD 66
Query: 57 RIEFGRKGRRLRVE 70
+ G RLRVE
Sbjct: 67 --GYNLDGCRLRVE 78
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,196,649
Number of extensions: 272407
Number of successful extensions: 1440
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 1450
Number of HSP's successfully gapped: 14
Length of query: 279
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 182
Effective length of database: 8,447,217
Effective search space: 1537393494
Effective search space used: 1537393494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)