BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0111900 Os02g0111900|AK119353
(927 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08110.1 | chr5:2594854-2600114 REVERSE LENGTH=1142 845 0.0
AT4G35740.1 | chr4:16936233-16940172 FORWARD LENGTH=714 59 1e-08
AT1G27880.1 | chr1:9708940-9713901 FORWARD LENGTH=912 56 7e-08
AT1G77030.1 | chr1:28947887-28951526 REVERSE LENGTH=846 54 4e-07
>AT5G08110.1 | chr5:2594854-2600114 REVERSE LENGTH=1142
Length = 1141
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/835 (51%), Positives = 556/835 (66%), Gaps = 34/835 (4%)
Query: 105 DGGGEDIYAKK---PTNPAPPRPLSCHGTQPLDPTQMVEHLRQGLGKAGQITHVEEIPGR 161
DGG E A K PT+ + CH T L P++MVEHLR G+G GQ+ HVE I R
Sbjct: 308 DGGNEARQAGKGTCPTSGSRKFQTLCHATNSLLPSEMVEHLRNGIGSKGQVVHVEVIKAR 367
Query: 162 EATFAELPGHLSSSMRDALRSIGVTKLYAHXXXXXXXXXXXXXXXXXXXXXXXXXLCYNI 221
++ + E+ LS + + AL+ IG+ LY+H LCYN+
Sbjct: 368 KSAYVEMSDKLSETTKSALKRIGLNTLYSHQAEAISAALAGKNVAVATMTSSGKSLCYNV 427
Query: 222 PVLESISQSSAPCALYIFPTKALAQDQLKTLLEMKPAFRSDFDVSIYDGDTAMKDRTRIR 281
PV E + + + CALY+FPTKALAQDQL+ L ++ F + ++ +YDGDT KDRTR+R
Sbjct: 428 PVFEELCKDTNSCALYLFPTKALAQDQLRALSDLIKGFEASINMGVYDGDTPYKDRTRLR 487
Query: 282 NTARLLITNPDMLHMSILPCHA-QFKRVLFNLKYIVIDEAHSYKGAFGCHAALILRRLKR 340
+ ARLLITNPDMLH+SIL H QF R+L NL+YIVIDEAH YKG FGCH ALILRRL+R
Sbjct: 488 SNARLLITNPDMLHISILRRHKEQFSRILSNLRYIVIDEAHIYKGPFGCHMALILRRLRR 547
Query: 341 ICSYVYGSNPTFIFCTATLANPREHVMELANLDRVVLVDNDTSPCGSKNFLLWNP---PL 397
+CS+VYG NP+FIFCTAT ANPREH MELANL + LV D SP K F+LWNP P
Sbjct: 548 LCSHVYGVNPSFIFCTATSANPREHCMELANLSELELVTIDGSPSSEKLFVLWNPSAPPT 607
Query: 398 QL-------------------AKAEDRRPNPVLEVSYLFAEMVQHGLRAIAFCKTRKMCE 438
A D P EVS+LFAEMVQHGLR IAFC +RK+CE
Sbjct: 608 SKSEKSSKVVSSSEAAADKPSGAAVDTLSGPASEVSHLFAEMVQHGLRCIAFCPSRKLCE 667
Query: 439 QVLMQTRQILKETAAELVNSICVYRGGYVASDRRKIEADLFGGILRGVAATNALELGIDV 498
VL TR+IL ETA LV +I YRGGY+A DRRKIE+DLFGG L G+AATNALELGIDV
Sbjct: 668 LVLCLTREILAETAPHLVEAITSYRGGYIAEDRRKIESDLFGGKLCGIAATNALELGIDV 727
Query: 499 GHIDATLHLGFPGSMASFWQQAGRSGRRAKQSIAVYVAFEGALDQYFMRSPHKLFGKPIE 558
GHID TLHLGFPGS+AS WQQAGRSGRR K S+AVYVAF G LDQY+M P KLFG PIE
Sbjct: 728 GHIDVTLHLGFPGSIASLWQQAGRSGRRQKPSLAVYVAFLGPLDQYYMSFPDKLFGSPIE 787
Query: 559 HCQVDSQNRKVLEQHLACAASEYPLRQEHDESYFGFSMNSVLMTLKDKGCLMNNPS-GGD 617
C +DSQN+ VL QHLACAA E+PL ++D+ +FG ++ L L++KG L +PS
Sbjct: 788 CCHIDSQNKHVLMQHLACAALEHPLSLQYDQQHFGSGLSDPLAELRNKGFLSFDPSRDSS 847
Query: 618 SGVWKYIGPDKKPSHSVSIRAIEHHRYKVIDRRSNRVLEEIEESKAFFQVYDGAVYMHQG 677
S +W YIG +K P+ VSIRAIE RY+V++++S VL+EIEESKAFF VY+GA+YM+QG
Sbjct: 848 SRIWNYIGREKNPARIVSIRAIETVRYRVMEKKSKDVLDEIEESKAFFHVYEGAIYMNQG 907
Query: 678 VSYLVDKLDLTSRIAYCKVFDLNYYTKVQDYTEISFIGGDVDEHPASECKPDIRRTTAQA 737
+YLV LD+ ++A C++ +++YYT+ +DYT+I GGD + KP T Q
Sbjct: 908 RNYLVTSLDIKEKVALCELVNVDYYTRTRDYTDIKVTGGDTAYPVKAPKKP-----TPQT 962
Query: 738 NDCRVTTKWVGFDRILKSNNQKSDSINLDHLPPYSFETQAVWVQIPVSVRTTMEQMEYQL 797
+ CRVTTKW GF RI + NN+ D + L LP Y++++QAVW+Q+P+SV+ +E
Sbjct: 963 HACRVTTKWFGFLRIRRRNNEVIDDVELS-LPSYTYQSQAVWIQVPMSVKLAVETANLPF 1021
Query: 798 CGGVHAASHALLSIIPLHMMCSGSDLGTQCAEPQENSETADRILLYDKHPGGIGLASQAK 857
G+HAA HAL++++P + C+ SD+ +C PQE RIL+YD+HPGG G++++
Sbjct: 1022 RAGLHAACHALVNVVPTRVTCNYSDIAPECPNPQEQRYFPARILVYDRHPGGTGISAKIC 1081
Query: 858 LLFGELLVAALELVSSCS-CTNSDGCPNCIQSFACSDYNRDLDKEASIFLLKGVI 911
LF ELL A +L+ SC C GCP C Q+F C YN L K+A+I +++GV+
Sbjct: 1082 PLFFELLKDARDLLRSCEKCPPETGCPKCAQTFGCRGYNELLHKKAAIMIMQGVL 1136
>AT4G35740.1 | chr4:16936233-16940172 FORWARD LENGTH=714
Length = 713
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 79/401 (19%)
Query: 217 LCYNIPVLESISQSSAPCALYIFPTKALAQDQLKTLLE--MKPAFRSDFDVSIYDGDTAM 274
+CY IP L + L + P AL ++Q+ L E + + S + + +
Sbjct: 66 ICYQIPAL-----AKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQAT-HVKNKIH 119
Query: 275 KDRTRIRNTARLLITNPDMLHMS--ILPCHAQFKRVLFNLKYIVIDEAHSYKGAFGCHAA 332
+D + + RLL P+++ +L R L NL I IDEAH
Sbjct: 120 EDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNL--IAIDEAHC---------- 167
Query: 333 LILRRLKRICSYVYGSNPTFIFCTATLANPREHVMELANLDRVVLVDNDTSPCGSKNFL- 391
I S+ + P++ L+ R+ + ++ V+ + +P K+ +
Sbjct: 168 --------ISSWGHDFRPSY----RQLSTLRDSLADVP----VLALTATAAPKVQKDVID 211
Query: 392 ---LWNPPLQLAKAEDRRPNPVLEVSYL---------FAEMVQH--GLRAIAFCKTRKMC 437
L NP + K+ RPN EV Y +++ + AI +C R C
Sbjct: 212 SLNLRNP--LVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTC 269
Query: 438 EQVLMQTRQILKETAAELVNSICVYRGGYVASDRRKIEADLFGGILRGVAATNALELGID 497
+ + + I +AA Y G + R + D + + AT A +GID
Sbjct: 270 DDLSVHLSSIGISSAA--------YHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGID 321
Query: 498 VGHIDATLHLGFPGSMASFWQQAGRSGRRA--KQSIAVYVAFEGALDQYFMRS------- 548
+ H P SM SF+Q++GR+GR +S+ Y + +Y +R+
Sbjct: 322 KKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSS 381
Query: 549 ----PHKLFGKPIEHCQVDSQNRKVLEQHLACAASEYPLRQ 585
P F + + +C+ RK + L E+P++Q
Sbjct: 382 SSKKPTSDFEQIVTYCEGSGCRRKKI---LESFGEEFPVQQ 419
>AT1G27880.1 | chr1:9708940-9713901 FORWARD LENGTH=912
Length = 911
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 462 YRGGYVASDRRKIEADLFGGILRGVAATNALELGIDVGHIDATLHLGFPGSMASFWQQAG 521
Y G A DR +I+ +R V AT A +G+D G + A +H PGSM + Q+ G
Sbjct: 516 YHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIG 575
Query: 522 RSGRRAKQS 530
R+GR + S
Sbjct: 576 RAGRDGRLS 584
>AT1G77030.1 | chr1:28947887-28951526 REVERSE LENGTH=846
Length = 845
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 144/370 (38%), Gaps = 56/370 (15%)
Query: 218 CYNIPVLESISQ---SSAPCALYIFPTKALAQDQLKTLLEMKPAFRSDFDVSIYDGDTAM 274
+ IP+LE + Q AL + PT+ LA+ LK E+ +D VS+ G +M
Sbjct: 81 AFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKF--TDLRVSLLVGGDSM 138
Query: 275 KDR-TRIRNTARLLITNPDMLHMSILPCHAQFKRVLFNLKYIVIDEAHSYKG-AFGCHAA 332
+D+ + ++I P L M +L L ++Y+V DEA S G F
Sbjct: 139 EDQFEELTKGPDVIIATPGRL-MHLLSEVDDM--TLRTVEYVVFDEADSLFGMGFAEQLH 195
Query: 333 LILRRL--KRICSYVYGSNPTFI--FCTATLANPREHVMELANLDRVVLVDNDTSPCGSK 388
IL +L R + P+ + F A L P +L LD V+N SP
Sbjct: 196 QILTQLSENRQTLLFSATLPSALAEFAKAGLREP-----QLVRLD----VENKISPDLKL 246
Query: 389 NFLLWNPPLQLAKAEDRRPNPVLEVSYLFAEMVQHGLRAIAFCKTRKMCEQVLMQTRQIL 448
+FL P + + + YL E + + + F T+ E V +
Sbjct: 247 SFLTVRPEEKYSA-----------LLYLVREHISSDQQTLIFVSTKHHVEFV----NSLF 291
Query: 449 KETAAELVNSICVYRGGYVASDRRKIEADLFGG------ILRGVAATNALELGIDVGHID 502
K E S+C G + D RKI F I+ +AA GID+ +D
Sbjct: 292 KLENIE--PSVCY---GDMDQDARKIHVSRFRARKTMLLIVTDIAAR-----GIDIPLLD 341
Query: 503 ATLHLGFPGSMASFWQQAGRSGRRAKQSIAVYVAFEGALDQYFMRSPHKLFGKPIEHCQV 562
++ FP F + GR+ R + A +F D +M H KP+
Sbjct: 342 NVINWDFPPRPKIFVHRVGRAARAGRTGCA--YSFVTPEDMPYMLDLHLFLSKPVRPAPT 399
Query: 563 DSQNRKVLEQ 572
+ + K +E+
Sbjct: 400 EDEVLKNMEE 409
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,330,997
Number of extensions: 799595
Number of successful extensions: 1807
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1806
Number of HSP's successfully gapped: 4
Length of query: 927
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 819
Effective length of database: 8,145,641
Effective search space: 6671279979
Effective search space used: 6671279979
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)