BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0110200 Os02g0110200|AK105694
         (487 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15440.1  | chr4:8835869-8838462 FORWARD LENGTH=385            367   e-102
AT5G42650.1  | chr5:17097803-17099359 REVERSE LENGTH=519          275   4e-74

>AT4G15440.1 | chr4:8835869-8838462 FORWARD LENGTH=385
          Length = 384

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 181/389 (46%), Positives = 242/389 (62%), Gaps = 9/389 (2%)

Query: 93  LVDKRDVLIGPYVPSLAFTRGTRVGVYLDTQDPDHARTKAFSIDXXXXXXXXXXXXXXXX 152
           LVDKRDVLIG + PSL F  G RVGVYLDT +P HA+ K F+++                
Sbjct: 3   LVDKRDVLIGDFRPSLGFYGGVRVGVYLDTTEPKHAKIKGFAMETLKRSSKVWLQELRSN 62

Query: 153 VDDMLAAVEEDLNRAPDPAAASASYLIPLQKCIFRFLCKALVGADPAADGLVDRFGVYIL 212
           ++     +E ++++       +ASY+ PLQ+CIF FLC +L G D +    +   G   +
Sbjct: 63  LNIFWGTIESEISKN-----GAASYIFPLQRCIFSFLCASLAGVDASVSPDIAENGWKTI 117

Query: 213 DVWLALQLVPTQKVGVIPQPLEELLLHSFPLPSFVVKPGYDLLYRFVEKHGAAAVSIAEK 272
           + WLALQ++PT K+GV+PQPLEE+LLH++P PS ++   Y  LY F++++    + + ++
Sbjct: 118 NTWLALQVIPTAKLGVVPQPLEEILLHTWPYPSLLIAGNYKKLYNFIDENAGDCLRLGQE 177

Query: 273 EHGISKEEAINNILFVLGFNAFGGFSVFLPFLVMEVGKPXXXXXXXXXXXXXXXXXXXXX 332
           E G++++EAI N+LFVLGFNA+GGFSVFLP L+   G+                      
Sbjct: 178 EFGLTRDEAIQNLLFVLGFNAYGGFSVFLPSLI---GRITGDNSGLQERIRTEVRRVCGS 234

Query: 333 XXXXXXXXXREMALVRSTVYEVLRMQPPVPLQFGRARRDFVLRSHGGAAYEVGKGELLCG 392
                     EM LV+S VYE LR  PPVPLQF RAR+DF + SH  A +EV KGELLCG
Sbjct: 235 GSDLNFKTVNEMELVKSVVYETLRFSPPVPLQFARARKDFQISSHD-AVFEVKKGELLCG 293

Query: 393 YQPLAMRDPAVFDRPEEFVPERFLGDDGEALLQYVYWSNGPETGEPSPGNKQCAAKEVVV 452
           YQPL MRD  VFD PEEF P+R++G+ G  LL Y+YWSNGP+TG PS  NKQCAAK++V 
Sbjct: 294 YQPLVMRDANVFDEPEEFKPDRYVGETGSELLNYLYWSNGPQTGTPSASNKQCAAKDIVT 353

Query: 453 ATACMLVAELFRRYDDFECDGTSFTKLDK 481
            TA +LVA+LF RYD    D  S   + K
Sbjct: 354 LTASLLVADLFLRYDTITGDSGSIKAVVK 382



>AT5G42650.1 | chr5:17097803-17099359 REVERSE LENGTH=519
          Length = 518

 Score =  275 bits (703), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 162/441 (36%), Positives = 234/441 (53%), Gaps = 16/441 (3%)

Query: 37  FWFQGPDDFFRRRAADHKSTVFRANIPPTFPFFLGVDPRXXXXXXXXXFTALFDPALVDK 96
           F+ QG ++FF+ R   + STV+R N+PP    F+  +P+         F  LFD   V+K
Sbjct: 76  FYDQGAEEFFKSRIRKYNSTVYRVNMPPGA--FIAENPQVVALLDGKSFPVLFDVDKVEK 133

Query: 97  RDVLIGPYVPSLAFTRGTRVGVYLDTQDPDHARTKAFSIDXXXXXXXXXXXXXXXXVDDM 156
           +D+  G Y+PS   T G R+  YLD  +P H + K                       ++
Sbjct: 134 KDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSEL 193

Query: 157 LAAVEEDLNRAPDPAAASASYLIPLQKCIFRFLCKALVGADPAADGL-VDRFGVYILDVW 215
             ++E++L+         A +        F FL +A  G +PA   L  D  G  ++  W
Sbjct: 194 FDSLEKELS-----LKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPG--LITKW 246

Query: 216 LALQLVPTQKVGVIPQPLEELLLHSFPLPSFVVKPGYDLLYRFVEKHGAAAVSIAEKEHG 275
           +   L P   +G +P+ +EE L+H+F LP  +VK  Y  LY F  +  A  + +   + G
Sbjct: 247 VLFNLHPLLSIG-LPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLE-SAGEILVEADKLG 304

Query: 276 ISKEEAINNILFVLGFNAFGGFSVFLPFLVMEVGKPXXXXXXXXXXXXXXXXXXXXXXXX 335
           IS+EEA +N+LF   FN +GG  +  P +V  +G+                         
Sbjct: 305 ISREEATHNLLFATCFNTWGGMKILFPNMVKRIGR--AGHQVHNRLAEEIRSVIKSNGGE 362

Query: 336 XXXXXXREMALVRSTVYEVLRMQPPVPLQFGRARRDFVLRSHGGAAYEVGKGELLCGYQP 395
                  +M L +S VYE LR +PPV  Q+GRA++D V+ SH  AA++V  GE+L GYQP
Sbjct: 363 LTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESH-DAAFKVKAGEMLYGYQP 421

Query: 396 LAMRDPAVFDRPEEFVPERFLGDDGEALLQYVYWSNGPETGEPSPGNKQCAAKEVVVATA 455
           LA RDP +FDR +EFVPERF+G++GE LL++V WSNGPET  P+ GNKQCA K+ VV  A
Sbjct: 422 LATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVA 481

Query: 456 CMLVAELFRRYDDFECD-GTS 475
            + V E+FRRYD F+ + GTS
Sbjct: 482 RLFVIEIFRRYDSFDIEVGTS 502



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.142    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,208,073
Number of extensions: 371697
Number of successful extensions: 821
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 854
Number of HSP's successfully gapped: 2
Length of query: 487
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 385
Effective length of database: 8,310,137
Effective search space: 3199402745
Effective search space used: 3199402745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)