BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0109800 Os02g0109800|AK069014
(599 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10840.1 | chr4:6656614-6659033 FORWARD LENGTH=610 647 0.0
AT1G27500.1 | chr1:9551629-9553654 REVERSE LENGTH=651 538 e-153
AT3G27960.1 | chr3:10380513-10382593 REVERSE LENGTH=664 524 e-149
AT2G31240.1 | chr2:13317570-13319518 REVERSE LENGTH=618 131 1e-30
>AT4G10840.1 | chr4:6656614-6659033 FORWARD LENGTH=610
Length = 609
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/563 (58%), Positives = 401/563 (71%), Gaps = 33/563 (5%)
Query: 47 VAAQPETDEAALDNPDLGPFLLKQARDAMVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 106
AA + D+ +LDNPDLGPFLLK ARDA+ S
Sbjct: 68 TAAVIDVDDPSLDNPDLGPFLLKLARDAIASGEGPNKALDYAIRATKSFERCCAAVAPPI 127
Query: 107 X----------XXMSLHVAAAIHCGLGRHADAIPVLERAVAVVTXXXXXXXXXXXXXXXX 156
MSLHV AAI+C LGR +A+P LERA+ V
Sbjct: 128 PGGSDGGPVLDLAMSLHVLAAIYCSLGRFDEAVPPLERAIQV------------------ 169
Query: 157 XXXXDQQKGEEWALAAFSGWMQLGDTHAMLGRMDESIACYGKGLEIQMAALGERDPRVAE 216
D +G + +LAAFSG MQLGDT +MLG++D SIACY +GL+IQ+ LG+ DPRV E
Sbjct: 170 ---PDPTRGPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKIQIQTLGDTDPRVGE 226
Query: 217 TCRYLAEAHVQALQFDEAEKLCRKALEIHREHSAPASLEEASDRRLMALILDAKGDYDGA 276
TCRYLAEA+VQA+QF++AE+LC+K LEIHR HS PASLEEA+DRRLMA+I +AKGDY+ A
Sbjct: 227 TCRYLAEAYVQAMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRLMAIICEAKGDYENA 286
Query: 277 LEHLVLASMTMVANGRDIEVATIDVAIGNTYLALARFDEAVFSYQKALTVLKSARGDDHP 336
LEHLVLASM M+A+G++ EVA+IDV+IGN Y++L RFDEAVFSYQKALTV K+++G+ HP
Sbjct: 287 LEHLVLASMAMIASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQKALTVFKASKGETHP 346
Query: 337 SVASVFVRLADLYHRTGRLRESKSYCENALRVYAKPAPGAAPDEVAGGLMEIAAIYEALG 396
+VASVFVRLA+LYHRTG+LRESKSYCENALR+Y KP PG +E+AGGL EI+AIYE++
Sbjct: 347 TVASVFVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIAGGLTEISAIYESVD 406
Query: 397 DLDEXXXXXXXXXXXXEDSPGQWSTVAGIEAQMGVLYYMVGRYADSRNSFENAVAKLRAS 456
+ +E ED PGQ S +AG+EA+MGV+YY VGRY D+RN+FE+AV KLRA+
Sbjct: 407 EPEEALKLLQKSMKLLEDKPGQQSAIAGLEARMGVMYYTVGRYEDARNAFESAVTKLRAA 466
Query: 457 GERKSAFFGVLLNQMGLACVQLFKIDEAAQLFEEARAVLEQECGASHPDTLGVYSNLAAI 516
GE KSAFFGV+LNQMGLACVQLFKIDEA +LFEEAR +LEQE G DTLGVYSNLAA
Sbjct: 467 GE-KSAFFGVVLNQMGLACVQLFKIDEAGELFEEARGILEQERGPCDQDTLGVYSNLAAT 525
Query: 517 YDAMGRVEDAIEILEHVLKVREEKLGTANPDVXXXXXXXXXXXXXXGRSRNRKQKSLENL 576
YDAMGR+EDAIEILE VLK+REEKLGTANPD GRSRN K KSL+NL
Sbjct: 526 YDAMGRIEDAIEILEQVLKLREEKLGTANPDFEDEKKRLAELLKEAGRSRNYKAKSLQNL 585
Query: 577 FVTNSQRVKKD-AGRRWSNFGFR 598
N++ KK+ + ++W + GF+
Sbjct: 586 IDPNARPPKKESSAKKWPSLGFK 608
>AT1G27500.1 | chr1:9551629-9553654 REVERSE LENGTH=651
Length = 650
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/528 (50%), Positives = 357/528 (67%), Gaps = 21/528 (3%)
Query: 50 QPETDEAALDNPDLGPFLLKQARDAMVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 109
Q +E + +N +L FLL QAR+ + S
Sbjct: 133 QNGNEEPSSENVELARFLLNQARNLVSSGDSTHKALELTHRAAKLFEASAENGKPCLEWI 192
Query: 110 MSLHVAAAIHCGLGRHADAIPVLERAVAVVTXXXXXXXXXXXXXXXXXXXXDQQKGEEWA 169
M LHV AA+HC L + +AIPVL+R+V + ++GEE A
Sbjct: 193 MCLHVTAAVHCKLKEYNEAIPVLQRSVEIPVV---------------------EEGEEHA 231
Query: 170 LAAFSGWMQLGDTHAMLGRMDESIACYGKGLEIQMAALGERDPRVAETCRYLAEAHVQAL 229
LA F+G MQLGDT+AM+G+++ SI+CY +GL IQ LGE DPRV ETCRYLAEA VQAL
Sbjct: 232 LAKFAGLMQLGDTYAMVGQLESSISCYTEGLNIQKKVLGENDPRVGETCRYLAEALVQAL 291
Query: 230 QFDEAEKLCRKALEIHREHSAPASLEEASDRRLMALILDAKGDYDGALEHLVLASMTMVA 289
+FDEA+++C AL IHRE P S+ EA+DRRLM LI + KGD++ ALEHLVLASM M A
Sbjct: 292 RFDEAQQVCETALSIHRESGLPGSIAEAADRRLMGLICETKGDHENALEHLVLASMAMAA 351
Query: 290 NGRDIEVATIDVAIGNTYLALARFDEAVFSYQKALTVLKSARGDDHPSVASVFVRLADLY 349
NG++ EVA +D +IG++YL+L+RFDEA+ +YQK+LT LK+A+G++HP+V SV++RLADLY
Sbjct: 352 NGQESEVAFVDTSIGDSYLSLSRFDEAICAYQKSLTALKTAKGENHPAVGSVYIRLADLY 411
Query: 350 HRTGRLRESKSYCENALRVYAKPAPGAAPDEVAGGLMEIAAIYEALGDLDEXXXXXXXXX 409
+RTG++RE+KSYCENALR+Y +P+E+A GL +I+ I E++ ++++
Sbjct: 412 NRTGKVREAKSYCENALRIYESHNLEISPEEIASGLTDISVICESMNEVEQAITLLQKAL 471
Query: 410 XXXEDSPGQWSTVAGIEAQMGVLYYMVGRYADSRNSFENAVAKLRASGERKSAFFGVLLN 469
DSPGQ +AGIEAQMGVLYYM+G+Y +S N+F++A++KLRA+G+++S FFG+ LN
Sbjct: 472 KIYADSPGQKIMIAGIEAQMGVLYYMMGKYMESYNTFKSAISKLRATGKKQSTFFGIALN 531
Query: 470 QMGLACVQLFKIDEAAQLFEEARAVLEQECGASHPDTLGVYSNLAAIYDAMGRVEDAIEI 529
QMGLAC+QL I+EA +LFEEA+ +LEQECG HP+TLG+YSNLA YDA+GR++DAI++
Sbjct: 532 QMGLACIQLDAIEEAVELFEEAKCILEQECGPYHPETLGLYSNLAGAYDAIGRLDDAIKL 591
Query: 530 LEHVLKVREEKLGTANPDVXXXXXXXXXXXXXXGRSRNRKQKSLENLF 577
L HV+ VREEKLGTANP G RK KSL+ L
Sbjct: 592 LGHVVGVREEKLGTANPVTEDEKRRLAQLLKEAGNVTGRKAKSLKTLI 639
>AT3G27960.1 | chr3:10380513-10382593 REVERSE LENGTH=664
Length = 663
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/537 (49%), Positives = 359/537 (66%), Gaps = 26/537 (4%)
Query: 51 PETDEAALD--NPDLGPFLLKQARDAMVSXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXX 107
P+ + ++D +P+LG LLKQAR+ + S
Sbjct: 139 PDLGKVSVDEESPELGVVLLKQARELVSSGENLNKALDLALRAVKVFEKCGEGEKQLGLN 198
Query: 108 XXMSLHVAAAIHCGLGRHADAIPVLERAVAVVTXXXXXXXXXXXXXXXXXXXXDQQKGEE 167
MSLH+ AAI+ GLGR+ DA+PVLER++ + + GE+
Sbjct: 199 LVMSLHILAAIYAGLGRYNDAVPVLERSIEIPMI---------------------EDGED 237
Query: 168 WALAAFSGWMQLGDTHAMLGRMDESIACYGKGLEIQMAALGERDPRVAETCRYLAEAHVQ 227
ALA F+G MQLGD + ++G+++ SI Y GLEIQ LGE D RV ETCRYLAEAHVQ
Sbjct: 238 HALAKFAGCMQLGDMYGLMGQVENSIMLYTAGLEIQRQVLGESDARVGETCRYLAEAHVQ 297
Query: 228 ALQFDEAEKLCRKALEIHREH--SAPASLEEASDRRLMALILDAKGDYDGALEHLVLASM 285
A+QF+EA +LC+ AL+IH+E+ +A AS+EEA+DR+LM LI DAKGDY+ ALEH VLASM
Sbjct: 298 AMQFEEASRLCQMALDIHKENGAAATASIEEAADRKLMGLICDAKGDYEVALEHYVLASM 357
Query: 286 TMVANGRDIEVATIDVAIGNTYLALARFDEAVFSYQKALTVLKSARGDDHPSVASVFVRL 345
M + +VA +D +IG+ Y++LARFDEA+F+YQKAL V K +G+ H SVA V+VRL
Sbjct: 358 AMSSQNHREDVAAVDCSIGDAYMSLARFDEAIFAYQKALAVFKQGKGETHSSVALVYVRL 417
Query: 346 ADLYHRTGRLRESKSYCENALRVYAKPAPGAAPDEVAGGLMEIAAIYEALGDLDEXXXXX 405
ADLY++ G+ R+SKSYCENAL++Y KP PG +EVA G +EI+AIY+++ +LD+
Sbjct: 418 ADLYNKIGKTRDSKSYCENALKIYLKPTPGTPMEEVATGFIEISAIYQSMNELDQALKLL 477
Query: 406 XXXXXXXEDSPGQWSTVAGIEAQMGVLYYMVGRYADSRNSFENAVAKLRASGERKSAFFG 465
++PGQ +T+AGIEAQMGV+ YM+G Y++S + F++A++K R SGE+K+A FG
Sbjct: 478 RRALKIYANAPGQQNTIAGIEAQMGVVTYMMGNYSESYDIFKSAISKFRNSGEKKTALFG 537
Query: 466 VLLNQMGLACVQLFKIDEAAQLFEEARAVLEQECGASHPDTLGVYSNLAAIYDAMGRVED 525
+ LNQMGLACVQ + I+EAA LFEEA+ +LE+ECG HPDTL VYSNLA YDAMGR++D
Sbjct: 538 IALNQMGLACVQRYAINEAADLFEEAKTILEKECGPYHPDTLAVYSNLAGTYDAMGRLDD 597
Query: 526 AIEILEHVLKVREEKLGTANPDVXXXXXXXXXXXXXXGRSRNRKQKSLENLFVTNSQ 582
AIEILE+V+ REEKLGTANP+V GR R+++ ++L L N +
Sbjct: 598 AIEILEYVVGTREEKLGTANPEVEDEKQRLAALLKEAGRGRSKRNRALLTLLDNNPE 654
>AT2G31240.1 | chr2:13317570-13319518 REVERSE LENGTH=618
Length = 617
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 11/361 (3%)
Query: 177 MQLGDTHAMLGRMDESIACYGKGLEIQMAALGERDPRVAETCRYLAEAHVQALQFDEAEK 236
++L + +GR +E+I K LEI+ E + R LA+A+V L F+EA
Sbjct: 214 LELANVKNAMGRREEAIENLKKSLEIKEMTFDEDSKEMGVANRSLADAYVAVLNFNEALP 273
Query: 237 LCRKALEIHREHSAPASLEEASDRRLMALILDAKGDYDGALEHLVLASMTMVANGRDIEV 296
KALEIH++ S E A DRRL+ +I +D ALE L+ + G +E+
Sbjct: 274 YALKALEIHKKELGNNSAEVAQDRRLLGVIYSGLEQHDKALEQNRLSQRVLKNWGMKLEL 333
Query: 297 ATIDVAIGNTYLALARFDEAVFSYQKALTVLKSA---RGDDHPSVASVFVRLADLYHRTG 353
++ N +AL +++EA+ +LKS D A VF+ ++
Sbjct: 334 IRAEIDAANMKVALGKYEEAI-------DILKSVVQQTDKDSEMRAMVFISMSKALVNQQ 386
Query: 354 RLRESKSYCENALRVYAKPAPGAAPDEVAGGLMEIAAIYEALGDLDEXXXXXXXXXXXXE 413
+ ESK E A + K A P EVA E+A YE++ + + E
Sbjct: 387 KFAESKRCLEFACEILEKKET-ALPVEVAEAYSEVAMQYESMNEFETAISLLQKTLGILE 445
Query: 414 DSPGQWSTVAGIEAQMGVLYYMVGRYADSRNSFENAVAKLRASGERKSAFFGVLLNQMGL 473
P + + + A++G L GR + + E+A +L+ S K G + N +G
Sbjct: 446 KLPQEQHSEGSVSARIGWLLLFSGRVSQAVPYLESAAERLKESFGAKHFGVGYVYNNLGA 505
Query: 474 ACVQLFKIDEAAQLFEEARAVLEQECGASHPDTLGVYSNLAAIYDAMGRVEDAIEILEHV 533
A ++L + AAQ+F A+ +++ G +H D++ NL+ Y MG A+E + V
Sbjct: 506 AYLELGRPQSAAQMFAVAKDIMDVSLGPNHVDSIDACQNLSKAYAGMGNYSLAVEFQQRV 565
Query: 534 L 534
+
Sbjct: 566 I 566
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,398,343
Number of extensions: 315190
Number of successful extensions: 1117
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1078
Number of HSP's successfully gapped: 5
Length of query: 599
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 495
Effective length of database: 8,255,305
Effective search space: 4086375975
Effective search space used: 4086375975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)