BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0106800 Os02g0106800|AK060675
         (354 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G33230.1  | chr1:12046844-12049794 FORWARD LENGTH=348          419   e-117
AT4G10430.1  | chr4:6455110-6457996 REVERSE LENGTH=348            405   e-113

>AT1G33230.1 | chr1:12046844-12049794 FORWARD LENGTH=348
          Length = 347

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/293 (66%), Positives = 239/293 (81%)

Query: 56  ASLSTLAPTTLDKVEEELERARVTISDSDVAAFLPSKRNGKFLKTFVGPVNVRVARKEDK 115
           AS   L P   +K+EE+L+RAR  ++D D ++FLPSK  G+F++ F+GPVNVR +RK+ +
Sbjct: 55  ASDKHLDPKLFEKLEEDLQRARCMLADGDTSSFLPSKPQGRFVRMFLGPVNVRASRKDIQ 114

Query: 116 LRVKDEYNNYRDRAAYMFXXXXXXXXXXRWWIWDGCLPALAVQMYQAWLLFLYTSFALRE 175
           L+VK+EYN+YRDR A +F          R ++WDGCLPA  VQ+YQAWLLFLY    +RE
Sbjct: 115 LKVKEEYNSYRDRTALLFLVFPAILLTLRSYVWDGCLPAFPVQLYQAWLLFLYAGLVMRE 174

Query: 176 NVLIVNGSDIRPWWIYHHYLAMLMALVSLTWEIKGQPDCSSKQRGVQLFLRWAIMQGIAM 235
           N+L  NGSDIR WW+YHHY AM M+LVSLTWEIKGQP+C  KQ+GV+LFL+WA+MQG+AM
Sbjct: 175 NILRANGSDIRSWWLYHHYFAMAMSLVSLTWEIKGQPNCVQKQKGVRLFLQWAMMQGVAM 234

Query: 236 HLQNRYQRQRLRTRIALGKAKRMDVVAGETAGVEGQLLLLYPVLFTLQVFEGYVGVLLLK 295
            LQNRYQRQRL TRIALGKAKRMDVV GETAGV+GQLLLL+P+LFTLQ FE YVG  LL+
Sbjct: 235 LLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLLLLFPILFTLQGFEAYVGFQLLR 294

Query: 296 TALHGLASEWQVVVCGILLVVMAVGNFVNTMETLMLKLRFKAKMKRAKSRQDL 348
           T L G+ +EWQV+VCGILLVVMA+GNF+NT+ETLM+K RFKAKMKR+KSR +L
Sbjct: 295 TVLMGVVAEWQVLVCGILLVVMAIGNFINTVETLMVKSRFKAKMKRSKSRAEL 347



>AT4G10430.1 | chr4:6455110-6457996 REVERSE LENGTH=348
          Length = 347

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/293 (65%), Positives = 231/293 (78%)

Query: 57  SLSTLAPTTLDKVEEELERARVTISDSDVAAFLPSKRNGKFLKTFVGPVNVRVARKEDKL 116
           S   L P  ++K+EE+L RAR  + D + ++FLPSK  G+F++ F GPVNVR  RK+ +L
Sbjct: 55  SNKNLDPKLVEKLEEDLHRARCMLVDGETSSFLPSKPQGRFVRMFCGPVNVRALRKDVQL 114

Query: 117 RVKDEYNNYRDRAAYMFXXXXXXXXXXRWWIWDGCLPALAVQMYQAWLLFLYTSFALREN 176
           +VK+EYN YRD+ A +F          R + W GCLPA  VQ+Y+AWLLFLY   A+REN
Sbjct: 115 KVKEEYNRYRDKTALLFLFFPATLLILRSYYWGGCLPAFPVQLYEAWLLFLYAGLAMREN 174

Query: 177 VLIVNGSDIRPWWIYHHYLAMLMALVSLTWEIKGQPDCSSKQRGVQLFLRWAIMQGIAMH 236
           +L  NGSDIRPWW+YHHY AM MALVSLTWEIKGQP+C  KQRGV LFL+WA+MQG+AM 
Sbjct: 175 ILRANGSDIRPWWLYHHYCAMAMALVSLTWEIKGQPNCVQKQRGVHLFLQWAMMQGVAML 234

Query: 237 LQNRYQRQRLRTRIALGKAKRMDVVAGETAGVEGQLLLLYPVLFTLQVFEGYVGVLLLKT 296
           LQNRYQRQRL TRIALGKAKRMDVV GETAGV+GQL LL P+LF LQVFE YVG+LLL+ 
Sbjct: 235 LQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQVFEAYVGLLLLRK 294

Query: 297 ALHGLASEWQVVVCGILLVVMAVGNFVNTMETLMLKLRFKAKMKRAKSRQDLS 349
            + G+ +EWQV+VCGILLVVMAVGNF+NT+ETLM K R KAKMKR+KSR +L+
Sbjct: 295 TVTGVVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKSRAELN 347



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.325    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,717,313
Number of extensions: 204950
Number of successful extensions: 630
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 630
Number of HSP's successfully gapped: 2
Length of query: 354
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 254
Effective length of database: 8,364,969
Effective search space: 2124702126
Effective search space used: 2124702126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)