BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0977100 Os01g0977100|Os01g0977100
(298 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12090.1 | chr3:3852326-3853714 REVERSE LENGTH=283 202 2e-52
AT4G23410.1 | chr4:12224094-12225206 FORWARD LENGTH=282 179 1e-45
AT3G45600.1 | chr3:16733973-16735854 REVERSE LENGTH=286 146 1e-35
AT4G28050.1 | chr4:13942566-13943621 REVERSE LENGTH=264 145 3e-35
AT2G23810.1 | chr2:10135859-10137352 REVERSE LENGTH=274 142 2e-34
AT1G18520.1 | chr1:6375051-6376178 FORWARD LENGTH=272 138 3e-33
AT4G30430.1 | chr4:14879029-14880272 REVERSE LENGTH=273 135 2e-32
AT5G46700.1 | chr5:18951035-18952439 FORWARD LENGTH=270 131 4e-31
AT5G60220.1 | chr5:24248957-24250065 FORWARD LENGTH=328 129 2e-30
AT2G19580.1 | chr2:8472393-8475021 REVERSE LENGTH=271 117 7e-27
AT1G63260.1 | chr1:23467105-23468945 REVERSE LENGTH=285 110 8e-25
AT2G03840.1 | chr2:1173170-1174115 FORWARD LENGTH=279 88 5e-18
AT5G23030.1 | chr5:7726819-7727709 FORWARD LENGTH=265 86 2e-17
AT5G57810.1 | chr5:23424466-23425589 REVERSE LENGTH=318 59 4e-09
>AT3G12090.1 | chr3:3852326-3853714 REVERSE LENGTH=283
Length = 282
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 137/248 (55%), Gaps = 4/248 (1%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
SN V+G++NL+TL+AS+PIIG L+ S+ C + LQ PLL IGF+ L+VSLAGF+
Sbjct: 4 FSNTVIGVLNLLTLLASIPIIGTALY--KARSSTTCENFLQTPLLVIGFIILIVSLAGFI 61
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
GAC++V G+ R Y+E+RL DY WL
Sbjct: 62 GACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWL 121
Query: 135 QRHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGCCKPPTACTYYDDAX 194
+ VR YW +C+L+++ C + +WT LDY + D+T VQSGCCKPPTACTY +A
Sbjct: 122 RERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTY--EAG 179
Query: 195 XXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXXXXXFYSCACC 254
DC+RW+N +LCY CD+CKAGVLE++R W Y+ CC
Sbjct: 180 VVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCC 239
Query: 255 AFRNTATA 262
AF NT A
Sbjct: 240 AFHNTRHA 247
>AT4G23410.1 | chr4:12224094-12225206 FORWARD LENGTH=282
Length = 281
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 128/247 (51%), Gaps = 3/247 (1%)
Query: 12 QQHLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLA 71
+SN V+G +N++TL++S+ ++G+ LW+ + C LQ PLL +G L++S+A
Sbjct: 1 MNRMSNTVIGFLNILTLISSIVLLGSALWMGR--SKTTCEHFLQKPLLILGLAILILSVA 58
Query: 72 GFLGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYS 131
G +GAC V G+ R Y+EF+L Y
Sbjct: 59 GLVGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYH 118
Query: 132 SWLQRHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGCCKPPTACTYYD 191
WL+ V YW C+L + C LA WTPLDYL+ DL+P+QSGCCKPPT+C Y
Sbjct: 119 PWLKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYNT 178
Query: 192 DAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXXXXXFYSC 251
D PDCYRW+NA VLCY CD+C+AGVLE +RR WH Y
Sbjct: 179 DT-VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCV 237
Query: 252 ACCAFRN 258
CCAF+N
Sbjct: 238 GCCAFKN 244
>AT3G45600.1 | chr3:16733973-16735854 REVERSE LENGTH=286
Length = 285
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 118/259 (45%), Gaps = 16/259 (6%)
Query: 16 SNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLG 75
SN ++GLVN +T + S+PI+G G+WL + S+ C LQ PL+ IG ++VSLAGF G
Sbjct: 4 SNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAG 63
Query: 76 ACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQ 135
ACY G R Y ++ L DYS WL+
Sbjct: 64 ACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWLK 123
Query: 136 RHVRAERYW-------RPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGCCKPPTAC- 187
V + YW R + AC R + + + +LR L+PV+SGCCKPPT C
Sbjct: 124 DRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRR-LSPVESGCCKPPTDCG 182
Query: 188 -TYYD----DAXXXXXXP--DCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXX 240
+Y + D P DC WSN +LCY C SCKAGVL L++ W
Sbjct: 183 FSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIV 242
Query: 241 XXXXXXXFYSCACCAFRNT 259
FY A A+RN
Sbjct: 243 VLIILVIFYVIAYAAYRNV 261
>AT4G28050.1 | chr4:13942566-13943621 REVERSE LENGTH=264
Length = 263
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 16 SNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLG 75
SN ++G++N T + S+PI+ AG+WL ++ C L P++ +G + VS+AG +G
Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWL-GKNAATECERFLDKPMVVLGIFLMFVSIAGLVG 63
Query: 76 ACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQ 135
AC V R Y+E+ +ADYS+WLQ
Sbjct: 64 ACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQ 123
Query: 136 RHVRAERYWRPALACVLAARACDTL----AAWTPLDYLRNDLTPVQSGCCKPPTACTY-Y 190
+ V + W +C++ + C T A+ D+ +++L +QSGCCKP C + Y
Sbjct: 124 KRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTY 183
Query: 191 DDAXXXXXXP------DCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXX 244
+ P DC W N PG LCY C++CKAG+L+ ++ W
Sbjct: 184 VNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIF 243
Query: 245 XXXFYSCACCAFRNT 259
YS CCAFRN
Sbjct: 244 LIIVYSVGCCAFRNN 258
>AT2G23810.1 | chr2:10135859-10137352 REVERSE LENGTH=274
Length = 273
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 13/270 (4%)
Query: 16 SNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLG 75
SN +VG++N + + S+PI+ G+WL + GS+ C L P++A+G ++V++AG +G
Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWL-SQKGSTECERFLDKPVIALGVFLMVVAIAGLIG 63
Query: 76 ACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQ 135
+C V I + Y+E++L DYS+WLQ
Sbjct: 64 SCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQ 123
Query: 136 RHVRAERYWRPALACVLAARACDTLAAW---TPLD-YLRNDLTPVQSGCCKPPTACTY-- 189
+ V + W +C++ ++ C L A P++ + + LT +QSGCCKP C +
Sbjct: 124 KRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEY 183
Query: 190 ------YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXX 243
+ PDC W NA LC+ C SCKAG+L+ ++ W
Sbjct: 184 VNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLV 243
Query: 244 XXXXFYSCACCAFRNTATATSSKTIFHLHP 273
YS CCAFRN S + P
Sbjct: 244 FLIIVYSVGCCAFRNNKRDDSYSRTYGYKP 273
>AT1G18520.1 | chr1:6375051-6376178 FORWARD LENGTH=272
Length = 271
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 115/270 (42%), Gaps = 16/270 (5%)
Query: 14 HLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGF 73
+SN +VGL N + ++ IG +++ H G + C SA++ PLL G + LVSL G
Sbjct: 3 RVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGV 62
Query: 74 LGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSW 133
+G+C+ R Y+E+R D+S+W
Sbjct: 63 IGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW 122
Query: 134 LQRHVRAERYWRPALACVLAARACDTLA----AWTPLDYLRNDLTPVQSGCCKPPTACTY 189
L V +R W +C+ A CD L+ + + +L+P+QSGCCKPP+ C +
Sbjct: 123 LNGFVGGKR-WVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNF 181
Query: 190 Y-----------DDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXX 238
+ DC WSN LC+ C++CKAGVL +R W
Sbjct: 182 EFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVFN 241
Query: 239 XXXXXXXXXFYSCACCAFRNTATATSSKTI 268
YSC CCA RN TA S ++
Sbjct: 242 ICLLILLITVYSCGCCARRNNRTARKSDSV 271
>AT4G30430.1 | chr4:14879029-14880272 REVERSE LENGTH=273
Length = 272
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
SN +VG++N + SVPI+ G+WL ++ C L P++A+G +++++AG +
Sbjct: 4 FSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAGVV 62
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
G+C V + Y+E+RL YS WL
Sbjct: 63 GSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWL 122
Query: 135 QRHVRAERYWRPALACVLAARACDTL----AAWTPLDYLRNDLTPVQSGCCKPPTAC--- 187
QR V ++W +C+ ++ C L A T D+ + DLT +SGCCKP C
Sbjct: 123 QRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFT 182
Query: 188 ----TYYDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXX 243
T ++ DC W N LCY C +CKAG L+ L+ W
Sbjct: 183 YITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLV 242
Query: 244 XXXXFYSCACCAFRNT 259
Y+ CCAFRN
Sbjct: 243 LLVVVYAMGCCAFRNN 258
>AT5G46700.1 | chr5:18951035-18952439 FORWARD LENGTH=270
Length = 269
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 113/256 (44%), Gaps = 10/256 (3%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
LSN V+G +N +T++ S+P+IGAG+WL A G + C LQ P++ +G + LLV LAGF+
Sbjct: 3 LSNNVIGCINFITVLLSIPVIGAGIWL-AIGTVNSCVKLLQWPVIILGVLILLVGLAGFI 61
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
G + + + R Y E+ L D+S WL
Sbjct: 62 GGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWL 121
Query: 135 QRHVRAERYWRPALACVLAARACDTLAAWTPL--DYLRNDLTPVQSGCCKPPTAC----- 187
+R V+ W C+ C L L D+ L P+QSGCCKPPT C
Sbjct: 122 RRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFV 181
Query: 188 --TYYDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXXX 245
TY+ DC WSN LCY CDSCKAG+L ++ W
Sbjct: 182 NPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGL 241
Query: 246 XXFYSCACCAFRNTAT 261
Y CCAFRN T
Sbjct: 242 IIVYIIGCCAFRNAET 257
>AT5G60220.1 | chr5:24248957-24250065 FORWARD LENGTH=328
Length = 327
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 17 NRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLGA 76
+ ++GL+N T + S+PI+G G+WL + S+ C LQ PL+ IG +++SLAG GA
Sbjct: 5 SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64
Query: 77 CYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQR 136
CY G R Y ++ L DYS WL+
Sbjct: 65 CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124
Query: 137 HVRAERYWRPALACVLAARACDTLA-------AWTPLDYLRNDLTPVQSGCCKPPTAC-- 187
V YWR +CV + C + + Y RN L+PV+SGCCKPPT C
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRN-LSPVESGCCKPPTDCGY 183
Query: 188 TYYDDAX------XXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXX 241
TY ++ PDC W+N +LCY C SCKAGVL L++ W
Sbjct: 184 TYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVV 243
Query: 242 XXXXXXFYSCACCAFRNTATATSSKTI 268
FY AC A++N + + +
Sbjct: 244 VIILVIFYVIACAAYQNVKRMYNDEPV 270
>AT2G19580.1 | chr2:8472393-8475021 REVERSE LENGTH=271
Length = 270
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
L+N + ++NL+ L+ S+PI +G+WL A + C + L+ P++ +G + L+VS GF+
Sbjct: 3 LANNLTAILNLLALLCSIPITASGIWL-ASKPDNECVNLLRWPVVVLGVLILVVSATGFI 61
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
GA + + + R Y+E+RL +S+WL
Sbjct: 62 GAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWL 121
Query: 135 QRHVRAERYWRPALACVLAARACDTL-AAWTPLD--YLRNDLTPVQSGCCKPPTACTY-- 189
+ +V + W AC+ C L + D + + +TP+QSGCCKPPTAC Y
Sbjct: 122 KENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNF 181
Query: 190 -----YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXX 244
+ + DCY WSN LCY C+SCKAG+L LR+ W
Sbjct: 182 VNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVV 241
Query: 245 XXXFYSCACCAFRNTAT 261
Y AC AFRN T
Sbjct: 242 LIWVYVIACSAFRNAQT 258
>AT1G63260.1 | chr1:23467105-23468945 REVERSE LENGTH=285
Length = 284
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 16 SNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLG 75
S V+ VNL+T++ +V +I G+W+ H C +L P++A+G L+S+ GFLG
Sbjct: 6 STFVIRWVNLLTMLLAVAVIIFGVWMSTHNDG--CRRSLTFPVIALGGFIFLISIIGFLG 63
Query: 76 ACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQ 135
AC + Y+E++L DYSSW
Sbjct: 64 ACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFL 123
Query: 136 RHVRAERYWRPALACVLAARACDTLAA-WTPLDYLRN-DLTPVQSGCCKPPTAC------ 187
+ + W +C++ + C L+ + + L++ +LTP+++GCC+PP+ C
Sbjct: 124 KQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVN 183
Query: 188 -TYYDDAX-XXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWH 232
+YYD + DC + N + CY CDSCKAGV + ++ W
Sbjct: 184 ASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWR 230
>AT2G03840.1 | chr2:1173170-1174115 FORWARD LENGTH=279
Length = 278
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 93/246 (37%), Gaps = 24/246 (9%)
Query: 1 MYSRRAAAGGEQQHLSNRVVGLVNLVTLVAS-VPIIGAGLWLQA----HGGSSPCGSALQ 55
M + E + + N + L++S + ++ A W A H + C +
Sbjct: 1 MARDKEDQNNENPSIVQNMSFPFNTIFLISSAIFLVTAAFWFVAVMTLHYRTDECNRFVT 60
Query: 56 APLLAIGFVTLLVSLAGFLGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXX 115
P + I F L +SL GF A +
Sbjct: 61 TPGIFISFSLLAMSLTGFYAAYFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPR 120
Query: 116 XXXXRPYREFRLADYSSWLQRHVRAERYWRPALACVLAARACDTLAAWTPL-DYLRNDLT 174
EFR DYS W+ R V + W C++ C+ L P ++ + +LT
Sbjct: 121 LFPGTKIYEFRYEDYSGWVSRLVIKDDEWYRTRRCLVKDNVCNRLNHKMPASEFYQMNLT 180
Query: 175 PVQSGCCKPPTAC-------------TYYDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKA 221
P+QSGCCKPP +C YY++ DC RW+N+ LC+ CDSCKA
Sbjct: 181 PIQSGCCKPPLSCGLNYEKPNNWTVSRYYNNLEV-----DCKRWNNSADTLCFDCDSCKA 235
Query: 222 GVLEQL 227
++ +
Sbjct: 236 VIIADV 241
>AT5G23030.1 | chr5:7726819-7727709 FORWARD LENGTH=265
Length = 264
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 89/253 (35%), Gaps = 18/253 (7%)
Query: 16 SNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLG 75
+N ++ L+ L L SV + ++Q G S C +Q PL+ + +S G +
Sbjct: 12 TNAILALIGLAALSFSVYV-----YVQ---GPSQCQRFVQNPLIVTAALLFFISSLGLIA 63
Query: 76 ACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQ 135
A Y + R + DY +W+
Sbjct: 64 ALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQNWIG 123
Query: 136 RHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGCCKPPTACTYYDDAXX 195
H + W C+ +R C +D+ L+ VQ GCC+PP C +
Sbjct: 124 NHFLRGKNWEGITKCLSDSRVCKRFGP-RDIDFDSKHLSNVQFGCCRPPVECGFESKNAT 182
Query: 196 XXXXP---------DCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXXXX 246
P DC WSN LCY C+SCK GVL+ +R+ W
Sbjct: 183 WWTVPATATTAIIGDCKAWSNTQRQLCYACESCKIGVLKGIRKRWRILIVVNLLLILLVV 242
Query: 247 XFYSCACCAFRNT 259
YSC CC +N
Sbjct: 243 FLYSCGCCVRKNN 255
>AT5G57810.1 | chr5:23424466-23425589 REVERSE LENGTH=318
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 26/125 (20%)
Query: 133 WLQRHVRAERY-WRPALACVLAARACDTLAAWTPLD--YLRNDLTPVQSGCCKPPTACTY 189
W + + + W +CV AC+ L +P + Y R + P+++GCC PP C
Sbjct: 161 WFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYNRRKMPPIKNGCCMPPETCNM 220
Query: 190 -----------------------YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQ 226
Y D DC W N +LCY C SCK G +
Sbjct: 221 DAINATFWYRRKDEGPPSSMNLMYGDEMMVGRISDCQLWRNDWSILCYDCRSCKFGFIRS 280
Query: 227 LRRHW 231
+RR W
Sbjct: 281 VRRKW 285
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.137 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,621,297
Number of extensions: 188124
Number of successful extensions: 484
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 436
Number of HSP's successfully gapped: 20
Length of query: 298
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 200
Effective length of database: 8,419,801
Effective search space: 1683960200
Effective search space used: 1683960200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)