BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0976600 Os01g0976600|AK072971
         (294 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57300.1  | chr5:23208705-23210611 REVERSE LENGTH=289          433   e-122
AT1G23360.1  | chr1:8295421-8296893 REVERSE LENGTH=262            106   1e-23
AT1G69520.1  | chr1:26128386-26129602 FORWARD LENGTH=232           49   3e-06

>AT5G57300.1 | chr5:23208705-23210611 REVERSE LENGTH=289
          Length = 288

 Score =  433 bits (1113), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/268 (75%), Positives = 236/268 (88%)

Query: 27  TAFLHSHATSFGYKQVAEEDKSKLVGNVFSSVASSYDLMNDLMSVGLHRLWKDRLISKLN 86
            A LHSHATSFG+++V EE+KSKLVGNVF++VASSYD+MND+MS GLHRLWK+RL+ KL+
Sbjct: 21  VASLHSHATSFGFQEVKEEEKSKLVGNVFTNVASSYDIMNDVMSGGLHRLWKERLVGKLS 80

Query: 87  PFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQGTLTDIEEETQIYVCDINPNMLNVGK 146
           PF GMKHLDVAGGTGDVAFR  + + SV  RA+Q       EETQIYVCDINPNMLNVGK
Sbjct: 81  PFAGMKHLDVAGGTGDVAFRIYDAVYSVKRRALQKVDEASLEETQIYVCDINPNMLNVGK 140

Query: 147 KRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSEAYRVLKRG 206
           +RA+ERG ++   L W++GDAEALSF+D SMDGYTIAFGIRNVTHIEKAL+EAYRVLKRG
Sbjct: 141 QRAAERGLRDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRG 200

Query: 207 GRFLCLELSHVDVPLFKEIYDVYSFSVIPAVGELVAGDRQSYQYLVESIRRFPNQEKFAQ 266
           GRFLCLELSHV++P+FK +YD+YSF VIP +GEL+AGDR+SYQYLVES+RRFP QE+FA 
Sbjct: 201 GRFLCLELSHVEIPVFKNLYDLYSFQVIPNLGELIAGDRESYQYLVESVRRFPPQERFAS 260

Query: 267 MIQEAGFERVEYENLVGGVVAIHSGLKL 294
           MI +AGFE+VEYENLVGGVVAIHS +KL
Sbjct: 261 MIADAGFEKVEYENLVGGVVAIHSAIKL 288



>AT1G23360.1 | chr1:8295421-8296893 REVERSE LENGTH=262
          Length = 261

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 22/234 (9%)

Query: 54  VFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINS 113
           +F+ +A  YD +NDL+S+G HR+WK+  +S      G   LD+  G+GD+AF   E++ S
Sbjct: 38  LFNRIAPVYDNLNDLLSLGQHRIWKNMAVSWSGAKKGDYVLDLCCGSGDLAFLLSEKVGS 97

Query: 114 VSHRAMQGTLTDIEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFE 173
                            ++   D +   L V   R S +      C+ WI+GDA  L F+
Sbjct: 98  TG---------------KVMGLDFSSEQLAVAATRQSLKARSCYKCIEWIEGDAIDLPFD 142

Query: 174 DGSMDGYTIAFGIRNVTHIEKALSEAYRVLKRGGRFLCLEL--SHVDVPLFKEIYDVYSF 231
           D   D  T+ +G+RNV    +A+ E YRVLK G R   L+   S+  V  F + + + + 
Sbjct: 143 DCEFDAVTMGYGLRNVVDRLRAMKEMYRVLKPGSRVSILDFNKSNQSVTTFMQGWMIDNV 202

Query: 232 SV-IPAVGELVAGDRQSYQYLVESIRRFPNQEKFAQMIQEAGFERVEYENLVGG 284
            V +  V +L     + Y+YL  SI  +   E+   +  EAGF    +  + GG
Sbjct: 203 VVPVATVYDLA----KEYEYLKYSINGYLTGEELETLALEAGFSSACHYEISGG 252



>AT1G69520.1 | chr1:26128386-26129602 FORWARD LENGTH=232
          Length = 231

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 132 IYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTH 191
           +Y  D NP M    +K A++ G K  +   + QG  EA+  +D S+D       + +V+ 
Sbjct: 80  LYGLDPNPKMKKYARKSATKAGLKPKN-FRFKQGVGEAIPLKDNSVDAVVATLVLCSVSD 138

Query: 192 IEKALSEAYRVLKRGGRFLCLE-LSHVDVPLFKEI 225
           + + L E  RVL++GG F+ LE ++  D   FK +
Sbjct: 139 VTQTLKEIKRVLRQGGVFIFLEHVAAKDGSFFKRL 173



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,057,323
Number of extensions: 246868
Number of successful extensions: 594
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 594
Number of HSP's successfully gapped: 3
Length of query: 294
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 196
Effective length of database: 8,419,801
Effective search space: 1650280996
Effective search space used: 1650280996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)