BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0972200 Os01g0972200|AY302058
(352 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59520.1 | chr5:23991447-23992762 REVERSE LENGTH=354 342 1e-94
AT1G55910.1 | chr1:20906161-20907225 FORWARD LENGTH=327 329 1e-90
AT4G19690.2 | chr4:10707487-10708723 FORWARD LENGTH=348 62 6e-10
AT2G30080.1 | chr2:12838730-12840112 REVERSE LENGTH=342 57 1e-08
AT2G32270.1 | chr2:13704278-13706612 FORWARD LENGTH=340 54 1e-07
AT3G12750.1 | chr3:4051950-4053156 REVERSE LENGTH=356 52 4e-07
AT2G04032.1 | chr2:1289944-1291251 FORWARD LENGTH=366 52 5e-07
AT4G33020.1 | chr4:15932603-15934267 REVERSE LENGTH=345 49 4e-06
>AT5G59520.1 | chr5:23991447-23992762 REVERSE LENGTH=354
Length = 353
Score = 342 bits (878), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/331 (53%), Positives = 222/331 (67%), Gaps = 13/331 (3%)
Query: 30 HGGINDGDGQVDAPATPASSS-----GVRSKGLIAVKVWCLVILLVFTFAGGVSPYFYRW 84
HGGI+DGD + + P ++ +RSK L+ VK++C++IL TF GVSPYFYRW
Sbjct: 28 HGGIDDGDEEEETNQPPPATGTTTVVNLRSKSLVLVKIYCIIILFFSTFLAGVSPYFYRW 87
Query: 85 NESFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLTTNQYPFSFMLTCVGFLLTMLSDLV 144
NESFLLLGTQF+ G+FL TAL+HFL+D+ TF+GL +YP++FML G+ LTML+
Sbjct: 88 NESFLLLGTQFSGGIFLATALIHFLSDANETFRGLKHKEYPYAFMLAAAGYCLTMLA--- 144
Query: 145 IXXXXXXXXXXXXXDNQVSEXXXXXXAEGAVMSRKE---EEAAAVAHPAMLVRTSSFEDA 201
+N V + V ++E E + V L+RTS F D
Sbjct: 145 --DVAVAFVAAGSNNNHVGASVGESREDDDVAVKEEGRREIKSGVDVSQALIRTSGFGDT 202
Query: 202 VLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRPFLM 261
LLI ALCFHS+FEGIAIG+S +KS+AWRNLWTI LHK+FAAVAMGIALL++IPKRPF +
Sbjct: 203 ALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFL 262
Query: 262 TVVYSLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISMGLATGVFIYVAINHLIAKGYR 321
TVVYS AF +SSP+GVGIGI I+ATSQG DWTYAISMGLA GVF+YVA+NHLI+KGY+
Sbjct: 263 TVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVNHLISKGYK 322
Query: 322 PHHPTAADKPLFKFXXXXXXXXXXXXXXIWD 352
P DKP++KF IWD
Sbjct: 323 PREECYFDKPIYKFIAVFLGVALLSVVMIWD 353
>AT1G55910.1 | chr1:20906161-20907225 FORWARD LENGTH=327
Length = 326
Score = 329 bits (844), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/334 (51%), Positives = 215/334 (64%), Gaps = 34/334 (10%)
Query: 27 CSGHGGINDGDGQVDAPATPASSSGVRSKGLIAVKVWCLVILLVFTFAGGVSPYFYRWNE 86
C HG D D D A+ SS ++SK LI+VK+ CLVI+ V TF GVSPYF +W++
Sbjct: 18 CLSHGTGGDHD---DDEASHVKSSDLKSKSLISVKIACLVIIFVLTFISGVSPYFLKWSQ 74
Query: 87 SFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLTTNQ--------YPFSFMLTCVGFLLT 138
FL+LGTQFA GVFL TALMHFL+D+ TF+GL T + YPF++ML C GF+LT
Sbjct: 75 GFLVLGTQFAGGVFLATALMHFLSDADETFRGLLTAEGESEPSPAYPFAYMLACAGFMLT 134
Query: 139 MLSDLVIXXXXXXXXXXXXXDNQVSEXXXXXXAEGAVMSRKEEEAAAVAHPAMLVRTSSF 198
ML+D VI + S+ +G K + +A +S
Sbjct: 135 MLADSVIA-------------HIYSKTQNDLELQG---EDKSNQRSATTE-------TSI 171
Query: 199 EDAVLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRP 258
D++LLIVALCFHSVFEGIAIG+S +KS+AWR LWTI LHKIFAA+AMGIALLRMIP RP
Sbjct: 172 GDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRP 231
Query: 259 FLMTVVYSLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISMGLATGVFIYVAINHLIAK 318
++ YS AFA+SSP+GV IGI IDAT+QG ADW +A+SM LA GVF+YV++NHL+AK
Sbjct: 232 LFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVNHLLAK 291
Query: 319 GYRPHHPTAADKPLFKFXXXXXXXXXXXXXXIWD 352
GYRP+ D+P +KF IWD
Sbjct: 292 GYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWD 325
>AT4G19690.2 | chr4:10707487-10708723 FORWARD LENGTH=348
Length = 347
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 38/315 (12%)
Query: 42 APATPASSSG---VRSKGLIAVKVWCLVILLVFTFAGGVSPYFYRWNESFL-------LL 91
AP S S V + +KV + ++L+ + G +P F R N SFL +
Sbjct: 30 APEECGSESANPCVNKAKALPLKVIAIFVILIASMIGVGAPLFSR-NVSFLQPDGNIFTI 88
Query: 92 GTQFAAGVFLGTALMHFLADSTSTFKGLTTNQ-----YPFSFMLTCVGFLLTMLSDLVIX 146
FA+G+ LGT MH L DS + + +PFS GF L MLS L+
Sbjct: 89 IKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFS------GF-LAMLSGLITL 141
Query: 147 XXXXXXXXXXXXDNQV-----SEXXXXXXAEGAVMSRKEEEAAAVAHPAMLVRTSSFEDA 201
N V A + KE++++ A L+R A
Sbjct: 142 AIDSMATSLYTSKNAVGIMPHGHGHGHGPANDVTLPIKEDDSSN----AQLLRYRVI--A 195
Query: 202 VLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRPFLM 261
++L + + HSV G+++G ++ + + H++F + +G +L+ + +
Sbjct: 196 MVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMGLGGCILQ--AEYTNMK 253
Query: 262 TVVYSLAFAVSSPVGVGIGIAIDATSQGRA--ADWTYAISMGLATGVFIYVAINHLIAKG 319
V + FAV++P G+ +GIA+ Q + A T + + G+ IY+A+ L+A
Sbjct: 254 KFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAE 313
Query: 320 YRPHHPTAADKPLFK 334
+ + K FK
Sbjct: 314 FMGPKLQGSIKMQFK 328
>AT2G30080.1 | chr2:12838730-12840112 REVERSE LENGTH=342
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 42/299 (14%)
Query: 47 ASSSGVRSKGLIAVKVWCLVILLVFTFAGGV--SPYFY---RWNESFLLLGTQFAAGVFL 101
A G + L V V+ + + VF G V + YF+ ++++ L++ FAAGV L
Sbjct: 16 ACRDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKAILVIKC-FAAGVIL 74
Query: 102 GTALMHFLADSTSTFKGLTTNQ---------YPFSFMLTCVGFLLTMLSDLVIXXXXXXX 152
T+L+H L ++ F+ L Q +PF+ ++T +G + +L DL
Sbjct: 75 STSLVHVLPEA---FESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVDLT--ASEHMG 129
Query: 153 XXXXXXDNQVSEXXXXXXAEGAVMSRKEEEAAAVAHPAMLVRTSSFEDAV---------L 203
+ E A G + KE + A + ++ +S E+ V +
Sbjct: 130 HGGGGGGDGGMEYMPVGKAVGG-LEMKEGKCGA----DLEIQENSEEEIVKMKQRLVSQV 184
Query: 204 LIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRPFLMTV 263
L + + FHSV G+ +G+S +K + + H+IF + +G + + K TV
Sbjct: 185 LEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLGGCIAQAGFKAG---TV 241
Query: 264 VY-SLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISMGL----ATGVFIYVAINHLIA 317
VY L FAV++P+G+ +G+ I A + + I GL ++G+ IY+A+ LIA
Sbjct: 242 VYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSGILIYMALVDLIA 300
>AT2G32270.1 | chr2:13704278-13706612 FORWARD LENGTH=340
Length = 339
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 28/266 (10%)
Query: 66 VILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLADSTSTFKG--LTTN- 122
+I ++F G V P R F + FAAGV L T MH L ++ LT+
Sbjct: 66 IIGVLFPLLGKVFPSL-RPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPCLTSEA 124
Query: 123 -QYPFSFMLTCVGFLLTMLSDLVIXXXXXXXXXXXXXDNQVSEXXXXXXAEGAVMSRKEE 181
++PF+ + + +LT+ D +VS+ E +V S K +
Sbjct: 125 WEFPFTGFIAMIAAILTLSVD--TFATSSFYKSHCKASKRVSDGET---GESSVDSEKVQ 179
Query: 182 EAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIF 241
++RT A +L + + HSV GI++G S S A + H+ F
Sbjct: 180 ----------ILRTRVI--AQVLELGIIVHSVVIGISLGASQSPDAAKALFIALMFHQCF 227
Query: 242 AAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVG--VGIGIAIDATSQGRAADWTYAIS 299
+ +G + + K L + S FA+++P+G VG+GIA A +
Sbjct: 228 EGLGLGGCIAQ--GKFKCLSVTIMSTFFAITTPIGIVVGMGIANSYDESSPTALIVQGVL 285
Query: 300 MGLATGVFIYVAINHLIAKGYRPHHP 325
+ G+ IY+++ L+A + HP
Sbjct: 286 NAASAGILIYMSLVDLLAADFT--HP 309
>AT3G12750.1 | chr3:4051950-4053156 REVERSE LENGTH=356
Length = 355
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 114/285 (40%), Gaps = 36/285 (12%)
Query: 60 VKVWCLVILLVFTFAGGVS----------PYFYRWNESFLLLGTQFAAGVFLGTALMHFL 109
+K+ + +LLV AGGV P N+ F ++ FAAGV L T +H L
Sbjct: 50 LKLGSIALLLV---AGGVGVSLPLIGKRIPALQPENDIFFMV-KAFAAGVILCTGFVHIL 105
Query: 110 AD-----STSTFKGLTTNQYPFS---FMLTCVGFLLTMLSDLVIXXXXXXXXXXXXXDNQ 161
D S+ + T ++PF+ ML+ +G L M+ Q
Sbjct: 106 PDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTL--MIDTFATGYYKRQHFSNNHGSKQ 163
Query: 162 VSEXXXXXXAEGAVMSRKEEEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGV 221
V+ G V L+R +L + + HSV GI++G
Sbjct: 164 VNVVVDEEEHAGHVHIHTHASHGHTHGSTELIRRRIVSQ--VLEIGIVVHSVIIGISLGA 221
Query: 222 SASKSEAWRNLWTIGLHKIFAAVAMG--IALLRMIPKRPFLMTVVYSLAFAVSSPVGVGI 279
S S + + H+ F + +G I+L M K LM F+V++P+G+GI
Sbjct: 222 SQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMATF----FSVTAPLGIGI 277
Query: 280 GIAIDA----TSQGRAADWTYAISMGLATGVFIYVAINHLIAKGY 320
G+ + + + + A + + G+ IY+++ L+A +
Sbjct: 278 GLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDF 322
>AT2G04032.1 | chr2:1289944-1291251 FORWARD LENGTH=366
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 35/287 (12%)
Query: 60 VKVWCLVILLVFTFAGGVSPYFYRW------NESFLLLGTQFAAGVFLGTALMHFLADST 113
+K+ + +LV + G P F R + ++ A+GV L T MH L DS
Sbjct: 55 LKIIAIPSILVASMIGVSLPLFSRSIPALGPDREMSVIVKTLASGVILATGFMHVLPDS- 113
Query: 114 STFKGLTT--------NQYPFSFMLTCVGFLLTMLSDLVIXXXXXXXXXXXXXD------ 159
F LT+ ++PF+ +T + LL ++ + +
Sbjct: 114 --FDDLTSKCLPEDPWQKFPFATFITMISALLVLMIESFAMCAYARRTSKREGEVVPLEN 171
Query: 160 --NQVSEXXXXXXAEGAVMSRKEEEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGI 217
N V E +++E + L+R A +L + + HSV G+
Sbjct: 172 GSNSVDTQNDIQTLENGSSYVEKQEKVNEDKTSELLRNKVI--AQILELGIVVHSVVIGL 229
Query: 218 AIGVSASKSEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVGV 277
A+G S +K + + H++F + +G ++L+ K T+V+ F+V++P G+
Sbjct: 230 AMGASDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMVF--FFSVTTPFGI 287
Query: 278 GIGIAI----DATSQGRAADWTYAISMGLATGVFIYVAINHLIAKGY 320
+G+AI D TS A + + G+ IY+A+ +L+A +
Sbjct: 288 VLGMAIQKIYDETSP--TALIVVGVLNACSAGLLIYMALVNLLAHEF 332
>AT4G33020.1 | chr4:15932603-15934267 REVERSE LENGTH=345
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 203 LLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIFAAVAMG--IALLRMIPKRPFL 260
+L + + HS+ GI++GVS S L + H+ F A+G +A R+ P+ +
Sbjct: 194 ILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAM 253
Query: 261 MTVVYSLAFAVSSPVGVGIGIAIDAT--SQGRAADWTYAISMGLATGVFIYVAINHLIAK 318
M + FA+++P+GV +G AI ++ S AA + L+ G+ +Y+A+ LIA
Sbjct: 254 M----AFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAA 309
Query: 319 GY 320
+
Sbjct: 310 DF 311
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,886,411
Number of extensions: 211779
Number of successful extensions: 751
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 746
Number of HSP's successfully gapped: 11
Length of query: 352
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 252
Effective length of database: 8,364,969
Effective search space: 2107972188
Effective search space used: 2107972188
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)