BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0961200 Os01g0961200|AK105424
(533 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52950.1 | chr3:19634866-19636536 FORWARD LENGTH=557 551 e-157
AT2G36500.1 | chr2:15318473-15320083 FORWARD LENGTH=537 526 e-149
AT5G50530.1 | chr5:20571876-20574922 REVERSE LENGTH=549 476 e-135
AT5G50640.1 | chr5:20605218-20608264 REVERSE LENGTH=549 476 e-135
AT5G63490.1 | chr5:25418716-25421970 REVERSE LENGTH=544 446 e-125
AT1G47271.1 | chr1:17328856-17330343 FORWARD LENGTH=194 49 6e-06
>AT3G52950.1 | chr3:19634866-19636536 FORWARD LENGTH=557
Length = 556
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/440 (61%), Positives = 348/440 (79%), Gaps = 7/440 (1%)
Query: 51 ERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGILTAEDISGRVIA 110
ERTVKKLRL+KALT+PE T+V +ACRRMA +RVDA LLTDS+ +LSGI+T +D++ RVIA
Sbjct: 61 ERTVKKLRLSKALTIPEGTTVFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIA 120
Query: 111 EGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIAMLDITKFL 170
EGLRPD+T V+K MTRNP+FV S+S A+EALQKMV+GKFRHLPVVE+GEVIA+LDITK L
Sbjct: 121 EGLRPDQTLVSKVMTRNPIFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDITKCL 180
Query: 171 YDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITENNX 230
YDAISRMEKAAEQGSA+AAA+EGVE+QWG+ + P++FIE LR+++FKP+LSTIIT+N+
Sbjct: 181 YDAISRMEKAAEQGSALAAAVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITDNSK 240
Query: 231 XXXXXXXXXXIAAAKKMREYRVNSVVVMTGNMLLGILTSKDLVLRLVAQSLSPDVTLVEK 290
AAK+MR+ RVNSV++ TGN + GILTSKD+++R+VAQ+LSP++TLVEK
Sbjct: 241 VALVAPSDPVSVAAKRMRDLRVNSVIISTGNKISGILTSKDILMRVVAQNLSPELTLVEK 300
Query: 291 VMTTNPDCATLDTSILEALHSMQDGKYLHIPVADKNGQIIACLDALQLTHAAISMVEGAS 350
VMT NP+CA+L+T+IL+ALH+M DGK+LH+P+ DK+G AC+D LQ+THAAISMVE +S
Sbjct: 301 VMTPNPECASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVENSS 360
Query: 351 EA-NSMANTMMQKFWDSALALQ-PXXXXXXXXXXXXMATSDNAEGKHIPP-HVGNSFSFK 407
A N MANTMMQKFWDSALAL+ P M SD + P +GNSFSFK
Sbjct: 361 GAVNDMANTMMQKFWDSALALEPPDDSDTQSEMSAMMHHSDIGKLSSYPSLGLGNSFSFK 420
Query: 408 LQDRKGRMHRFSCVSESLDELVSAVSYRLGMEKEKI----NLLYDDDEGDRVVLTTDGDL 463
+D KGR+HRF+ +E+L+EL+ V R+G + + ++Y+DDEGD+V++T+D DL
Sbjct: 421 FEDLKGRVHRFTSGAENLEELMGIVMQRIGSDNNNVEQRPQIIYEDDEGDKVLITSDSDL 480
Query: 464 SAAIQHARSAGWKVLRLHMD 483
A+ ARS G KVLRLH+D
Sbjct: 481 VGAVTLARSTGQKVLRLHLD 500
>AT2G36500.1 | chr2:15318473-15320083 FORWARD LENGTH=537
Length = 536
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/453 (59%), Positives = 340/453 (75%), Gaps = 14/453 (3%)
Query: 37 SNSKPASPVQAP--SPERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGM 94
+ SKP SP+ P ERTVKKLRL+KALT+ E T+V +ACRRMA +RVDA LLTDS+ +
Sbjct: 43 NTSKPDSPLAQPVSDGERTVKKLRLSKALTINEGTTVFDACRRMAARRVDAVLLTDSSAL 102
Query: 95 LSGILTAEDISGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPV 154
LSGI+T +DI+ RVIAEGLRP+ T V+K MTRNP+FV S+S AIEALQKMV+GKFRHLPV
Sbjct: 103 LSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNPIFVTSDSLAIEALQKMVQGKFRHLPV 162
Query: 155 VEHGEVIAMLDITKFLYDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHSFIENLRD 214
VE+GEVIA+LDITK LYDAISRMEKAAEQGSA+A A+E ER WG+ G +FI+ LR+
Sbjct: 163 VENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVE--ERHWGS---GNFAFIDTLRE 217
Query: 215 QLFKPSLSTIITENNXXXXXXXXXXXIAAAKKMREYRVNSVVVMTGNMLLGILTSKDLVL 274
++FKP+LSTI+TEN A+KKMR+ RVNSV++ GN + GILTSKD+++
Sbjct: 218 RMFKPALSTIVTENTKVALVSASDPVFVASKKMRDLRVNSVIIAVGNKIHGILTSKDILM 277
Query: 275 RLVAQSLSPDVTLVEKVMTTNPDCATLDTSILEALHSMQDGKYLHIPVADKNGQIIACLD 334
R+VAQ+LSP++TLVEKVMT NP+CA+++T+IL+ALH M DGK+LH+PV DK+G +ACLD
Sbjct: 278 RVVAQNLSPELTLVEKVMTPNPECASIETTILDALHIMHDGKFLHLPVFDKDGFAVACLD 337
Query: 335 ALQLTHAAISMVEGASEA--NSMANTMMQKFWDSALALQPXXXXXXXXXXXXMATSDNAE 392
LQ+THAAIS VE S N MANTMMQKFWDSALAL+P M N+E
Sbjct: 338 VLQITHAAISTVENNSSGAVNDMANTMMQKFWDSALALEPPEDYETHSDMSAMLI--NSE 395
Query: 393 GKHIPPHVG--NSFSFKLQDRKGRMHRFSCVSESLDELVSAVSYRLGMEKEKINLLYDDD 450
GK P G +SF+FK +DRKGR+ RF+ ES +EL+S V R + + ++Y DD
Sbjct: 396 GKQSCPSQGLVSSFAFKFEDRKGRVQRFNSTGESFEELMSVVMQRCEADS-GLQIMYQDD 454
Query: 451 EGDRVVLTTDGDLSAAIQHARSAGWKVLRLHMD 483
EGD+V+++ D DL AA+ ARS G KVLRLH+D
Sbjct: 455 EGDKVLISRDSDLVAAVTFARSLGQKVLRLHLD 487
>AT5G50530.1 | chr5:20571876-20574922 REVERSE LENGTH=549
Length = 548
Score = 476 bits (1226), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 321/440 (72%), Gaps = 6/440 (1%)
Query: 49 SPERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGILTAEDISGRV 108
S ERTVK+LRL KALT+P++T++ EACRRMA +RVDA LLTDSN +L GILT DI+ +V
Sbjct: 58 SGERTVKRLRLCKALTVPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIATKV 117
Query: 109 IAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIAMLDITK 168
IA+ L +ET V+K MT+NPVFV+S++ A+EALQKMV+GKFRHLPVVE+GEVIA+LDI K
Sbjct: 118 IAKQLNLEETPVSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGEVIALLDIAK 177
Query: 169 FLYDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITEN 228
LYDAI+RME++ E+G AIAAA+EGVE+ WG GP++F+E LR+++FKPSLSTII EN
Sbjct: 178 CLYDAIARMERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTIIPEN 237
Query: 229 NXXXXXXXXXXXIAAAKKMREYRVNSVVVMTGNMLLGILTSKDLVLRLVAQSLSPDVTLV 288
+ KM EY+ ++ +VM N L+GILTSKD+++R+++Q+L + T V
Sbjct: 238 TKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQETTTV 297
Query: 289 EKVMTTNPDCATLDTSILEALHSMQDGKYLHIPVADKNGQIIACLDALQLTHAAISMV-E 347
EKVMT NP+ AT+D +I+EALH M +GK+LH+PV DK+G ++A +D + +THAA++
Sbjct: 298 EKVMTPNPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAVTTAGS 357
Query: 348 GASEANSMANTMMQKFWDSALALQPXXX-XXXXXXXXXMATSDNAEGKHIPPHVGNSFSF 406
A N AN+MMQKFWDSA+AL P M S E + N+F+F
Sbjct: 358 TAGINNETANSMMQKFWDSAMALSPNEDGDETRSEEESMKLSSEIEVTKSFSY-PNTFAF 416
Query: 407 KLQDRKGRMHRFSCVSESLDELVSAVSYRLGMEKEKINL---LYDDDEGDRVVLTTDGDL 463
KLQD+KGRMHRF C ++SL L++A+ R+G + E NL +Y+D++ D+VVL +D DL
Sbjct: 417 KLQDKKGRMHRFMCETQSLTTLITAILQRMGDDIEPDNLPQIMYEDEDNDKVVLASDNDL 476
Query: 464 SAAIQHARSAGWKVLRLHMD 483
AA++HA+S GWK L+LH+D
Sbjct: 477 GAAVEHAKSIGWKGLKLHLD 496
>AT5G50640.1 | chr5:20605218-20608264 REVERSE LENGTH=549
Length = 548
Score = 476 bits (1226), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 321/440 (72%), Gaps = 6/440 (1%)
Query: 49 SPERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGILTAEDISGRV 108
S ERTVK+LRL KALT+P++T++ EACRRMA +RVDA LLTDSN +L GILT DI+ +V
Sbjct: 58 SGERTVKRLRLCKALTVPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIATKV 117
Query: 109 IAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIAMLDITK 168
IA+ L +ET V+K MT+NPVFV+S++ A+EALQKMV+GKFRHLPVVE+GEVIA+LDI K
Sbjct: 118 IAKQLNLEETPVSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGEVIALLDIAK 177
Query: 169 FLYDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITEN 228
LYDAI+RME++ E+G AIAAA+EGVE+ WG GP++F+E LR+++FKPSLSTII EN
Sbjct: 178 CLYDAIARMERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTIIPEN 237
Query: 229 NXXXXXXXXXXXIAAAKKMREYRVNSVVVMTGNMLLGILTSKDLVLRLVAQSLSPDVTLV 288
+ KM EY+ ++ +VM N L+GILTSKD+++R+++Q+L + T V
Sbjct: 238 TKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLVGILTSKDILMRVISQNLPQETTTV 297
Query: 289 EKVMTTNPDCATLDTSILEALHSMQDGKYLHIPVADKNGQIIACLDALQLTHAAISMV-E 347
EKVMT NP+ AT+D +I+EALH M +GK+LH+PV DK+G ++A +D + +THAA++
Sbjct: 298 EKVMTPNPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAVTTAGS 357
Query: 348 GASEANSMANTMMQKFWDSALALQPXXX-XXXXXXXXXMATSDNAEGKHIPPHVGNSFSF 406
A N AN+MMQKFWDSA+AL P M S E + N+F+F
Sbjct: 358 TAGINNETANSMMQKFWDSAMALSPNEDGDETRSEEESMKLSSEIEVTKSFSY-PNTFAF 416
Query: 407 KLQDRKGRMHRFSCVSESLDELVSAVSYRLGMEKEKINL---LYDDDEGDRVVLTTDGDL 463
KLQD+KGRMHRF C ++SL L++A+ R+G + E NL +Y+D++ D+VVL +D DL
Sbjct: 417 KLQDKKGRMHRFMCETQSLTTLITAILQRMGDDIEPDNLPQIMYEDEDNDKVVLASDNDL 476
Query: 464 SAAIQHARSAGWKVLRLHMD 483
AA++HA+S GWK L+LH+D
Sbjct: 477 GAAVEHAKSIGWKGLKLHLD 496
>AT5G63490.1 | chr5:25418716-25421970 REVERSE LENGTH=544
Length = 543
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/447 (52%), Positives = 319/447 (71%), Gaps = 7/447 (1%)
Query: 43 SPVQAPSPERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGILTAE 102
SP+ ERTVK+LRL+KALT+P T++ EAC+RMA +RVDA LLTDSN ML GILT +
Sbjct: 44 SPLGLTGGERTVKRLRLSKALTVPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDK 103
Query: 103 DISGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHGEVIA 162
DI+ RVI++ L +ET V+K MT+NP+FV+S + A+EALQKMV+GKFRHLPVVE+GEVIA
Sbjct: 104 DIATRVISQELNVEETPVSKVMTKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGEVIA 163
Query: 163 MLDITKFLYDAISRMEKAAEQGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLS 222
+LDI K LYDAI+RME+AAE+G AIAAA+EGVE+ WG + P++FIE LRD++F+PSLS
Sbjct: 164 LLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKSWGTNTSVPNTFIETLRDRMFRPSLS 223
Query: 223 TIITENNXXXXXXXXXXXIAAAKKMREYRVNSVVVMTGNMLLGILTSKDLVLRLVAQSLS 282
TII ++ + AKKM E++ + VV+ + L GI TSKD+++R+VA++L
Sbjct: 224 TIIPDDTKVLKVSPTDTVLTVAKKMVEFQSSCAVVIIEDKLRGIFTSKDILMRVVAENLP 283
Query: 283 PDVTLVEKVMTTNPDCATLDTSILEALHSMQDGKYLHIPVADKNGQIIACLDALQLTHAA 342
P TLVE VMT NP+ +DT I+EALH M +GK+LH+PV DK G ++A +D + +THAA
Sbjct: 284 PSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPVTDKEGDVVAVVDVIHVTHAA 343
Query: 343 ISMVEGASE-ANSMANTMMQKFWDSALALQPXXXXXXXXXXXXMATSDNAE-GKHIPPHV 400
++ + N NTMMQKFWDSA+AL P M + AE GK P
Sbjct: 344 VATAGTTAGIGNEATNTMMQKFWDSAMALSPNEDDEDSRSESSMKVASEAETGKSFP--F 401
Query: 401 GNSFSFKLQDRKGRMHRFSCVSESLDELVSAVSYRLGMEKEKIN---LLYDDDEGDRVVL 457
N+FSFK++D+K R HRF + SL E+++A+ R+G + + N +LY+D++ D+V+L
Sbjct: 402 ANTFSFKIEDKKHRKHRFISDTRSLTEVITAIIQRVGDDIDPDNFPQILYEDEDHDKVLL 461
Query: 458 TTDGDLSAAIQHARSAGWKVLRLHMDE 484
+D DL AAI+HA+S GWK LRLH+D+
Sbjct: 462 ASDSDLQAAIEHAKSIGWKSLRLHLDD 488
>AT1G47271.1 | chr1:17328856-17330343 FORWARD LENGTH=194
Length = 193
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 48 PSPERTVKKLRLAKALTLPEAT-----------SVSEACRRMALKRVDAALLTD--SNGM 94
P PE+ ++ L +A L+ + +VS+A + MA + + ++ +
Sbjct: 34 PPPEKGLENLTVADVLSTKDTDIDTWISCRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQY 93
Query: 95 LSGILTAEDISGRVIAEGLRPDETNVAKAMTRNP--VFVMSNSPAIEALQKMVKGKFRHL 152
++GI+T D ++I G T V + MT V V S + I+A+Q M + RH+
Sbjct: 94 IAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHV 153
Query: 153 PVVEHGEV--IAMLDITKFLYD 172
PV++ V I+M+D+ K + D
Sbjct: 154 PVIDGKIVGLISMVDVVKAIVD 175
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,537,466
Number of extensions: 352981
Number of successful extensions: 1042
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1013
Number of HSP's successfully gapped: 7
Length of query: 533
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 430
Effective length of database: 8,282,721
Effective search space: 3561570030
Effective search space used: 3561570030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)