BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0958700 Os01g0958700|AK064908
(608 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607 804 0.0
AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613 600 e-172
AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628 448 e-126
AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562 432 e-121
>AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607
Length = 606
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/596 (66%), Positives = 478/596 (80%), Gaps = 6/596 (1%)
Query: 1 MAHKAKLQSVSESAIRSIGLGYDIANDIRLKNCKQRGSPDPLLIEL-DHDKVQDIVLPGN 59
MA + +E AI SIG GYD+A D+RLK CK GS D L+++ + D +IVLPG
Sbjct: 1 MALRLPASKAAEVAIGSIGCGYDLAIDLRLKYCKG-GSKDSRLLDIKEGDDNCEIVLPGG 59
Query: 60 LTVTGVSKSIKCDKGERMRFRSDVLSFQQMSEQFNRELSLSGKIPSGFFNAMFEFTGCWQ 119
+++ VSKSIKCDKGERMRFRSD+L FQQM+EQFN+ELSL+GKIPSG FNAMFEF+ CWQ
Sbjct: 60 ISIPNVSKSIKCDKGERMRFRSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEFSSCWQ 119
Query: 120 KDASITKSLAFDGWCITLYTVALSKAHIILKDHVKQAVPSTWEPAALARFIKKFGTHIVV 179
KDA+ TK+LAFDG I+LY+VAL K+ ++L++HVKQAVPSTW+PAALARFI +GTHI+V
Sbjct: 120 KDAAYTKNLAFDGVFISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIV 179
Query: 180 GVKMGGKDVIYLKQQHSSSLQAVDVQKRLKEMSDQRFLDANGHSDISLADSYAKDNKVEA 239
VKMGGKDVIY KQQHSS LQ D+QKRLKE++D+RF++A+ + ++ +KVE
Sbjct: 180 SVKMGGKDVIYAKQQHSSKLQPEDLQKRLKEVADKRFVEASVVHNTG-SERVQASSKVET 238
Query: 240 REQRLRFVESNPLNSYSSNEELVMMPKRRGGRDKDIISHSEWLNTVQAEPDVISMSFIPI 299
+EQRLRF +++ L SY++ E+ V M KRRGG D + H+EWL TVQ EPDVISMSFIPI
Sbjct: 239 KEQRLRFADTSSLGSYANKEDYVFMCKRRGGNDNRNLMHNEWLQTVQMEPDVISMSFIPI 298
Query: 300 TSLLNGVPGCGFLNHAINLYLRYKPRVEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSS 359
TSLLNGVPG GFL+HAINLYLRYKP +EELHQFLEFQLPRQWAPV+S+LPLGPQRK+QS
Sbjct: 299 TSLLNGVPGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLGPQRKQQSC 358
Query: 360 ASLPVNLIGPKLYVCTNMVDVGKRPVTGLRLFLEGQKSNKLAIHLQHLCSLPQIIQLEDD 419
ASL + GPKLYV T VDVGKRP+TG+RL+LEG++SN+LAIHLQHL SLP+I QLEDD
Sbjct: 359 ASLQFSFFGPKLYVNTTPVDVGKRPITGMRLYLEGRRSNRLAIHLQHLSSLPKIYQLEDD 418
Query: 420 TYNPQTPEAEIRKYYEPIGSWKRFSHVCTAPVDSDDS-SIVTGAHLEVVSHGFKKILFLR 478
E+ R+YYE + +WK +SHVCT PV+SDD S+VTGA L V SHGFK +LFLR
Sbjct: 419 LNRSIRQESHDRRYYEKV-NWKNYSHVCTEPVESDDDLSVVTGAQLHVESHGFKNVLFLR 477
Query: 479 LHFSKVCNATSVKNPEWDGSPNLGQKSGLISTLISTHFSTAALKPAPRPAEVNINSAVYP 538
L FS+V AT VKN EWD + KSGLISTLIS HF TAA KP PRPA+VNINSA+YP
Sbjct: 478 LCFSRVVGATLVKNSEWDEAVGFAPKSGLISTLISHHF-TAAQKPPPRPADVNINSAIYP 536
Query: 539 GGPPVPVQTPKLLRFVDTTEMLRGPQDLPGYWVVSGAKLHLERGKISLRVKYSLLT 594
GGPPVP Q PKLL+FVDT+EM RGPQ+ PGYWVVSGA+L +E+GKISL+VKYSL T
Sbjct: 537 GGPPVPTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVEKGKISLKVKYSLFT 592
>AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613
Length = 612
Score = 600 bits (1548), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/608 (53%), Positives = 422/608 (69%), Gaps = 26/608 (4%)
Query: 8 QSVSESAIRSIGLGYDIANDIRLKNCKQRGSPD-PLLIELDHDKVQDIVLPGNLTVTGVS 66
S +E A+ IGLGYD+ +D+R CK +PD L+E+D + +D++ PG + V VS
Sbjct: 12 HSAAEKAVSVIGLGYDLCSDVRFSACKT--TPDGSRLVEIDPTRNRDLIFPGGIVVNNVS 69
Query: 67 KSIKCDKGERMRFRSDVLSFQQMSEQFNRELSLSGKIPSGFFNAMFEFTGCWQKDASITK 126
SIKCDKGER R RSD+LSF QMSE+FN+++ LSGKIPSG FN MF F+ CW KDAS K
Sbjct: 70 SSIKCDKGERTRLRSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAFSKCWPKDASSVK 129
Query: 127 SLAFDGWCITLYTVALSKAHIILKDHVKQAVPSTWEPAALARFIKKFGTHIVVGVKMGGK 186
+LA+DGW I+LY+V + + + L+D VK+ VPS+W+ AALA FI+K+GTH+VVGV MGGK
Sbjct: 130 TLAYDGWFISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGK 189
Query: 187 DVIYLKQQHSSSLQAVDVQKRLKEMSDQRFLDANGHSDISLADSYA----KDNKVEAREQ 242
DVI++KQ S+ + ++QK LK D+RF S S A Y+ ++N ++ Q
Sbjct: 190 DVIHVKQMRKSNHEPEEIQKMLKHWGDERFCVDPVESK-SPASVYSGKPKEENLLQWGLQ 248
Query: 243 RLRFVESNPLNSYSSNEELVMMPKRRGGRDKDIISHSEWLNTVQAEPDVISMSFIPITSL 302
S+ + ++ NEE++ + RRGG D SH WL+TV P+VISM F+PITSL
Sbjct: 249 PFGTSVSSAVVMHTKNEEIMRVCIRRGGVDLG-QSHERWLSTVSQAPNVISMCFVPITSL 307
Query: 303 LNGVPGCGFLNHAINLYLRYKPRVEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSSASL 362
L+G+PG GFL+HA+NLYLRYKP +EELHQFLEFQLPRQWAPVY DLPLG +R +QSS SL
Sbjct: 308 LSGLPGTGFLSHAVNLYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLGLRRSKQSSPSL 367
Query: 363 PVNLIGPKLYVCTNMVDVGKRPVTGLRLFLEGQKSNKLAIHLQHLCSLPQIIQL-EDDTY 421
+L+GPKLYV T+ VD G+RPVTGLR FLEG+K N LAIHLQHL + P + L DDTY
Sbjct: 368 QFSLMGPKLYVNTSKVDSGERPVTGLRFFLEGKKGNHLAIHLQHLSACPPSLHLSHDDTY 427
Query: 422 NPQTPEAEIRKYYEPIGSWKRFSHVCTAPVD-----SDDS-SIVTGAHLEVVSHGFKKIL 475
P E + YY P+ W FSHVCT PV SDD+ SIVT A LEV G +K+L
Sbjct: 428 EPIEEPVE-KGYYVPV-KWGIFSHVCTYPVQYNGARSDDTASIVTKAWLEVKGMGMRKVL 485
Query: 476 FLRLHFSKVCNATSVKNPEWDGSPNLGQKSGLISTLISTHFSTAALKPAP---RP-AEVN 531
FLRL FS +A + K+ WD +KSG+ S +IST ST L P P +P ++++
Sbjct: 486 FLRLGFSLDASAVTRKSC-WDNLSTNSRKSGVFS-MISTRLST-GLSPNPATTKPQSKID 542
Query: 532 INSAVYPGGPPVPVQTPKLLRFVDTTEMLRGPQDLPGYWVVSGAKLHLERGKISLRVKYS 591
INSAVYP GP PV+ PKLL VDT E++RGP++ PGYWVV+GAKL +E GKIS++ KYS
Sbjct: 543 INSAVYPRGPSPPVK-PKLLSLVDTKEVMRGPEEQPGYWVVTGAKLCVEAGKISIKAKYS 601
Query: 592 LLTVNSPD 599
LLTV S D
Sbjct: 602 LLTVISED 609
>AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628
Length = 627
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/614 (41%), Positives = 366/614 (59%), Gaps = 33/614 (5%)
Query: 10 VSESAIRSIGLGYDIANDIRLKNCKQR--GSPDPLLIELDHDKVQDIVLPGNLTVTGVSK 67
V E+A++S+G G+D+ D RLK CK + D L+ LD + +++ +PG VS
Sbjct: 8 VIETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVFQNVSA 67
Query: 68 SIKCDKGERMRFRSDVLSFQQMSEQFNRELSLSGKIPSGFFNAMFEF-TGCWQKDASITK 126
I CDKGER RFRSD+L F +MSE FN+ S++GKIPSG FNA F F +G W DA+ K
Sbjct: 68 DINCDKGERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANVK 127
Query: 127 SLAFDGWCITLYTVALSKAHII-LKDHVKQAVPSTWEPAALARFIKKFGTHIVVGVKMGG 185
SL D +TL+ + + + + L D V+ AVPS+W+P LARFI+++GTH++ GV +GG
Sbjct: 128 SLGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVGG 187
Query: 186 KDVIYLKQQHSSSLQAVDVQKRLKEMSDQRFLDANGHSDISLADSYAKDNKVEAREQRLR 245
+DV+ ++Q SS L ++ L ++ DQ F + S L +Y + +
Sbjct: 188 QDVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHSHSQPKFPEAFN 247
Query: 246 FVESN---PLNSYSSNEE--LVMMPKRRGGRDKDIISHSEWLNTVQAEPDVISMSFIPIT 300
+ N++S N + + ++ +RGG D SHSEWL TV +PD I+ +FIPIT
Sbjct: 248 VFDDKQTVAFNNFSINSQNGITVICAKRGG-DGRAKSHSEWLITVPDKPDAINFNFIPIT 306
Query: 301 SLLNGVPGCGFLNHAINLYLRYKPRVEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSS- 359
SLL VPG G L+HA++LYLRYKP + +L FL+F PR WAPV++DLP G S+
Sbjct: 307 SLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHNDLPFGAAPNMASAY 366
Query: 360 ASLPVNLIGPKLYVCTNMVDVGKRPVTGLRLFLEGQKSNKLAIHLQHLCSLPQIIQ---L 416
+L +N +GPKLYV T V K PVTG+R FLEG+K N+LAIHLQHL + +
Sbjct: 367 PALHINFMGPKLYVNTTPVTSEKNPVTGMRFFLEGKKCNRLAIHLQHLDNTRTTVGEKIT 426
Query: 417 EDDTYNPQTPEAEIRKYYEPIGSWKRFSHVCTAPV---------------DSDDSSIVTG 461
++ + + +Y+EP+ K+FSHVCT PV +D + IVTG
Sbjct: 427 DEHIWRGSDQITDNDRYFEPLNG-KKFSHVCTVPVKYDPNWIKTTSNHKSQNDVAFIVTG 485
Query: 462 AHLEVVSHGFKKILFLRLHFSKVCNATSVKNPEWDGSPNLGQKSGLISTLIS--THFSTA 519
A LEV HG K +L LRL ++KV + V+N G QKSG+ S++ T S
Sbjct: 486 AQLEVKKHGSKSVLHLRLRYTKVSDHYVVQNSWVHGPIGTSQKSGIFSSMSMPLTSGSVH 545
Query: 520 ALKPAPRPAEVNINSAVYPGGPPVPVQTPKLLRFVDTTEMLRGPQDLPGYWVVSGAKLHL 579
EV ++S V+PGGPPVP K+++FVD +++ RGPQ PG+W+V+G +L+L
Sbjct: 546 HNMIQKDKNEVVLDSGVFPGGPPVPANN-KIVKFVDLSQLCRGPQHSPGHWLVTGVRLYL 604
Query: 580 ERGKISLRVKYSLL 593
++GK+ L VK++LL
Sbjct: 605 DKGKLCLHVKFALL 618
>AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562
Length = 561
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/608 (40%), Positives = 352/608 (57%), Gaps = 86/608 (14%)
Query: 7 LQSVSESAIRSIGLGYDIANDIRLKNCKQRGSPDPLLIELDHDKVQDIVLPGNLTVTGVS 66
L + +AI+++G G+D+ +D+RL CK G+P L+ ++ + +D+ L + V
Sbjct: 17 LTTTLRNAIQALGRGFDVTSDVRLLYCK--GAPGSRLVRIEEGQNRDLELSHGFLLPNVP 74
Query: 67 KSIKCDKGERMRFRSDVLSFQQMSEQFNRELSLSGKIPSGFFNAMFEFTGCWQKDASITK 126
I C +G R V SF +M+E+FN + G IP G FNAMF +TG WQ DA+ TK
Sbjct: 75 ADIDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTK 134
Query: 127 SLAFDGWCITLYTVALSKAHIILKDHVKQAVPSTWEPAALARFIKKFGTHIVVGVKMGGK 186
SLA G+ I LY V L+K ++L + +++AVPS+W+PA+LA FI+ +GTHIV V +GG+
Sbjct: 135 SLALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGR 194
Query: 187 DVIYLKQQHSSSLQAVDVQKRLKEMSDQRFLDANGHSDISLADSYAKDNKVEAREQRLRF 246
DV+Y++Q SS L +++ + +M RF +A S
Sbjct: 195 DVVYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSI---------------------- 232
Query: 247 VESNPLNSYSSNEELVMMPKRRGGRDKDIISHSEWLNTVQAEPDVISMSFIPITSLLNGV 306
+ PL ++++ ++ +RRGG D + SH+ W TV A PD+I+M+F PI SLL GV
Sbjct: 233 --TGPLKY--KDKDITVIFRRRGGDDLEQ-SHARWAETVPAAPDIINMTFTPIVSLLEGV 287
Query: 307 PGCGFLNHAINLYLRYKPRVEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSSASLPVNL 366
PG L AI LYL YKP +E+L FL++Q+ R WAP S+L QRK +SL +L
Sbjct: 288 PGLRHLTRAIELYLEYKPPIEDLQYFLDYQIARAWAPEQSNL----QRKEPVCSSLQFSL 343
Query: 367 IGPKLYVCTNMVDVGKRPVTGLRLFLEGQKSNKLAIHLQHLCSLPQIIQLEDDTYNP--- 423
+GPKL++ + V VG++PVTGLRL LEG K N+L+IHLQHL SLP+I+Q D++ P
Sbjct: 344 MGPKLFISADQVTVGRKPVTGLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWDSHVPIGA 403
Query: 424 ---QTPEAEIRKYYEPIGSWKRFSHVCTAPVDSDDSSI--------VTGAHLEVVSHGFK 472
Q PE + +++EPI WK FSHV T+P++ ++ I VTGA L V G K
Sbjct: 404 PKWQGPEEQDSRWFEPI-KWKNFSHVSTSPIEHTETHIGDLSGVHIVTGAQLGVWDFGSK 462
Query: 473 KILFLRLHFSKVCNATSVKNPEWDGSPNLGQKSGLISTLISTHFSTAALKPAPRPAEVNI 532
+L L+L FSKV T ++ WD +P V
Sbjct: 463 NVLHLKLLFSKVPGCT-IRRSVWDHTP------------------------------VAS 491
Query: 533 NSAVYPGGPPVPV-------QTPKLLRFVDTTEMLRGPQDLPGYWVVSGAKLHLERGKIS 585
+ + PGGP Q+ KL + VD++EML+GPQDLPG+W+V+GAKL +E+GKI
Sbjct: 492 SGRLEPGGPSTSSSTEEVSGQSGKLAKIVDSSEMLKGPQDLPGHWLVTGAKLGVEKGKIV 551
Query: 586 LRVKYSLL 593
LRVKYSLL
Sbjct: 552 LRVKYSLL 559
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,972,520
Number of extensions: 629056
Number of successful extensions: 1559
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1533
Number of HSP's successfully gapped: 4
Length of query: 608
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 504
Effective length of database: 8,255,305
Effective search space: 4160673720
Effective search space used: 4160673720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)