BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0958100 Os01g0958100|AK103090
(347 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45770.2 | chr2:18851248-18853402 FORWARD LENGTH=374 514 e-146
AT5G03940.1 | chr5:1060265-1063257 REVERSE LENGTH=565 159 3e-39
AT1G15310.1 | chr1:5269173-5271947 REVERSE LENGTH=480 136 2e-32
AT1G48900.1 | chr1:18084972-18087743 REVERSE LENGTH=496 130 1e-30
AT5G49500.1 | chr5:20077556-20080206 REVERSE LENGTH=498 115 3e-26
AT4G30600.1 | chr4:14938142-14940600 REVERSE LENGTH=635 99 4e-21
>AT2G45770.2 | chr2:18851248-18853402 FORWARD LENGTH=374
Length = 373
Score = 514 bits (1325), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/329 (77%), Positives = 287/329 (87%), Gaps = 7/329 (2%)
Query: 25 GQAGFFTRLGRLIQEKAKSDVEKLFSGFSKTRESLSVVDELLTYWNLADTDRVLDELEEA 84
G +GFFTRLGRLI+EKAKSDVEK+FSGFSKTRE+L+V+DELL +WNLA+TDRVLDELEEA
Sbjct: 44 GPSGFFTRLGRLIKEKAKSDVEKVFSGFSKTRENLAVIDELLLFWNLAETDRVLDELEEA 103
Query: 85 LLVSDFGPKISFRIVDTLREEIRDGKLKSGAEIKEALKRCILELLTSKGGNPELQLGFRK 144
LLVSDFGPKI+ RIV+ LRE+I GKLKSG+EIK+ALK +LE+L K ELQLGFRK
Sbjct: 104 LLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNSKTELQLGFRK 163
Query: 145 PAVIMIVGVNGGGKTTSL-------GKLAYRFKNEGVKVLMAAGDTFRAAARDQLEVWAE 197
PAVIMIVGVNGGGKTTSL GKLA+R KNEG KVLMAAGDTFRAAA DQLE+WAE
Sbjct: 164 PAVIMIVGVNGGGKTTSLDSGFCFSGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAE 223
Query: 198 RTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVI 257
RTG EIV+ KAK A+VLS+AVKRGK EG+D+VLCDTSGRLHTNY LMEEL++CKK +
Sbjct: 224 RTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAV 283
Query: 258 AKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGGCVVSVVDEL 317
K + GAPNEILLVLDG TGLNML QAREFN+VVG+TG +LTKLDG+ARGGCVVSVV+EL
Sbjct: 284 GKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEEL 343
Query: 318 GIPVKFIGVGEGMEDLQPFDAEAFVEAIF 346
GIPVKFIGVGE +EDLQPFD EAFV AIF
Sbjct: 344 GIPVKFIGVGEAVEDLQPFDPEAFVNAIF 372
>AT5G03940.1 | chr5:1060265-1063257 REVERSE LENGTH=565
Length = 564
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 150/276 (54%), Gaps = 12/276 (4%)
Query: 63 DELLTYWNLADTDRVLDELEEALLVSDFGPKISFRIVDTLREEIRDGKLKSGAEIKEALK 122
+E+LT N+A+ R ++ ALL +D + R V ++ ++ + G + + L
Sbjct: 95 EEVLTKDNIAEPMR---DIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLV 151
Query: 123 RCIL-ELLTSKGGN-PELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAA 180
+ + EL+ GG ELQ P VI++ G+ G GKTT KLA K +G ++ A
Sbjct: 152 KIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIA 211
Query: 181 GDTFRAAARDQLEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRL 240
GD +R AA DQL + E+ G + KPA + Q +K K+ D+V+ DT+GRL
Sbjct: 212 GDVYRPAAIDQLVILGEQVGVPVYTAGTD-VKPADIAKQGLKEAKKNNVDVVIMDTAGRL 270
Query: 241 HTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTK 300
+ G+M+EL KK + P E+LLV+D TG FN +G+TG +LTK
Sbjct: 271 QIDKGMMDELKDVKKFLN------PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTK 324
Query: 301 LDGTARGGCVVSVVDELGIPVKFIGVGEGMEDLQPF 336
LDG +RGG +SV + G P+K +G GE MEDL+PF
Sbjct: 325 LDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 360
>AT1G15310.1 | chr1:5269173-5271947 REVERSE LENGTH=480
Length = 479
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 17/271 (6%)
Query: 78 LDELEEALLVSDFGPKISFRIVDTLREEIRD----GKLKSGAEIKEALKRCILELLTS-- 131
L+E+ ALL SD +SF +V+ ++ I+ L +G + +++ I + L
Sbjct: 32 LNEITRALLQSD----VSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRML 87
Query: 132 KGGNPELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAARDQ 191
G P KP+V+M VG+ G GKTT+ K AY + +G K + DTFRA A DQ
Sbjct: 88 DPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQ 147
Query: 192 LEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLMEELV 251
L+ A + + ++ P + + V R K+E DL++ DTSGR L EE+
Sbjct: 148 LKQNATKAKIPFY-GSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEM- 205
Query: 252 SCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGGCVV 311
+ +A+A P+ ++ V+D + G +QA F + V V ++TK+DG A+GG +
Sbjct: 206 ---RQVAEAT--EPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGAL 260
Query: 312 SVVDELGIPVKFIGVGEGMEDLQPFDAEAFV 342
S V PV FIG GE M++ + FD + FV
Sbjct: 261 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 291
>AT1G48900.1 | chr1:18084972-18087743 REVERSE LENGTH=496
Length = 495
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 17/274 (6%)
Query: 75 DRVLDELEEALLVSDFGPKISFRIVDTLREEIRD----GKLKSGAEIKEALKRCILELLT 130
+ L+E+ ALL SD +SF +V ++ I+ L +G + +++ I L
Sbjct: 29 NECLNEITRALLQSD----VSFPLVKEMQSNIKKIVNLEDLAAGHNKRRIIEQAIFSELC 84
Query: 131 S--KGGNPELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAA 188
G P K +V+M VG+ G GKTT+ K AY + +G K + DTFRA A
Sbjct: 85 KMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGA 144
Query: 189 RDQLEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLME 248
DQL+ A + + ++ P + + V K+E DL++ DTSGR L E
Sbjct: 145 FDQLKQNATKAKIPFY-GSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFE 203
Query: 249 ELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGG 308
E+ + +A+A P+ ++ V+D + G QA+ F V V ++TK+DG A+GG
Sbjct: 204 EM----RQVAEAT--KPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGG 257
Query: 309 CVVSVVDELGIPVKFIGVGEGMEDLQPFDAEAFV 342
+S V PV FIG GE M++ + FD + FV
Sbjct: 258 GALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 291
>AT5G49500.1 | chr5:20077556-20080206 REVERSE LENGTH=498
Length = 497
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 21/278 (7%)
Query: 78 LDELEEALLVSDFGPKISFRIVDTLREEIRD----GKLKSGAEIKEALKRCILELLTS-- 131
L+E+ ALL SD +SF +V ++ I+ L +G + +++ I L
Sbjct: 32 LNEITRALLQSD----VSFPLVKEMQTNIKKIVNLEDLAAGHNKRRIIEQAIFSELCKML 87
Query: 132 KGGNPELQLGFRKPAVIMIVGVNGG--GKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAAR 189
G KP+V+M VG+ G K + + + +G K + DTFRA A
Sbjct: 88 DPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLVPSMLIIIRRKGYKPALVCADTFRAGAF 147
Query: 190 DQLEVWAERTGSEI-VIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLME 248
DQL+ A T S+I + + P + + V R K+E DL++ DTSGR L E
Sbjct: 148 DQLKQNA--TKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFE 205
Query: 249 ELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGG 308
E+ + I++A P+ ++ V+D + G +QAR F V V ++TK+DG A+GG
Sbjct: 206 EM----RQISEAT--KPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGG 259
Query: 309 CVVSVVDELGIPVKFIGVGEGMEDLQPFDAEAFVEAIF 346
+S V PV FIG GE M++ + FDA+ FV +
Sbjct: 260 GTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLL 297
>AT4G30600.1 | chr4:14938142-14940600 REVERSE LENGTH=635
Length = 634
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 29/309 (9%)
Query: 60 SVVDELLTYWNLADTD--RVLDELEEALLVSDFGPKISFRIVDTLREEIRDGKLKS---- 113
SV + NL TD L L+E L+ + +I+ ++ +++ + KL S
Sbjct: 332 SVFQSITGKANLERTDLGPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLSSFTRI 391
Query: 114 GAEIKEALKRCILELLTSKGG-----NPELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYR 168
+ ++ A++ ++ +LT + + RKP V++ VGVNG GK+T+L K+AY
Sbjct: 392 SSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 451
Query: 169 FKNEGVKVLMAAGDTFRAAARDQLEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREG 228
+ V V+MAA DTFR+ A +QL A R I + + PA V +A++ R G
Sbjct: 452 LQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPI-FEKGYEKDPAVVAKEAIQEATRNG 510
Query: 229 FDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFN 288
D+VL DT+GR+ N LM L + P+ +L V + G + + Q +FN
Sbjct: 511 SDVVLVDTAGRMQDNEPLMRALSKLINL------NQPDLVLFVGEALVGNDAVDQLSKFN 564
Query: 289 DVVG----------VTGFVLTKLDGT-ARGGCVVSVVDELGIPVKFIGVGEGMEDLQPFD 337
+ + G +LTK D + G +S+V G PV F+G G+ DL+ +
Sbjct: 565 QKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLN 624
Query: 338 AEAFVEAIF 346
+A V+ +
Sbjct: 625 VKAIVKTLL 633
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.138 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,851,006
Number of extensions: 294295
Number of successful extensions: 1034
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1024
Number of HSP's successfully gapped: 6
Length of query: 347
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 248
Effective length of database: 8,392,385
Effective search space: 2081311480
Effective search space used: 2081311480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)