BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0948500 Os01g0948500|AK119342
(672 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76390.1 | chr1:28655914-28658531 FORWARD LENGTH=812 153 4e-37
AT1G20780.1 | chr1:7217812-7220609 FORWARD LENGTH=802 137 2e-32
AT1G68940.3 | chr1:25921453-25925374 REVERSE LENGTH=1062 125 7e-29
AT2G23140.1 | chr2:9845696-9849105 REVERSE LENGTH=830 60 3e-09
AT5G67340.1 | chr5:26864996-26867450 FORWARD LENGTH=708 59 9e-09
AT4G16490.1 | chr4:9293891-9295530 REVERSE LENGTH=473 55 1e-07
AT3G01400.1 | chr3:151920-152987 FORWARD LENGTH=356 51 2e-06
>AT1G76390.1 | chr1:28655914-28658531 FORWARD LENGTH=812
Length = 811
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 166/630 (26%), Positives = 295/630 (46%), Gaps = 43/630 (6%)
Query: 85 ESKERLASIEALSSIVRSLSRDVDETREA-IALLLDLSDIPQVRQRIGRIKGSIVMLVTL 143
ESK +A + + +IV+ LS++ + REA +++L +LS + ++IG I G+I++LV L
Sbjct: 179 ESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGL 238
Query: 144 RNAHEPG--THDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAIS 201
++ T + A+K L L + +NV MA G +PL+ L EGS K+ MA +
Sbjct: 239 TSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLG 298
Query: 202 KMFLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHXXXXXXXXXXXXXQNAEILINSGITG 261
+ L+ +K + + L+++ ++ ++ + +A++LIN+GI
Sbjct: 299 VLALNNDVKVIVAQTVG-SSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILP 357
Query: 262 PLLQLLFSV--TSVLMTLREPASAILAAIAQ------------SERILLHKDVAPQMLSL 307
PL++ LF V + + L+E ++ ILA I + L+ +++ +L L
Sbjct: 358 PLIKDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQL 417
Query: 308 LNLSSPVIQLHLLRALNSISGHTNAK-RARAKIRQNGGVQLLLPFL-TEKNIDIKIAALN 365
+ + P IQ LL L ++ N+ + IR + + L+ F+ +N D+++A++
Sbjct: 418 TSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIK 477
Query: 366 FISNLSKDASQELAEQIRDT--HLNIFVKIIS--SPTSGNEKAAAIGILSNLPVTDKKIX 421
+ N+S S+ELA +R T L V IIS +PT E+AAA G+L+ LP D +
Sbjct: 478 LLHNISPHMSEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLT 537
Query: 422 XXXXXXXXXXXXXXXXEINITAPLTPLR--TSLLEGIAGVLIRFTVPWDKKLQ-SLAVGH 478
+ +R + LEG+ +L R T K+ +L
Sbjct: 538 MRLLREGAFEKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCE 597
Query: 479 GVVPCLVKLLSEGSIKAKSKXXXXXXXXXXXXXXXRKTKLPRW----LCVA--------P 526
+P L L + + + + TK+P CV+ P
Sbjct: 598 KNLPSLFLDLLQSNSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPP 657
Query: 527 SAETYCLVHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLMQDEI-WE 585
C +H C+V+ +FCLV+ AV L+ +L+ +N + G L AL+TL++D +
Sbjct: 658 VVLGICKIHQGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVV 717
Query: 586 NGSKVIEKASGVHALLRI-AEAGNSTSQEKAIWMLERIFRLEAHRERYGE--IAQALLID 642
G ++I++A G+ +L + E + +A+WM+ERI R+E GE A L+D
Sbjct: 718 QGVRLIDEADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVD 777
Query: 643 LAQKGDPILKPMIGKILAHLELLQTQSSYF 672
Q D + + K L H++ + S F
Sbjct: 778 AFQNADFRTRQIAEKALRHIDKIPNFSGIF 807
>AT1G20780.1 | chr1:7217812-7220609 FORWARD LENGTH=802
Length = 801
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 162/623 (26%), Positives = 296/623 (47%), Gaps = 37/623 (5%)
Query: 85 ESKERLASIEALSSIVRSLSRDVDETREA-IALLLDLSDIPQVRQRIGRIKGSIVMLVTL 143
ESK +A + + ++V+ LS + + REA ++LL +LS + ++IG I G++++LV L
Sbjct: 177 ESKAIVAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGL 236
Query: 144 --RNAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAIS 201
N+ + A++ L + + + V MA G +PL+ L EGS K+ MA+ +
Sbjct: 237 TSSNSENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLG 296
Query: 202 KMFLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHXXXXXXXXXXXXXQNAEILINSGITG 261
++ L+ +K + + LV++ +SG++ + +A++LI+ GI
Sbjct: 297 ELPLNNDVKVLVAQTVG-SSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILP 355
Query: 262 PLLQLLFSV--TSVLMTLREPASAILAAIAQ-----SERILLHKDVAPQMLSLLNLSSPV 314
PL++ LF V ++ + L+E ++ ILA I + L+ ++ +L L++ + P
Sbjct: 356 PLIKDLFYVGPNNLPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPA 415
Query: 315 IQLHLLRALNSI-SGHTNAKRARAKIRQNGGVQLLLPFL-TEKNIDIKIAALNFISNLSK 372
IQ LL L + S + I+ +G + L+ F+ +N D+++A++ + NLS
Sbjct: 416 IQCKLLEVLVGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSP 475
Query: 373 DASQELAEQIRDT--HLNIFVKIISSPTS-GNEKAAAIGILSNLPVTDKKIXXXXXXXXX 429
S+ELA+ + T L V IIS T E+AAA G+L+ LP D +
Sbjct: 476 FMSEELAKALCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGA 535
Query: 430 XXXXXXXXEINITAPLTPLR--TSLLEGIAGVLIRFTVPWDKKLQSLAVG--HGVVPCLV 485
+ +R LEG+ +L R T ++K+ +++ H V +
Sbjct: 536 FEKIISKVFGIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFL 595
Query: 486 KLLSEGSIKAKSKXXXXXXXXXXXXXXXRKTKLPR----------WLCVAPS--AETYCL 533
LL + + + T++P + CV C
Sbjct: 596 HLLQSNG-QDNIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCK 654
Query: 534 VHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLMQDEI-WENGSKVIE 592
+H C+++ TFCLV+ GAV L+ +L+ +N + A L AL++L++D + E G K+++
Sbjct: 655 IHQGICSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILD 714
Query: 593 KASGVHALLRIAEAGNSTS-QEKAIWMLERIFRLE-AHRERYGEIA-QALLIDLAQKGDP 649
+A G+ +L + + +A+WM+ERI R+E RE E + A L+D Q D
Sbjct: 715 EADGIRHILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADF 774
Query: 650 ILKPMIGKILAHLELLQTQSSYF 672
+ + L H++ + SS F
Sbjct: 775 RTRQIAENALKHIDKIPNFSSIF 797
>AT1G68940.3 | chr1:25921453-25925374 REVERSE LENGTH=1062
Length = 1061
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 143/600 (23%), Positives = 262/600 (43%), Gaps = 53/600 (8%)
Query: 85 ESKERLASIEALSSIVRSLSRDVDETREAI-ALLLDLSDIPQVRQRIGRIKGSIVMLVTL 143
+ KE + +S +++ L R A ALLL+LS ++IG +G+I+MLVT
Sbjct: 399 DGKEMIVKTITMSCVIKLLGSSHQPVRHAAQALLLELSKSQHACEKIGTARGAILMLVTA 458
Query: 144 RNAHEPGTH--DDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAIS 201
+ E + + ++++L L P+N+ MAE+G PL+ +L EGS+ ++ MA +
Sbjct: 459 KYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLV 518
Query: 202 KMFLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHXXXXXXXXXXXXXQNAEILINSGITG 261
++ + K+ + E A L+ + +S N++A+ N +IL+ GI
Sbjct: 519 EIDIGHEKKTYVAEK-ACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIK 577
Query: 262 PLLQLLFS--VTSVLMTLREPASAILAAIAQSE------------RILLHKDVAPQMLSL 307
+++ +F+ V S LM R A+ ILA I +S L ++ +
Sbjct: 578 IMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHM 637
Query: 308 LNLSSPV-IQLHLLRALNSISGHTNAKRARAKI----RQNGGVQLLLPFLTEKNIDIKIA 362
L SSP + + L+R L S+S + RA A I ++ ++ + + ++ +
Sbjct: 638 LKNSSPDDLNIDLIRILLSLS---KSPRAMATIVSVIKETDASFAMIELINNPHDELGVG 694
Query: 363 ALNFISNLSKDASQELAEQIRDTHLNIFVKIISSPTSGNE----KAAAIGILSNLPVTDK 418
AL + L+ L+E++ T +I P N+ A + +L+ LP +
Sbjct: 695 ALKLLIALTPYIGHTLSERLCKTRGQP-ENLIQCPVEANQITEKHAVSAKLLAKLPHQNL 753
Query: 419 KIXXXXXXXXXXXXXXXXXEI--NITAPLTPLRTSLLEGIAGVLIRFTVP-WDKKLQSLA 475
+ + A + T LEG+ G+L+RFT ++ ++ LA
Sbjct: 754 TLNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTTTLYEPQMMYLA 813
Query: 476 VGHGVVPCLVKLLSEGSIKAKSKXXXXXXXXXXXXXXX-------RKTK------LPRWL 522
H + V LL + S + R TK +PR
Sbjct: 814 RNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSF 873
Query: 523 CVAPSAETY---CLVHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLM 579
+ S + C +H C+ K+TFCLV+A A++ L+ L+ D E + L A+ TL+
Sbjct: 874 SLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLL 933
Query: 580 QDEIW-ENGSKVIEKASGVHALLR-IAEAGNSTSQEKAIWMLERIFRLEAHRERYGEIAQ 637
D++ E ++ + + V +L + E + +KA WM+++ F + + EI+Q
Sbjct: 934 DDKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDK-FIIRGGDKYASEISQ 992
>AT2G23140.1 | chr2:9845696-9849105 REVERSE LENGTH=830
Length = 829
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 85 ESKERLASIEA-LSSIVRSL-SRDVDETREAIALLLDLSDIPQVRQRIGRIKGSIVMLVT 142
E++ L+ +E + +V L S +D R+A A L L+ + + G+IV+LV
Sbjct: 534 ETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVE 593
Query: 143 LRNAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAISK 202
L + + T ++A L LS N N +A+AG PLIH L+ GS K A +
Sbjct: 594 LLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFS 653
Query: 203 MFLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHXXXXXXXXXXXXXQNAEILINSGITGP 262
+ + E K +G+ GA+ PLV++ +G K +N +++ SG
Sbjct: 654 LSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRY 713
Query: 263 LLQLLFSVTSVLMTLREPASAILAAIA 289
L+ L+ ++ + A A+LA +A
Sbjct: 714 LIDLMDPAAGMV----DKAVAVLANLA 736
>AT5G67340.1 | chr5:26864996-26867450 FORWARD LENGTH=708
Length = 707
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 104 SRDVDETREAIALLLDLS-DIPQVRQRIGRIKGSIVMLVTLRNAHEPGTHDDAEKLLHML 162
S +D REA A + L+ + R I R + +I LV+L + + DA L L
Sbjct: 432 SSSLDTQREATARIRILARNSTDNRIVIARCE-AIPSLVSLLYSTDERIQADAVTCLLNL 490
Query: 163 SSNPQNVLLMAEAGYFRPLIHYLKEGS-DMNKILMATAISKMFLSEPMKSSLGEDGAVEP 221
S N N L+AE+G PLIH LK G + K A + + + E K+ +GE GA+EP
Sbjct: 491 SINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEP 550
Query: 222 LVEMFKSGNLEAKHXXXXXXXXXXXXXQNAEILINSGITGPLLQLL 267
LV++ SG+L K +N +I +G L++L+
Sbjct: 551 LVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM 596
>AT4G16490.1 | chr4:9293891-9295530 REVERSE LENGTH=473
Length = 472
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 135 GSIVMLVTLRNAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKI 194
G+I L+ L ++P T + A L LS + QN ++A G + L+ LK G++ +K
Sbjct: 225 GAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQ 284
Query: 195 LMATAISKMFLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHXXXXXXXXXXXXXQNAEIL 254
A A+ + L E K S+G GA+ PLV + +G+ K QN E
Sbjct: 285 NAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERA 344
Query: 255 INSGITGPLLQLL 267
+ +G PL+ L+
Sbjct: 345 VTAGAVKPLVDLV 357
>AT3G01400.1 | chr3:151920-152987 FORWARD LENGTH=356
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 85 ESKERLASIEALSSIVRSLSRDVDETRE-AIALLLDLSDIPQVRQRIGRIKGSIVMLVTL 143
E+KE +AS A+ +VR+L +E A LL LS I + + IGR G+I +LV L
Sbjct: 137 ENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGR-SGAIPLLVNL 195
Query: 144 RNAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKE-GSDMNKILMATAISK 202
DA L+ L S +N + ++G +PL+ + + GS+M + + +
Sbjct: 196 LETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNM--VDKSAFVMS 253
Query: 203 MFLSEP-MKSSLGEDGAVEPLVEMFKSGNLEAKH 235
+ +S P K ++ E+G V LVE+ + G K
Sbjct: 254 LLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKE 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 104 SRDVDETREAIALLLDLS-DIPQVRQRIGRIKGSIVMLVTLRNAHEPGTHDDAEKLLHML 162
S +DE ++A + LS + P+ R +I + G+I L++L ++ + + + L
Sbjct: 74 SYSIDEQKQAAMEIRLLSKNKPENRIKIAK-AGAIKPLISLISSSDLQLQEYGVTAILNL 132
Query: 163 SSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAISKMFLSEPMKSSLGEDGAVEPL 222
S +N +A +G +PL+ LK G+ K A A+ ++ E K ++G GA+ L
Sbjct: 133 SLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLL 192
Query: 223 VEMFKSGNLEAKHXXXXXXXXXXXXXQNAEILINSGITGPLLQLLFSVTSVLMTLREPAS 282
V + ++G AK +N + SGI PL++L+ S ++
Sbjct: 193 VNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVM 252
Query: 283 AILAAIAQSERILLHKDVAPQMLSLLNLSS 312
++L ++ +S+ ++ + P ++ ++ + +
Sbjct: 253 SLLMSVPESKPAIVEEGGVPVLVEIVEVGT 282
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,001,233
Number of extensions: 381000
Number of successful extensions: 1282
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1258
Number of HSP's successfully gapped: 15
Length of query: 672
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 567
Effective length of database: 8,227,889
Effective search space: 4665213063
Effective search space used: 4665213063
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)