BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0940100 Os01g0940100|AK107602
(357 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50460.1 | chr1:18694031-18697429 FORWARD LENGTH=499 417 e-117
AT3G20040.1 | chr3:6995317-6998064 FORWARD LENGTH=503 384 e-107
AT4G29130.1 | chr4:14352338-14354865 REVERSE LENGTH=497 326 1e-89
AT2G19860.1 | chr2:8570818-8573762 FORWARD LENGTH=503 308 3e-84
AT1G47840.1 | chr1:17616243-17618859 REVERSE LENGTH=494 288 3e-78
AT4G37840.1 | chr4:17790147-17792198 REVERSE LENGTH=494 216 2e-56
>AT1G50460.1 | chr1:18694031-18697429 FORWARD LENGTH=499
Length = 498
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/342 (59%), Positives = 256/342 (74%), Gaps = 8/342 (2%)
Query: 1 NFVALALKNFLE----GEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGR 56
NF+A +L+ F+E G D Q + L FTFSFPV+ S+SSG LI+WTKGF I + VG+
Sbjct: 145 NFLAFSLERFIEKEENGSDSQGVRRELAFTFSFPVKHTSISSGVLIKWTKGFEISEMVGQ 204
Query: 57 DVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDA 116
D+A+CL AL GL++ V ALVNDTVG L+LG+Y+D DTV AV+ G+G+NACY+ERTDA
Sbjct: 205 DIAECLQGALNRRGLDMHVAALVNDTVGALSLGYYHDPDTVVAVVFGTGSNACYLERTDA 264
Query: 117 IIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGE 176
IIKCQGLLT SG MVVNMEWGNFWSSHLPRT YDI LD E+ N ND GFEKMISGMYLG+
Sbjct: 265 IIKCQGLLTTSGSMVVNMEWGNFWSSHLPRTSYDIDLDAESSNANDMGFEKMISGMYLGD 324
Query: 177 IARLVFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIPD 236
I R V RM+++SD+FG + LS P++L T ++AI EDD+P+L EV RIL++ + + D
Sbjct: 325 IVRRVILRMSEDSDIFGPISPVLSEPYVLRTNSVSAIHEDDTPELQEVARILKD-IGVSD 383
Query: 237 APLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQ---PRRTVV 293
PLK R+LVVK+CD+VTRRA RLAAAGI GILKK+ + +RTVV
Sbjct: 384 VPLKVRKLVVKICDVVTRRAGRLAAAGIAGILKKIGRDGSGGITSGRSRSEIQMQKRTVV 443
Query: 294 AIEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
A+EGGLY Y +FREY++EALVEILGEEV++ V ++ EDGS
Sbjct: 444 AVEGGLYMNYTMFREYMEEALVEILGEEVSQYVVVKAMEDGS 485
>AT3G20040.1 | chr3:6995317-6998064 FORWARD LENGTH=503
Length = 502
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/340 (58%), Positives = 251/340 (73%), Gaps = 7/340 (2%)
Query: 1 NFVALALKNFLEGEDD-----QDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
+F+A +L+ F+E E + Q K L FTFSFPV+Q S+SSG LI+WTKGF+I + G
Sbjct: 145 DFLASSLQRFIEKEGNDFSLSQPLKRELAFTFSFPVKQTSISSGVLIKWTKGFAISEMAG 204
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
D+A+CL AL GL++RV ALVNDTVG L+ GH++D DT+AAV+ G+G+NACY+ERTD
Sbjct: 205 EDIAECLQGALNKRGLDIRVAALVNDTVGALSFGHFHDPDTIAAVVFGTGSNACYLERTD 264
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AIIKCQ T SG MVVNMEWGNFWSS LPRT YD+ LD E+ N ND GFEKMI GMYLG
Sbjct: 265 AIIKCQNPRTTSGSMVVNMEWGNFWSSRLPRTSYDLELDAESMNSNDMGFEKMIGGMYLG 324
Query: 176 EIARLVFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIP 235
+I R V RM+QESD+FG + LS PF+L T ++A+ EDD+ +L EV RIL++ L +
Sbjct: 325 DIVRRVILRMSQESDIFGPISSILSTPFVLRTNSVSAMHEDDTSELQEVARILKD-LGVS 383
Query: 236 DAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVAI 295
+ P+K R+LVVK+CD+VTRRAARLAAAGI GILKK+ RRTVVA+
Sbjct: 384 EVPMKVRKLVVKICDVVTRRAARLAAAGIAGILKKVGRDGSGGGRRSDKQIM-RRTVVAV 442
Query: 296 EGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
EGGLY Y +FREY+DEAL +ILGE+VA++V ++ EDGS
Sbjct: 443 EGGLYLNYRMFREYMDEALRDILGEDVAQHVVVKAMEDGS 482
>AT4G29130.1 | chr4:14352338-14354865 REVERSE LENGTH=497
Length = 496
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 234/353 (66%), Gaps = 13/353 (3%)
Query: 1 NFVALALKNFL--EGED---DQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
NF+A AL F+ E ED + + LGFTFSFPV+Q S+SSGSLI+WTKGFSI + VG
Sbjct: 145 NFIAEALAKFVATECEDFHLPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVG 204
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
+DV LN+AL GL++R+ ALVNDTVGTLA G YY+ D VAAVI+G+GTNA Y+ER
Sbjct: 205 QDVVGALNKALERVGLDMRIAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNAAYVERAT 264
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AI K GLL SG MV+NMEWGNF SSHLP T +D LD E+ N +Q EK+ISGMYLG
Sbjct: 265 AIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEFDHTLDFESLNPGEQILEKIISGMYLG 324
Query: 176 EIARLVFHRMAQESDVFGDAADS-LSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
EI R V +MA+++ FGD S L PFI+ TP ++A+ D SPDL V +++ L++
Sbjct: 325 EILRRVLLKMAEDAAFFGDTVPSKLRIPFIIRTPHMSAMHNDTSPDLKIVGSKIKDILEV 384
Query: 235 PDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVA 294
P LK R++V+ +C+I+ R ARL+AAGI GILKKL + +++V+A
Sbjct: 385 PTTSLKMRKVVISLCNIIATRGARLSAAGIYGILKKL-------GRDTTKDEEVQKSVIA 437
Query: 295 IEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSXXXXXXXXXXHS 347
++GGL++ Y F E ++ +L E+LG+E + +V + + DGS HS
Sbjct: 438 MDGGLFEHYTQFSECMESSLKELLGDEASGSVEVTHSNDGSGIGAALLAASHS 490
>AT2G19860.1 | chr2:8570818-8573762 FORWARD LENGTH=503
Length = 502
Score = 308 bits (789), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 228/353 (64%), Gaps = 13/353 (3%)
Query: 1 NFVALALKNFL--EGED---DQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
+F+ L F+ EGED + LGFTFSFPV+Q+S+SSG+LI WTKGFSI DTV
Sbjct: 145 DFIVDVLAKFVATEGEDFHLPPGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVD 204
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
+DV L +A+ GL++ V ALVNDT+GTLA G Y + D V AVI+G+GTNA Y+ER
Sbjct: 205 KDVVGELVKAMERVGLDMLVAALVNDTIGTLAGGRYTNPDVVVAVILGTGTNAAYVERAH 264
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AI K GLL SG MV+NMEWGNF SSHLP T YD LD ++ N +Q EK+ISGMYLG
Sbjct: 265 AIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDHSLDVDSLNPGEQILEKIISGMYLG 324
Query: 176 EIARLVFHRMAQESDVFGD-AADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
EI R V +MA+E+ FGD L PFI+ TP ++A+ D SPDL V L++ L++
Sbjct: 325 EILRRVLLKMAEEAAFFGDIVPPKLKIPFIIRTPNMSAMHSDTSPDLKVVGSKLKDILEV 384
Query: 235 PDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVA 294
+ LK R++V+ +C+I+ R ARL+AAGI GILKK+ + +++V+A
Sbjct: 385 QTSSLKMRKVVISLCNIIASRGARLSAAGIYGILKKI-------GRDATKDGEAQKSVIA 437
Query: 295 IEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSXXXXXXXXXXHS 347
++GGL++ Y F E + +L E+LG+EV+ +V + ++ DGS HS
Sbjct: 438 MDGGLFEHYTQFSESMKSSLKELLGDEVSESVEVILSNDGSGVGAALLAASHS 490
>AT1G47840.1 | chr1:17616243-17618859 REVERSE LENGTH=494
Length = 493
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 220/341 (64%), Gaps = 17/341 (4%)
Query: 2 FVALALKNFLEGED------DQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
F+A L NF+ E ++ K LGFTFSFPV+Q S+ SG+L +WTKGF + G
Sbjct: 149 FIASKLANFVAKEKPGRFLLEEGRKRELGFTFSFPVKQTSIDSGTLSKWTKGFKVSGMEG 208
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
++V CLNEA+ GL++RV+ALVND VGTLA Y+DED + VI+G+GTNACY+E+
Sbjct: 209 KNVVACLNEAMEAHGLDMRVSALVNDGVGTLAGARYWDEDVMVGVILGTGTNACYVEQKH 268
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AI K + ++SG ++N EWG F S LP+T +D+ +D+ + N + +EKMISGMYLG
Sbjct: 269 AIPKLRS-KSSSGTTIINTEWGGF-SKILPQTIFDLEMDETSLNPGEHLYEKMISGMYLG 326
Query: 176 EIARLVFHRMAQESDVFGDAADS-LSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
EI R V M + SD+FG A + LS P L T L ++ED++ DL +V IL + L +
Sbjct: 327 EIVRRVLLHMCETSDLFGHFAPAKLSTPLALRTEHLCKMQEDNTDDLRDVGSILYDFLDV 386
Query: 235 PDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVA 294
+A + RR VV+VCD V +R RLA AGIV IL+K+ +RTVVA
Sbjct: 387 -EANMNARRRVVEVCDTVVKRGGRLAGAGIVAILEKI-------EKDTKRMGSGKRTVVA 438
Query: 295 IEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
++G LY+ YP +R+Y+ +ALVE+LG ++A +V ++ T+D S
Sbjct: 439 MDGALYEKYPQYRQYMQDALVELLGHKLASHVAIKHTKDVS 479
>AT4G37840.1 | chr4:17790147-17792198 REVERSE LENGTH=494
Length = 493
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 207/344 (60%), Gaps = 25/344 (7%)
Query: 1 NFVALALKNFL------EGEDDQDGKMALGFTFSFPVRQI-SVSSGSLIRWTKGFSIRDT 53
+F++L L FL E E+ ++ LGFT + V QI S S S+ R + +
Sbjct: 146 DFISLELVKFLAMNPGGEAEEVKN----LGFTLTRSVEQIGSHSISSIHRKSLANDDDEK 201
Query: 54 VGRDVAQCLNEALANCGLNVRV-TALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIE 112
V +D+ +NE+L GL +R+ TALV++T+G LA G YY +DTVAAV +G GTNA YIE
Sbjct: 202 VLKDLVNDMNESLETHGLKIRMNTALVDNTIGELAGGRYYHKDTVAAVSLGMGTNAAYIE 261
Query: 113 RTDAIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGM 172
+ I + + + +VV+ EWG+F S HLP T +D LD E+ N + FEKM+SG
Sbjct: 262 QAQEISRWKSAIREPQEIVVSTEWGDFRSCHLPITEFDASLDAESLNPGHRIFEKMVSGR 321
Query: 173 YLGEIARLVFHRMAQESDVFGDA-ADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREH 231
YLGEI R V +M++ES +FGD L+ P+IL +P +AA+ +D S + V + L+E
Sbjct: 322 YLGEIVRRVLLKMSEESALFGDTLPPKLTIPYILWSPDMAAMHQDISEERETVNKKLKEV 381
Query: 232 LKIPDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRT 291
I D+ L R +VV+VCD+V RAARLA AGIVG++KKL + + +
Sbjct: 382 FGIMDSTLAAREVVVEVCDVVAERAARLAGAGIVGMIKKL------------GRLEKKMS 429
Query: 292 VVAIEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
+V +EGGLY Y VFR YL ++ E+LG+E++ +V + + GS
Sbjct: 430 IVIVEGGLYDHYRVFRNYLHSSVWEMLGDELSDHVVIEHSHGGS 473
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,056,581
Number of extensions: 278572
Number of successful extensions: 676
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 660
Number of HSP's successfully gapped: 6
Length of query: 357
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 257
Effective length of database: 8,364,969
Effective search space: 2149797033
Effective search space used: 2149797033
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)