BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0928700 Os01g0928700|Os01g0928700
(497 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23670.1 | chr5:7981889-7985037 FORWARD LENGTH=490 810 0.0
AT3G48780.1 | chr3:18089346-18092276 FORWARD LENGTH=490 783 0.0
AT3G48790.1 | chr3:18093404-18095181 FORWARD LENGTH=351 514 e-146
AT4G36480.1 | chr4:17218598-17221124 FORWARD LENGTH=483 142 6e-34
AT5G04620.2 | chr5:1327292-1329934 FORWARD LENGTH=477 102 4e-22
>AT5G23670.1 | chr5:7981889-7985037 FORWARD LENGTH=490
Length = 489
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/496 (76%), Positives = 433/496 (87%), Gaps = 8/496 (1%)
Query: 1 MVRVPFVTAVTTVFSYGVIFGFGHLRDWFRALLRSLFSGHSPAAAGTNLKGYAPICGGQE 60
M+ +P++TAV+T FSYG++F FG LRD+FR + F+ +NL+GYAPIC G E
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFT--------SNLQGYAPICLGHE 52
Query: 61 DFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLHRTTKTSRCLNLGSYNYLG 120
DFY RR R+QDCF RPI+S PDAWFDVVERYSND+NKTL RTTKTSRCLNLGSYNYLG
Sbjct: 53 DFYIRRLYHRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLG 112
Query: 121 FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV 180
F + DEYCTPRVIESLKK+SASTCS RVD G T +H ELEE V RFVGKPAA++FGMGY
Sbjct: 113 FGSFDEYCTPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYA 172
Query: 181 TNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEEVLREQIAGGQ 240
TNSAIIP LIGKGGLIISDSLNH+SIVNGARGSGA+++VFQHN P+HLE VLREQIA GQ
Sbjct: 173 TNSAIIPVLIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQ 232
Query: 241 PRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYTYLDEAHSIGAVGKTGRGVC 300
PRTHR WKKIIV+VEGIYSMEGE+C LPE+VA+CKKYKAY YLDEAHSIGA+GKTG+G+C
Sbjct: 233 PRTHRPWKKIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGIC 292
Query: 301 ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI 360
ELLGVD ADVD+MMGTFTKSFGSCGGYIA SKE+I +LKH CPAH+YATS+ P+ QQ+I
Sbjct: 293 ELLGVDTADVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQII 352
Query: 361 SAIEVILGEDGSDRGAKKLAQIRENSNFFRSELEKMGFEVLGDNDSPVMPIMLYNPAKMP 420
SAI+VILGEDGS+RGA+KLA+IRENSNFFR+EL+KMGFEVLGDNDSPVMPIMLYNPAK+P
Sbjct: 353 SAIKVILGEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412
Query: 421 AFSRECLRQKVAIVTVSFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYL 480
AFSRECLRQKVA+V V FPATPLLLARARICISASHSREDLI+ L+VISKVGDL GIKY
Sbjct: 413 AFSRECLRQKVAVVVVGFPATPLLLARARICISASHSREDLIRALKVISKVGDLSGIKYF 472
Query: 481 PVEHEKTTSAEKLKKI 496
P E +K ++ K+
Sbjct: 473 PAEPKKIEQSKNDIKL 488
>AT3G48780.1 | chr3:18089346-18092276 FORWARD LENGTH=490
Length = 489
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/486 (75%), Positives = 420/486 (86%), Gaps = 8/486 (1%)
Query: 1 MVRVPFVTAVTTVFSYGVIFGFGHLRDWFRALLRSLFSGHSPAAAGTNLKGYAPICGGQE 60
M+ +P++TAV+T FSYG++F FG LRD+ R + + NL+GYAPIC E
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFDWWRT--------NNLQGYAPICLAHE 52
Query: 61 DFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLHRTTKTSRCLNLGSYNYLG 120
DFY RR R+QDCF RPI+S PDAW DVVER S+D+NKTL RTTKTSRCLNLGSYNYLG
Sbjct: 53 DFYIRRLYHRIQDCFGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLG 112
Query: 121 FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV 180
F + DEYCTPRVIESLKK+SASTCS RVD G T +H ELE+ VA++VG+PAA++FGMGY
Sbjct: 113 FGSFDEYCTPRVIESLKKFSASTCSSRVDAGTTSVHAELEDCVAKYVGQPAAVIFGMGYA 172
Query: 181 TNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEEVLREQIAGGQ 240
TNSAIIP LIGKGGLIISDSLNH SIVNGARGSGA+++VFQHN P HLE+VL+EQIA GQ
Sbjct: 173 TNSAIIPVLIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPGHLEKVLKEQIAEGQ 232
Query: 241 PRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYTYLDEAHSIGAVGKTGRGVC 300
PRTHR WKKIIV+VEGIYSMEGE+C LPEIV++CKKYKAY YLDEAHSIGA+GKTGRGVC
Sbjct: 233 PRTHRPWKKIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVC 292
Query: 301 ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI 360
ELLGVD +DVDIMMGTFTKSFGSCGGYIA SK++I +LKH CPAH+YATS+S P+ Q+I
Sbjct: 293 ELLGVDTSDVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKHQCPAHLYATSISTPSATQII 352
Query: 361 SAIEVILGEDGSDRGAKKLAQIRENSNFFRSELEKMGFEVLGDNDSPVMPIMLYNPAKMP 420
SAI+VILGEDGS+RGA+KLA+IRENSNFFR+EL+KMGFEVLGDNDSPVMPIMLYNPAK+P
Sbjct: 353 SAIKVILGEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412
Query: 421 AFSRECLRQKVAIVTVSFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYL 480
AFSRECLR+ +A+V V FPATPLLLARARICISASHSREDLIK L+VISK GDL GIKY
Sbjct: 413 AFSRECLRENLAVVVVGFPATPLLLARARICISASHSREDLIKALQVISKAGDLTGIKYF 472
Query: 481 PVEHEK 486
P +K
Sbjct: 473 PAAPKK 478
>AT3G48790.1 | chr3:18093404-18095181 FORWARD LENGTH=351
Length = 350
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/348 (72%), Positives = 288/348 (82%), Gaps = 11/348 (3%)
Query: 151 GNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPALIGKGGLIISDSLNHNSIVNGA 210
G T +H ELEE VA+FVGKPAA++FGMGY+TNSAII LIGKGGLIISDSLNH SI+NGA
Sbjct: 7 GTTAVHGELEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIISDSLNHTSIINGA 66
Query: 211 RGSGASVQVFQHNNPAHLEEVLREQIAGGQPRTHRRWKKIIVIVEGIYSMEGELCKLPEI 270
RGSGA+++VFQHN +L+E I GQPRTHR WKKIIV+VEGIYSMEGE+C LPEI
Sbjct: 67 RGSGATIRVFQHN-------ILKEHIIEGQPRTHRPWKKIIVVVEGIYSMEGEICDLPEI 119
Query: 271 VAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAA 330
V+VC +YKAY YLDEAHSIGA+GKTGRGVCELLGVD +VDIMMGTFTKS GSCGGYIA
Sbjct: 120 VSVCSEYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTTEVDIMMGTFTKSLGSCGGYIAG 179
Query: 331 SKEIIDHLKHICPAHIYATSMSPPAVQQVISAIEVILGEDGSDRGAKKLAQIRENSNFFR 390
SK+++ +LK PAH+YATS+S PA QQVISAI+VI G DGS+RG KLA+IRENSNFFR
Sbjct: 180 SKDLVQYLKQHYPAHLYATSISTPAAQQVISAIKVIFGVDGSNRGELKLARIRENSNFFR 239
Query: 391 SELEKMGFEVLGDNDSPVMPIMLYNPAKMPAFSRECLRQKVAIVTVSFPATPLLLARARI 450
+EL+KMGF+VLG DSP+MPIMLYNPAK+ AFSRECLR+ +AIV VSFP PLLLARARI
Sbjct: 240 AELQKMGFKVLGVYDSPIMPIMLYNPAKIAAFSRECLRENLAIVVVSFPPIPLLLARARI 299
Query: 451 CISASHSREDLIKGLEVISKVGDLVGIKYLPV----EHEKTTSAEKLK 494
C SASH REDLIK L+VIS+ GDL GIKY + EK + K K
Sbjct: 300 CNSASHLREDLIKALQVISRAGDLTGIKYFTAAPKKQEEKNGNTSKFK 347
>AT4G36480.1 | chr4:17218598-17221124 FORWARD LENGTH=483
Length = 482
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 186/394 (47%), Gaps = 32/394 (8%)
Query: 102 HRTTKTSRCLNLGSYNYLGFAAAD---EYCTPRVIESLKKYSASTCSVRVDGGNTKLHVE 158
H T +N S NYLG + E CT +L+KY +C R G +H++
Sbjct: 103 HTTVNGKDVVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLD 158
Query: 159 LEELVARFVGKPAAILFGMGYVTNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQ 218
E +++F+G P +IL+ G T + IP KG +I++D H I NG + S +++
Sbjct: 159 CETRISKFLGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIV 218
Query: 219 VFQHNNPAHLEEVLREQIAGGQPRTH--RRWKKIIVIVEGIYSMEGELCKLPEIVAVCKK 276
F+HN+ L L E+I R+ RR+ ++ E +Y G++ L EIV + +K
Sbjct: 219 YFKHNDMESLRITL-EKIMTKYKRSKNLRRY----IVAEAVYQNSGQIAPLDEIVKLKEK 273
Query: 277 YKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIID 336
Y+ LDE++S G +G++GRG+ E V +D++ + + GG+ + IID
Sbjct: 274 YRFRVILDESNSFGVLGRSGRGLAEHHSVPIEKIDVVTAAMGHALATEGGFCTGNARIID 333
Query: 337 HLKHICPAHIYATSMSPPAVQQVISAIEVILGEDGSDRGAKKLAQIRENSNFFRSELEKM 396
+ + ++++ S+ P I+AI+VI D+ L ++++N L +
Sbjct: 334 YQRLSSSGYVFSASLPPYLASAAITAIDVI------DQNPDMLVKLKQNVALLWKGLSDI 387
Query: 397 -GFEVLGDNDSPVMPIMLYNPAK--------MPAFSRECLRQKVAIVTV---SFPATPLL 444
G + + +SP++ + L + + + L++ +V SF L
Sbjct: 388 KGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLEKMADRALKEDSLLVVSSKRSFLDKCRL 447
Query: 445 LARARICISASHSREDLIKGLEVISKVGDLVGIK 478
++ +SA HS DL+K E + ++ + +K
Sbjct: 448 PVGIKLYVSAGHSESDLLKASESLKRLASELLLK 481
>AT5G04620.2 | chr5:1327292-1329934 FORWARD LENGTH=477
Length = 476
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 173/391 (44%), Gaps = 45/391 (11%)
Query: 103 RTTKTSRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEEL 162
R + + L +YLG ++ + ++K+Y + G T H LE
Sbjct: 97 RKGRFKKLLLFSGNDYLGLSSHPTI-SNAAANAVKEYGMGPKGSALICGYTTYHRLLESS 155
Query: 163 VARFVGKPAAILFGMGYVTNSAIIPALIGKGGL--------------IISDSLNHNSIVN 208
+A+ K ++ G+ N A + A+ L I SD+LNH SI++
Sbjct: 156 LAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID 215
Query: 209 GAR----GSGASVQVFQHNNPAHLEEVLREQIAGGQPRTHRRWKKIIVIVEGIYSMEGEL 264
G R V V++H + HL +L ++ + K+ +V+ + ++SM+G+
Sbjct: 216 GVRLAERQGNVEVFVYRHCDMYHLNSLL----------SNCKMKRKVVVTDSLFSMDGDF 265
Query: 265 CKLPEIVAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC 324
+ E+ + KKY +D+AH G+ G GV E + ADVD+ +GT +K+ G
Sbjct: 266 APMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCH 324
Query: 325 GGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIEVILGEDGSDRGA-KKLAQIR 383
GG+IA SK+ ++ + I++T++ P +A+ V E + +++ + +
Sbjct: 325 GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEIWRRKAIWERVKEFK 384
Query: 384 ENSNFFRSELEKMGFEVLGDNDSPVMPIMLYNPAKMPAFSRECLRQKVAIVTVSFPATPL 443
E S D SP++ +++ N K SR L+ ++ + P P
Sbjct: 385 ELSGV--------------DISSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPP 430
Query: 444 LLARARICISASHSREDLIKGLEVISKVGDL 474
R R+ +SA+H+ ED+ K + +S D
Sbjct: 431 NSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,087,284
Number of extensions: 482773
Number of successful extensions: 1124
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1116
Number of HSP's successfully gapped: 5
Length of query: 497
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 394
Effective length of database: 8,282,721
Effective search space: 3263392074
Effective search space used: 3263392074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)