BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0922600 Os01g0922600|AK062581
(311 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 101 5e-22
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 101 5e-22
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 91 7e-19
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 87 1e-17
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 85 4e-17
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 83 2e-16
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 79 3e-15
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 79 3e-15
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 79 3e-15
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 77 1e-14
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 77 2e-14
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 75 5e-14
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 74 1e-13
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 71 8e-13
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 68 7e-12
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 67 2e-11
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 56 2e-08
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 1 SKCVRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHN 60
S C R+YH+RHKVC+ HSKT VVT+ G H L EFDE KRSCRKRLDGHN
Sbjct: 111 SNC-REYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHN 169
Query: 61 KRRRKPQPDPLN-PGNLFANHHGAA--RFTSYPQIFSTAASMSPQETKWPANVVKTEAA 116
+RRRKPQP+ + P N F G+ F+ +F T + ++P W ++V A
Sbjct: 170 RRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNP---SWGNSLVSVAVA 225
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 1 SKCVRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHN 60
S C R+YH+RHKVC+ HSKT VVT+ G H L EFDE KRSCRKRLDGHN
Sbjct: 111 SNC-REYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHN 169
Query: 61 KRRRKPQPDPLN-PGNLFANHHGAA--RFTSYPQIFSTAASMSPQETKWPANVVKTEAA 116
+RRRKPQP+ + P N F G+ F+ +F T + ++P W ++V A
Sbjct: 170 RRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNP---SWGNSLVSVAVA 225
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 52/91 (57%)
Query: 4 VRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRR 63
V+DYHRRHKVCE HSK TV G HLL EFDE KRSCR+RL GHNKRR
Sbjct: 118 VKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRR 177
Query: 64 RKPQPDPLNPGNLFANHHGAARFTSYPQIFS 94
RK P+P GN +H + +I S
Sbjct: 178 RKTNPEPGANGNPSDDHSSNYLLITLLKILS 208
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 87.4 bits (215), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/67 (58%), Positives = 43/67 (64%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+DYHRRHKVCE HSK V HLL EFDE KRSCR+RLDGHN+RRR
Sbjct: 95 KDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRR 154
Query: 65 KPQPDPL 71
K QPD +
Sbjct: 155 KTQPDAI 161
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 44/71 (61%)
Query: 4 VRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRR 63
V+DYHRRHKVCE HSK V G H+L EFDE KRSCR+RL GHNKRR
Sbjct: 139 VKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRR 198
Query: 64 RKPQPDPLNPG 74
RK PD + G
Sbjct: 199 RKANPDTIGNG 209
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 44/62 (70%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+DYH+RH+VCEAHSKT+VV V G H L EFD+ KRSCR+RL GHN+RRR
Sbjct: 137 KDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRR 196
Query: 65 KP 66
KP
Sbjct: 197 KP 198
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+DYHR+H+VCE HSK V V+G H + EFDE+KRSCRKRL HN RRR
Sbjct: 189 KDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRR 248
Query: 65 KPQPD-PLNPGNLF 77
KPQ PLN +F
Sbjct: 249 KPQGVFPLNSERVF 262
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+ Y+ RH+VC HSKT VTVAG H L EFD EKRSCR+RL GHN+RRR
Sbjct: 87 KGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRR 146
Query: 65 KPQPDPLNPGNLFANHHGAARFTSYPQ--IFSTAASMSPQETKWPANVVKTEAADVFQEP 122
KPQP L ++ A+ +G + Y + + QE WP++ +T V + P
Sbjct: 147 KPQPASL---SVLASRYGRIAPSLYENGDAGMNGSFLGNQEIGWPSS--RTLDTRVMRRP 201
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+DYHRRHKVCE HSK V HLL EFDE KRSCR+RL GHN+RRR
Sbjct: 133 KDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRR 192
Query: 65 K-PQPDPLNPGNLFANHHGAARFTS 88
K QP+ + G + +H T+
Sbjct: 193 KTTQPEEVASGVVVPGNHDTTNNTA 217
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+DYHR+H++CE HSK V V+G H L EFDE+KRSCR+RL HN RRR
Sbjct: 182 KDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRR 241
Query: 65 KPQP 68
KP P
Sbjct: 242 KPNP 245
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 4 VRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRR 63
V+ Y+ RHKVC HSK++ V V+G H L EFD EKRSCR+RL HN+RR
Sbjct: 71 VKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRSCRRRLACHNERR 130
Query: 64 RKPQPDPLNPGNLFANHH-----------GAARFTSY---PQIFSTAASMSPQETKWPAN 109
RKPQP LF +H+ AA S P +STA S+ + W N
Sbjct: 131 RKPQPT----TALFTSHYSRIAPSLYGNPNAAMIKSVLGDPTAWSTARSVMQRPGPWQIN 186
Query: 110 VVK 112
V+
Sbjct: 187 PVR 189
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+ YHR+HKVCE HSK V+V+G H + EFDE+KRSCRKRL HN RRR
Sbjct: 188 KGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRR 247
Query: 65 KPQPD-PLNPGNLF 77
KPQ +NP ++
Sbjct: 248 KPQGVFSMNPERVY 261
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 37/59 (62%)
Query: 7 YHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRRK 65
YHRRHKVCE HSK + V AG HLL EFD KRSCRKRL HN+RRRK
Sbjct: 203 YHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRK 261
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%)
Query: 5 RDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRR 64
+ Y+RRH+VCE H+K + TVAG H L EFDE KRSCR+RL GHN+RRR
Sbjct: 76 KQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRR 135
Query: 65 KPQPDPLNPGN 75
K D G+
Sbjct: 136 KISGDSFGEGS 146
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 39/59 (66%)
Query: 7 YHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRRRK 65
YHRRHKVCE H+K + V ++G H L EFDE KRSCR+RL GHN+RRRK
Sbjct: 69 YHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRK 127
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%)
Query: 4 VRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRR 63
+ YH+RHKVC+ H+K V ++G H L EFDE KRSCR+RL GHN+RR
Sbjct: 66 AKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNERR 125
Query: 64 RKPQPD 69
RK D
Sbjct: 126 RKSTTD 131
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 4 VRDYHRRHKVCEAHSKTAVVTVAGXXXXXXXXXXXXHLLGEFDEEKRSCRKRLDGHNKRR 63
++ YH+RH+VC + + V + G HLL +FDE KRSCR++L+ HN RR
Sbjct: 150 LKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRR 209
Query: 64 RKPQPDPLNPGNLFANHH 81
++ P++ G + A
Sbjct: 210 KR---KPVDKGGVAAEQQ 224
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,288,821
Number of extensions: 167374
Number of successful extensions: 381
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 381
Number of HSP's successfully gapped: 17
Length of query: 311
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 213
Effective length of database: 8,419,801
Effective search space: 1793417613
Effective search space used: 1793417613
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)