BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0921800 Os01g0921800|Os01g0921800
         (369 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67340.1  | chr1:25230323-25231622 FORWARD LENGTH=380          226   2e-59
AT5G50450.1  | chr5:20543519-20544698 REVERSE LENGTH=337          200   1e-51

>AT1G67340.1 | chr1:25230323-25231622 FORWARD LENGTH=380
          Length = 379

 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/298 (44%), Positives = 150/298 (50%), Gaps = 22/298 (7%)

Query: 69  LTCKRLNGLGRHDMVFAKASPASLAVKAASWSEPVQRFLKLCADAGNLEACYILGMIRFY 128
           LTCKRL GL  + +V ++ SP ++AVKA +WSE   RFLK C DAG+LEACY LGMIRFY
Sbjct: 74  LTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFY 133

Query: 129 CLGNRSXXXXXXXXXXXXXXXXXXYSLAVIQFNGSGGAKSXXXXXXXXXXXXXXXXXXHV 188
           CL NR                   YSLAVIQFNGSGG+K+                  HV
Sbjct: 134 CLQNRGNGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHV 193

Query: 189 DALRELGHCLQDGYGVRRDPAEGRRFLVXXXXXXXXXXXXXXXXXXXXXXXXXX----XX 244
           DALRELGHCLQDGYGV ++ +EGRRFLV                                
Sbjct: 194 DALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVV 253

Query: 245 XXXXXXXXXXXSDFGWSLPEAEPHPANLFMADWWASRGVQATAKKPGLEAPAAATGDSDG 304
                      SDFG ++P  E HPAN F+ADW+A RG                 GD  G
Sbjct: 254 PNHGQQTCPLLSDFGCNVPAPETHPANRFLADWFAVRG-----------------GDCPG 296

Query: 305 GGELRLCSHVXXXXXXXXXXXXXXXSVCGAANYCSRACQALDWKRAHKAQCVPMDRWL 362
            G LRLCSH                SVCG  NYCSRACQALDWK  HK  C P+ RWL
Sbjct: 297 DG-LRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWL 353



>AT5G50450.1 | chr5:20543519-20544698 REVERSE LENGTH=337
          Length = 336

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 138/298 (46%), Gaps = 33/298 (11%)

Query: 70  TCKRLNGLGRHDMVFAKASPASLAVKAASWSEPVQRFLKLCADAGNLEACYILGMIRFYC 129
           TCKRLN LG H +V +KA   +LAV A  WS+   +FLKLC +AGN++A Y LGMIRFYC
Sbjct: 53  TCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYC 112

Query: 130 LGNRSXXXXXXXXXXXXXXXXXXYSLAVIQFNGSGGAKSXXXXXXXXXXXXXXXXXXHVD 189
           L N                    YSL+VIQFNGSGG+K+                  HVD
Sbjct: 113 LQNPVSGASLMAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVD 172

Query: 190 ALRELGHCLQDGYGVRRDPAEGRRFLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 249
           ALRELGHCLQDGYGV RD +EGRR L+                                 
Sbjct: 173 ALRELGHCLQDGYGVPRDVSEGRRLLIQANARELACSLRSYLSLKSGDENETLTDLSV-- 230

Query: 250 XXXXXXSDFGWSLPEAEPHPANLFMADWWASRGVQATAKKPGLEAPAAATGDSDGGGELR 309
                       +P  E HP N F+ +W++S                   G  D    LR
Sbjct: 231 ------------VPVQEIHPVNRFLKEWFSS-------------------GRVDLAEGLR 259

Query: 310 LCSHVXXXXXXXXXXXXXXXSVCGAANYCSRACQALDWKRAHKAQCVPMDRWLLAAGE 367
           +CSH                SVCG  NYCSR CQALDW+  HK +C P+D W+ AA E
Sbjct: 260 MCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTPLDLWVAAAAE 317



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.135    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,603,847
Number of extensions: 152584
Number of successful extensions: 250
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 244
Number of HSP's successfully gapped: 4
Length of query: 369
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 269
Effective length of database: 8,364,969
Effective search space: 2250176661
Effective search space used: 2250176661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)