BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0911700 Os01g0911700|AK073805
(704 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24650.1 | chr3:8997911-9000780 FORWARD LENGTH=721 209 5e-54
AT3G26790.1 | chr3:9854025-9855748 REVERSE LENGTH=314 135 1e-31
AT1G28300.1 | chr1:9897054-9899838 REVERSE LENGTH=364 121 1e-27
AT2G30470.1 | chr2:12980904-12984724 REVERSE LENGTH=791 81 2e-15
AT4G32010.1 | chr4:15481231-15484897 FORWARD LENGTH=781 79 7e-15
AT4G21550.1 | chr4:11463104-11468486 FORWARD LENGTH=714 73 4e-13
AT1G68840.1 | chr1:25880442-25881500 FORWARD LENGTH=353 57 5e-08
AT1G25560.1 | chr1:8981891-8982976 REVERSE LENGTH=362 54 4e-07
AT4G01500.1 | chr4:639791-640792 FORWARD LENGTH=334 52 1e-06
AT1G13260.1 | chr1:4542386-4543420 FORWARD LENGTH=345 52 1e-06
AT3G25730.1 | chr3:9396505-9397506 FORWARD LENGTH=334 51 2e-06
>AT3G24650.1 | chr3:8997911-9000780 FORWARD LENGTH=721
Length = 720
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 147/256 (57%), Gaps = 20/256 (7%)
Query: 365 YSGGHAMCSPRLAGVEPSSTKEARKKRMAXXXXXXXXXXXXXXXXXXXXIHISGHPQEPS 424
Y M RL + S+TKEARKKRMA + Q
Sbjct: 436 YVPAGQMRDQRLLRLCSSATKEARKKRMARQRRFLSHHHRHNNNNNNNNNNQQNQTQIGE 495
Query: 425 PRAAHSAPVTP--SSAGCRSWGIWPPAAQIIQNPLSNKPNPPPAXXXXXXXXXXXXXXXX 482
AA + + P ++A +W WP + P PP
Sbjct: 496 TCAAVAPQLNPVATTATGGTWMYWPNVPAV-------PPQLPPVMETQLPTMDRAGSASA 548
Query: 483 XXXXXXXXXSLQRSTASEKRQA-KTDKNLRFLLQKVLKQSDVGSLGRIVLPK-EAEVHLP 540
++ ++RQ K +KNLRFLLQKVLKQSDVG+LGRIVLPK EAE HLP
Sbjct: 549 MP---------RQQVVPDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLP 599
Query: 541 ELKTRDGVSIPMEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYS 600
EL+ RDG+S+ MEDIGTS+VWNMRYRFWPNNKSRMYLLENTGDFV++N LQEGDFIVIYS
Sbjct: 600 ELEARDGISLAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYS 659
Query: 601 DIKSGKYLIRGVKVRR 616
D+K GKYLIRGVKVR+
Sbjct: 660 DVKCGKYLIRGVKVRQ 675
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 160 DDLPAFFMEWLTSNREYISADDLRSIRLRRSTIEXXXXXXXXXXXXTMQLLKLILTWVQN 219
DDL A F+EWL +N+E +SA+DLR ++++++TIE QLLKLIL WVQ
Sbjct: 244 DDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEWVQT 303
Query: 220 HHLQ 223
+HLQ
Sbjct: 304 NHLQ 307
>AT3G26790.1 | chr3:9854025-9855748 REVERSE LENGTH=314
Length = 313
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 85/115 (73%), Gaps = 4/115 (3%)
Query: 508 KNLRFLLQKVLKQSDVGSLGRIVLPKEA-EVHLPELKTRDGVSIPMEDIGTSQVWNMRYR 566
+ LRFL QK LK SDV SL R++LPK+A E HLP L+ ++G+ I MED+ VW +YR
Sbjct: 86 RKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYR 145
Query: 567 FWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYLIRGVKVRRAAQEQ 621
+WPNN SRMY+LENTGDFV ++ LQ GDFI++Y D+ S Y+I+ R+A++E+
Sbjct: 146 YWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQA---RKASEEE 197
>AT1G28300.1 | chr1:9897054-9899838 REVERSE LENGTH=364
Length = 363
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
Query: 492 SLQRSTASEKRQAKT--DKNLRFLLQKVLKQSDVGSLGRIVLPK-EAEVHLPELKTRDGV 548
++Q S + Q T +K LR L +K LK SDVGSLGRIVLPK +AE +LP+L ++G+
Sbjct: 147 NVQISDKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGI 206
Query: 549 SIPMEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYL 608
+ M D+ + Q W+ +Y+FW NNKSRMY+LENTG+FV+ N + GDF+ IY D Y
Sbjct: 207 VVQMRDVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYF 266
>AT2G30470.1 | chr2:12980904-12984724 REVERSE LENGTH=791
Length = 790
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 497 TASEKRQAKTDKNLRF--LLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIPME 553
T E +Q + NL L +K L SD G +GR+VLPK AE + P + +G+ + ++
Sbjct: 276 TDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQ 335
Query: 554 DIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYLIRGVK 613
D+ + W ++R+WPNN SRMY+LE ++S LQ GD V +S + G LI G
Sbjct: 336 DV-RGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGD-TVTFSRVDPGGKLIMG-- 391
Query: 614 VRRAAQEQGNSSGA 627
R A G+ G
Sbjct: 392 -SRKAANAGDMQGC 404
>AT4G32010.1 | chr4:15481231-15484897 FORWARD LENGTH=781
Length = 780
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 513 LLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIPMEDIGTSQVWNMRYRFWPNN 571
L +KVL SD G +GR+VLPK AE + P + +G+ + ++DI + W ++RFWPNN
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDIKGKE-WVFQFRFWPNN 343
Query: 572 KSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYLI 609
SRMY+LE ++S +LQ GD + GK ++
Sbjct: 344 NSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGKLVM 381
>AT4G21550.1 | chr4:11463104-11468486 FORWARD LENGTH=714
Length = 713
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 513 LLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIPMEDIGTSQVWNMRYRFWPNN 571
L +K+L +D G R+VLPK+ AE LP+L GV + ++D + W ++RFWP++
Sbjct: 327 LFEKILSATDTGK--RLVLPKKYAEAFLPQLSHTKGVPLTVQD-PMGKEWRFQFRFWPSS 383
Query: 572 KSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYLIRGVKVRRAAQEQGNSSGA---- 627
K R+Y+LE F+++ +LQ GD VI+S + + LI G + Q + A
Sbjct: 384 KGRIYVLEGVTPFIQTLQLQAGD-TVIFSRLDPERKLILGFRKASITQSSDQADPADMHS 442
Query: 628 ---VGKHKHGSPEKPGV 641
V K + + E PGV
Sbjct: 443 PFEVKKSAYITKETPGV 459
>AT1G68840.1 | chr1:25880442-25881500 FORWARD LENGTH=353
Length = 352
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 494 QRSTASEKRQAKTDKNLRFLLQKVLKQSDVGSLGRIVLPKE-AEVHL----PELKTRDGV 548
+R+ +S + K K L +K + SDVG L R+V+PK+ AE H P GV
Sbjct: 168 KRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGV 227
Query: 549 SIPMEDIGTSQVWNMRYRFWPNNKSRMYLL-ENTGDFVRSNELQEGDFIVIYSDIKSGKY 607
I ED+ +VW RY +W N S+ Y+L + FV+ L+ GD + +
Sbjct: 228 LINFEDV-NGKVWRFRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQ 284
Query: 608 LIRGVKVRRAAQEQ 621
L KVR +E
Sbjct: 285 LYIDWKVRSGPREN 298
>AT1G25560.1 | chr1:8981891-8982976 REVERSE LENGTH=362
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 513 LLQKVLKQSDVGSLGRIVLPKE-AEVH--LPELKT--------RDGVSIPMEDIGTSQVW 561
L +K + SDVG L R+V+PK+ AE H LP + T GV I +ED T +VW
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLED-RTGKVW 252
Query: 562 NMRYRFWPNNKSRMYLL-ENTGDFVRSNELQEGDFIVI 598
RY +W N S+ Y+L + FV+ L+ GD +
Sbjct: 253 RFRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
>AT4G01500.1 | chr4:639791-640792 FORWARD LENGTH=334
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 513 LLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIPMEDIGTSQVWNMRYRFWPNN 571
+ KVL SDVG L R+V+PK+ AE P ++G + +D ++W RY +W N
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQD-KNGKMWRFRYSYW--N 91
Query: 572 KSRMYLL-ENTGDFVRSNELQEGDFIVIY 599
S+ Y++ + FV+ +L GD + Y
Sbjct: 92 SSQSYVMTKGWSRFVKEKKLFAGDTVSFY 120
>AT1G13260.1 | chr1:4542386-4543420 FORWARD LENGTH=345
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 513 LLQKVLKQSDVGSLGRIVLPK-EAEVHLP---ELKTRDGVSIPMEDIGTSQVWNMRYRFW 568
L +K + SDVG L R+V+PK AE H P + GV + ED+ +VW RY +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDV-NGKVWRFRYSYW 245
Query: 569 PNNKSRMYLL-ENTGDFVRSNELQEGDFI 596
N S+ Y+L + FV+ L+ GD +
Sbjct: 246 --NSSQSYVLTKGWSRFVKEKNLRAGDVV 272
>AT3G25730.1 | chr3:9396505-9397506 FORWARD LENGTH=334
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 508 KNLRFLLQKVLKQSDVGSLGRIVLPK-EAEVHLPELKTRDGVSIP-----MEDIGTSQVW 561
K L +K + SDVG L R+V+PK +AE H P + VS+ ED+ +VW
Sbjct: 177 KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVN-GKVW 235
Query: 562 NMRYRFWPNNKSRMYLL-ENTGDFVRSNELQEGDFI 596
RY +W N S+ Y+L + FV+ L GD I
Sbjct: 236 RFRYSYW--NSSQSYVLTKGWSRFVKEKRLCAGDLI 269
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,703,982
Number of extensions: 494963
Number of successful extensions: 1083
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1085
Number of HSP's successfully gapped: 13
Length of query: 704
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 598
Effective length of database: 8,200,473
Effective search space: 4903882854
Effective search space used: 4903882854
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 115 (48.9 bits)