BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0911100 Os01g0911100|AK064782
         (117 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63120.2  | chr5:25318967-25322071 REVERSE LENGTH=592           74   1e-14
AT1G55150.1  | chr1:20574634-20577141 FORWARD LENGTH=502           62   5e-11
AT3G06480.1  | chr3:1985697-1989666 REVERSE LENGTH=1089            48   1e-06
AT5G14610.1  | chr5:4711271-4714713 FORWARD LENGTH=713             47   2e-06
AT3G01540.2  | chr3:213077-216142 REVERSE LENGTH=620               47   3e-06

>AT5G63120.2 | chr5:25318967-25322071 REVERSE LENGTH=592
          Length = 591

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/66 (56%), Positives = 41/66 (62%)

Query: 12  DVKDIKCVINFDFPTTLEDYIHXXXXXXXXXXXXXXXXXXXLSNAKFSRNLVKILREAGQ 71
           DVKDIKCV+N+DFP TLEDYIH                     NAKF+R LVKIL+EAGQ
Sbjct: 475 DVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQ 534

Query: 72  VVNPAL 77
           VV P L
Sbjct: 535 VVPPTL 540



>AT1G55150.1 | chr1:20574634-20577141 FORWARD LENGTH=502
          Length = 501

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 12  DVKDIKCVINFDFPTTLEDYIHXXXXXXXXXXXXXXXXXXXLSNAKFSRNLVKILREAGQ 71
           DVKD+K VIN+DFP +LEDY+H                   ++NA+F++ L  IL+EAGQ
Sbjct: 409 DVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQ 468

Query: 72  VVNPAL 77
            V+P L
Sbjct: 469 KVSPEL 474



>AT3G06480.1 | chr3:1985697-1989666 REVERSE LENGTH=1089
          Length = 1088

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 12  DVKDIKCVINFDFPTTLEDYIHXXXXXXXXXXXXXXXXXXXLSNAKFSRNLVKILREAGQ 71
           D+KDI+ VIN+DFPT +EDY+H                     + K++ +L+K+L  A Q
Sbjct: 744 DIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQ 803

Query: 72  VVNP 75
            V P
Sbjct: 804 QVPP 807



>AT5G14610.1 | chr5:4711271-4714713 FORWARD LENGTH=713
          Length = 712

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 33/64 (51%)

Query: 12  DVKDIKCVINFDFPTTLEDYIHXXXXXXXXXXXXXXXXXXXLSNAKFSRNLVKILREAGQ 71
           DVKDI+ V+N+DFP  +EDY+H                     +AK + +L+KIL  A Q
Sbjct: 538 DVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQ 597

Query: 72  VVNP 75
            V P
Sbjct: 598 KVPP 601



>AT3G01540.2 | chr3:213077-216142 REVERSE LENGTH=620
          Length = 619

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 12  DVKDIKCVINFDFPTTLEDYIHXXXXXXXXXXXXXXXXXXXLSNAKFSRNLVKILREAGQ 71
           DVKDI+ V+N+DFP  +EDY+H                     ++K + +L+KIL  A Q
Sbjct: 467 DVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQ 526

Query: 72  VVNPAL 77
            V P +
Sbjct: 527 RVPPQI 532



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.329    0.145    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,376,604
Number of extensions: 25842
Number of successful extensions: 107
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 108
Number of HSP's successfully gapped: 5
Length of query: 117
Length of database: 11,106,569
Length adjustment: 85
Effective length of query: 32
Effective length of database: 8,776,209
Effective search space: 280838688
Effective search space used: 280838688
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 105 (45.1 bits)