BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0904500 Os01g0904500|AK119437
(814 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01720.1 | chr3:262412-265608 REVERSE LENGTH=803 1075 0.0
AT5G13500.1 | chr5:4338676-4340827 FORWARD LENGTH=359 67 3e-11
AT5G25265.1 | chr5:8754794-8756855 REVERSE LENGTH=367 61 2e-09
AT2G25260.1 | chr2:10755617-10757766 REVERSE LENGTH=359 51 2e-06
>AT3G01720.1 | chr3:262412-265608 REVERSE LENGTH=803
Length = 802
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/719 (68%), Positives = 590/719 (82%), Gaps = 12/719 (1%)
Query: 18 SPVSSEAAAGEGRRLHTLFSVECGDYFDWQAVGLLHSLRKAGQPGGVTRLLSCAADQLPS 77
S ++ E+ R+HTLFSVEC +YFDWQ VGL+HS K+GQPG +TRLLSC DQ +
Sbjct: 16 SVLADESGQMAPYRIHTLFSVECQNYFDWQTVGLMHSFLKSGQPGPITRLLSCTDDQKKT 75
Query: 78 YRGLRIGHTLQVPSYSRHPRTGDWYPAINKPAGVVHWLKHSVEANNVDWVVILDADQIVR 137
YRG+ + T +VPS+SRHP+TGDWYPAINKP GV++WL+HS EA +VDWVVILDAD I+R
Sbjct: 76 YRGMNLAPTFEVPSWSRHPKTGDWYPAINKPVGVLYWLQHSEEAKHVDWVVILDADMIIR 135
Query: 138 GPIIPWELGAEKGKPVAAYYGYLKGCDNILAQLHTAHPEFCDKVGGILAMHIDDLRALAP 197
GPIIPWELGAE+G+P AA+YGYL GCDN+L +LHT HPE CDKVGG+LAMHIDDLR LAP
Sbjct: 136 GPIIPWELGAERGRPFAAHYGYLVGCDNLLVRLHTKHPELCDKVGGLLAMHIDDLRVLAP 195
Query: 198 LWLSKTEEVRQDKSHWSTNITGDIYGMGWISEMYGYSFGAAEVGLRHKINDDIMIYPGYT 257
LWLSKTE+VRQD +HW+TN+TGDIYG GWISEMYGYSFGAAE GL+HKINDD+MIYPGY
Sbjct: 196 LWLSKTEDVRQDTAHWTTNLTGDIYGKGWISEMYGYSFGAAEAGLKHKINDDLMIYPGYV 255
Query: 258 PRIGIDPLILHYGLPFKVGNWSFSKLEHHEDGIAYDCNRLFPPPPFPREVEMMESDPNVK 317
PR G++P+++HYGLPF +GNWSF+KL+HHED I YDCNRLFP PP+PREV++ME DP+ +
Sbjct: 256 PREGVEPVLMHYGLPFSIGNWSFTKLDHHEDNIVYDCNRLFPEPPYPREVKIMEPDPSKR 315
Query: 318 RGLYLSIECINTLNEGLVLHHASVGCPKPQWSKYLSFLKSRRFSELTKPKHWNGQTIENR 377
RGL LS+EC+NTLNEGL+L HA GCPKP+W+KYLSFLKS+ F ELT+PK ++
Sbjct: 316 RGLILSLECMNTLNEGLILRHAENGCPKPKWTKYLSFLKSKTFMELTRPKLLAPGSV--- 372
Query: 378 NIV--QHVASLKEDHK--LPKIHTLFSTECTPYFDWQTVGLMHSLRVSRQPGNITRLLSC 433
+I+ QH ++ K PKIHTLFSTECT YFDWQTVG MHS R S QPGNITRLLSC
Sbjct: 373 HILPDQHEPPPIDEFKGTYPKIHTLFSTECTTYFDWQTVGFMHSFRQSGQPGNITRLLSC 432
Query: 434 SDEDLKNYKGHDLAPTHYVPSMNRHPLTGDWYPAINKPAAVLHWISHVETDAEFIVILDA 493
+DE LKNYKGHDLAPTHYVPSM+RHPLTGDWYPAINKPAAV+HW+ H DAE++VILDA
Sbjct: 433 TDEALKNYKGHDLAPTHYVPSMSRHPLTGDWYPAINKPAAVVHWLHHTNIDAEYVVILDA 492
Query: 494 DMIMRGPITPWEYGAKLGHPVSTPYEYLIGCDNILAKIHTRNPSACDKVGGVIIMHIDDL 553
DMI+RGPITPWE+ A G PVSTPY+YLIGCDN LA++HTRNP ACDKVGGVIIMHI+DL
Sbjct: 493 DMILRGPITPWEFKAARGRPVSTPYDYLIGCDNDLARLHTRNPEACDKVGGVIIMHIEDL 552
Query: 554 RRFAMLWLHKTEEVRADKAHYATNITGDIYSSGWISEMYGYSFAAAELGLHHIIRRDILI 613
R+FAM WL KT+EVRADK HY +TGDIY SGWISEMYGYSF AAEL L H I ++I+I
Sbjct: 553 RKFAMYWLLKTQEVRADKEHYGKELTGDIYESGWISEMYGYSFGAAELNLRHSINKEIMI 612
Query: 614 YPGYVPVPEVHYKVFHYGLRFGVGNWSFDKADWRNVDVVNTCWAKFPEPPDPTTVMKEDQ 673
YPGYVP P Y+VFHYGL F VGNWSFDKA+WRN D++N CWAKFP+PP P+ V + D
Sbjct: 613 YPGYVPEPGADYRVFHYGLEFKVGNWSFDKANWRNTDLINKCWAKFPDPPSPSAVHQTDN 672
Query: 674 AARERDLLSIACGRALNKALYWHHKSRDCPRPSPVDGASKKFQKVTASNDLGGGNTEQS 732
R+RDLLSI CG+ LN+AL+ HHK R+CP P S+ +K++ S +G T+Q+
Sbjct: 673 DLRQRDLLSIECGQKLNEALFLHHKRRNCPEP-----GSESTEKISVSRKVGNIETKQT 726
>AT5G13500.1 | chr5:4338676-4340827 FORWARD LENGTH=359
Length = 358
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 47/291 (16%)
Query: 379 IVQHVASLKEDHKLPK-IHTLFSTECTPYFDWQTVGLMHSLRVSR-----QPGNITRLLS 432
+VQ ++++ P H + PY WQ + + + + G TR+L
Sbjct: 46 VVQMPLNIRKAKSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILH 105
Query: 433 CSDEDLKNYKGHDLAPTHYV----PSMNRHPLTGDWYPAINKPAAVLHWISHVETDAEFI 488
+ D D PT V P ++R Y +N+P A + W+ +++
Sbjct: 106 SGNSD----NLMDEIPTFVVDPLPPGLDRG------YVVLNRPWAFVQWLERATIKEDYV 155
Query: 489 VILDADMIMRGPITPWEYGAKLGHPVSTPYEYLI--GCDNILAKIHTRN---PSACDKVG 543
++ + D + P+ G G P + P+ Y+ +NI+ K + + D +G
Sbjct: 156 LMAEPDHVFVNPLPNLAVG---GFPAAFPFFYITPEKYENIVRKYYPAEMGPVTNIDPIG 212
Query: 544 GV-IIMHIDDLRRFAMLWLHKTEEVRADKAHYATNITGDIYSSGWISEMYGYSFAAAELG 602
+I+ + L + A W++ + ++ D + GW+ EMYGY+ A+A G
Sbjct: 213 NSPVIISKESLEKIAPTWMNVSLTMKNDPETDK--------AFGWVLEMYGYAIASAIHG 264
Query: 603 LHHIIRRDILIYPGYVPVPEVHYKV-FHYG--------LRFG-VGNWSFDK 643
+ HI+R+D ++ P + + + + + YG L +G +G W FDK
Sbjct: 265 VRHILRKDFMLQPPWDLSTKGKFIIHYTYGCDYNMKGELTYGKIGEWRFDK 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 52/315 (16%)
Query: 19 PVSSEAAAGEGRRLHTLFSVECGDYFDWQAVGLLHSLR-KAGQPG----GVTRLL-SCAA 72
P++ A H + Y WQ + + + K PG G TR+L S +
Sbjct: 50 PLNIRKAKSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNS 109
Query: 73 DQLPSYRGLRIGHTLQVPSYSRHPRTGDW---YPAINKPAGVVHWLKHSVEANNVDWVVI 129
D L ++P++ P Y +N+P V WL+ + D+V++
Sbjct: 110 DNLMD----------EIPTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKE--DYVLM 157
Query: 130 LDADQIVRGPIIPWELGAEKGKPVAAYYGYL--KGCDNILAQLHTAHPEFCDKVGGI--- 184
+ D + P+ +G G P A + Y+ + +NI+ + + A + I
Sbjct: 158 AEPDHVFVNPLPNLAVG---GFPAAFPFFYITPEKYENIVRKYYPAEMGPVTNIDPIGNS 214
Query: 185 -LAMHIDDLRALAPLWLSKTEEVRQDKSHWSTNITGDIYGMGWISEMYGYSFGAAEVGLR 243
+ + + L +AP W++ + ++ D GW+ EMYGY+ +A G+R
Sbjct: 215 PVIISKESLEKIAPTWMNVSLTMKNDPE--------TDKAFGWVLEMYGYAIASAIHGVR 266
Query: 244 HKINDDIMIYPGYTPRIGIDPLILH--YGLPF---------KVGNWSFSKLEHHEDGIAY 292
H + D M+ P + I+H YG + K+G W F K H
Sbjct: 267 HILRKDFMLQPPWDLSTK-GKFIIHYTYGCDYNMKGELTYGKIGEWRFDKRSHLRGPPPR 325
Query: 293 DCNRLFPPPPFPREV 307
N PPP P V
Sbjct: 326 --NMSLPPPGVPESV 338
>AT5G25265.1 | chr5:8754794-8756855 REVERSE LENGTH=367
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 60/285 (21%)
Query: 395 IHTLFSTECTPYFDWQTVGLMH---SLRVSRQPGN----ITRLLSCSDEDLKNYKGHDLA 447
HT + + Y WQ + + ++ S PG+ TR+L H
Sbjct: 70 FHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRIL------------HSGK 117
Query: 448 PTHY---VPSMNRHPLTGDW---YPAINKPAAVLHWISHVETDAEFIVILDADMIMRGPI 501
P Y +P+ PL Y +N+P A + W+ + ++I++ + D I+ PI
Sbjct: 118 PDQYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKEDYILMSEPDHIIVKPI 177
Query: 502 TPWEYGAKLGHPVSTPYEYL--IGCDNILAKIH--TRNP-SACDKVGGV-IIMHIDDLRR 555
AK G + P+ Y+ + +L K + R P + D +G +I+ D L++
Sbjct: 178 PNL---AKDGLGAAFPFFYIEPKKYEKVLRKYYPEVRGPVTNIDPIGNSPVIVGKDALKK 234
Query: 556 FAMLWLHKT----EEVRADKAHYATNITGDIYSSGWISEMYGYSFAAAELGLHHIIRRDI 611
A W++ + ++ ADKA GW+ EMY Y+ ++A G+ +I+ +D
Sbjct: 235 IAPTWMNVSLAMKKDPEADKAF------------GWVLEMYAYAVSSALHGVSNILHKDF 282
Query: 612 LIYPGY-VPVPEVHYKVFHYG--------LRFG-VGNWSFDKADW 646
+I P + + V + + + YG L +G +G W FDK +
Sbjct: 283 MIQPPWDIEVGDKYIIHYTYGCDYDMKGKLTYGKIGEWRFDKRSY 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 56/307 (18%)
Query: 30 RRLHTLFSVECGDYFDWQAVGLLHSLRK-------AGQPGGVTRLL-SCAADQLPSYRGL 81
R HT + Y WQ + + +K + GG TR+L S DQ
Sbjct: 68 RLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPDQ------- 120
Query: 82 RIGHTLQVPSYSRHPRTGDW---YPAINKPAGVVHWLKHSVEANNVDWVVILDADQIVRG 138
+ ++P++ P Y +N+P V WL+ + D++++ + D I+
Sbjct: 121 ---YMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKE--DYILMSEPDHIIVK 175
Query: 139 PIIPWELGAEKGKPVAAYYGYLKGCDNILAQLHTAHPEFCDKVGGI-------LAMHIDD 191
PI P G +Y K + +L + + PE V I + + D
Sbjct: 176 PI-PNLAKDGLGAAFPFFYIEPKKYEKVLRKYY---PEVRGPVTNIDPIGNSPVIVGKDA 231
Query: 192 LRALAPLWLSKTEEVRQDKSHWSTNITGDIYGMGWISEMYGYSFGAAEVGLRHKINDDIM 251
L+ +AP W++ + +++D GW+ EMY Y+ +A G+ + ++ D M
Sbjct: 232 LKKIAPTWMNVSLAMKKDPEADK--------AFGWVLEMYAYAVSSALHGVSNILHKDFM 283
Query: 252 IYPGYTPRIGIDPLILH--YGLPF---------KVGNWSFSKLEHHEDGIAYDCNRLFPP 300
I P + +G D I+H YG + K+G W F K + D N PP
Sbjct: 284 IQPPWDIEVG-DKYIIHYTYGCDYDMKGKLTYGKIGEWRFDKRSY--DSKPPPRNLTMPP 340
Query: 301 PPFPREV 307
P + V
Sbjct: 341 PGVSQSV 347
>AT2G25260.1 | chr2:10755617-10757766 REVERSE LENGTH=359
Length = 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 465 YPAINKPAAVLHWISHVETDAEFIVILDADMIMRGPITPWEYGAKLGHPVSTPYEYL--I 522
Y +N+P A + W+ + ++I++ + D I+ PI G + P+ Y+
Sbjct: 133 YVVLNRPWAFVQWLQQAHIEEDYILMAEPDHIIVKPIPNLARG---NLAAAFPFFYIEPK 189
Query: 523 GCDNILAKIHTRNP---SACDKVGGV-IIMHIDDLRRFAMLWLHKTEEVRADKAHYATNI 578
+++L K + S D +G +I+ + L + A W++ + ++ D
Sbjct: 190 KYESVLRKFFPKENGPISRIDPIGNSPVIVTKNALMKIAPTWMNVSLAMKNDPQTDK--- 246
Query: 579 TGDIYSSGWISEMYGYSFAAAELGLHHIIRRDILIYPGYVPVPEVHYKV-FHYGLRFG-- 635
+ GW+ EMY Y+ ++A G+ +I+ +D +I P + + + + + YG F
Sbjct: 247 -----AFGWVLEMYAYAVSSALHGVSNILHKDFMIQPPWDTETKKTFIIHYTYGCDFDMK 301
Query: 636 -------VGNWSFDKADW 646
+G W FDK +
Sbjct: 302 GKMMVGKIGEWRFDKRSY 319
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,000,447
Number of extensions: 874602
Number of successful extensions: 1691
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1682
Number of HSP's successfully gapped: 6
Length of query: 814
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 707
Effective length of database: 8,173,057
Effective search space: 5778351299
Effective search space used: 5778351299
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)