BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0899800 Os01g0899800|015-064-C09
(343 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20840.1 | chr3:7300764-7303370 FORWARD LENGTH=575 198 3e-51
AT5G57390.1 | chr5:23253459-23256437 REVERSE LENGTH=559 198 3e-51
AT5G17430.1 | chr5:5742542-5745568 REVERSE LENGTH=585 198 3e-51
AT1G51190.1 | chr1:18977517-18980305 FORWARD LENGTH=569 197 1e-50
AT1G72570.1 | chr1:27331381-27333698 FORWARD LENGTH=416 181 7e-46
AT4G37750.1 | chr4:17739782-17742189 FORWARD LENGTH=556 179 2e-45
AT5G10510.3 | chr5:3315991-3320008 FORWARD LENGTH=605 171 6e-43
AT5G65510.1 | chr5:26185829-26189413 FORWARD LENGTH=499 170 1e-42
AT3G54320.1 | chr3:20114809-20118599 FORWARD LENGTH=439 128 4e-30
AT1G16060.1 | chr1:5508563-5511609 FORWARD LENGTH=346 125 5e-29
AT1G79700.2 | chr1:29990440-29993658 REVERSE LENGTH=314 123 2e-28
AT4G36920.1 | chr4:17400998-17403140 FORWARD LENGTH=433 106 2e-23
AT2G28550.3 | chr2:12226168-12228251 REVERSE LENGTH=465 99 3e-21
AT5G67180.1 | chr5:26802119-26803934 REVERSE LENGTH=353 94 8e-20
AT2G41710.3 | chr2:17400274-17402903 REVERSE LENGTH=459 61 9e-10
AT1G36060.1 | chr1:13454718-13455662 REVERSE LENGTH=315 53 2e-07
AT4G27950.1 | chr4:13909732-13910739 REVERSE LENGTH=336 53 2e-07
AT2G20880.1 | chr2:8986053-8987063 FORWARD LENGTH=337 52 4e-07
AT2G39250.1 | chr2:16389010-16390931 REVERSE LENGTH=326 52 5e-07
AT1G03800.1 | chr1:957261-957998 REVERSE LENGTH=246 51 1e-06
AT5G60120.2 | chr5:24208153-24211067 FORWARD LENGTH=508 48 7e-06
>AT3G20840.1 | chr3:7300764-7303370 FORWARD LENGTH=575
Length = 574
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 102/109 (93%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKE+EEMKHMTRQEFVA++RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 251 YEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLY 310
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTFST+ YDIAAIKFRGLNAVTNF+++RYDVK+IL+S+ LP+G
Sbjct: 311 LGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIG 359
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 17 VASLRRKSSGFSRGASIYRGVTRHHQHGRWQA--------RIGRVAGNKDLYLGTFSTQX 68
A+ RR F + SIYRGVTRH GR++A R G+ + +YLG + +
Sbjct: 165 TATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKED 224
Query: 69 XXXXXYDIAAIKFRGLNAVTNFDMSRYD 96
YD+AA+K+ G + TNF ++ Y+
Sbjct: 225 KAARSYDLAALKYWGPSTTTNFPITNYE 252
>AT5G57390.1 | chr5:23253459-23256437 REVERSE LENGTH=559
Length = 558
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/109 (88%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE ELEEMKHMTRQEFVASLRRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 273 YESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLY 332
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTFSTQ YDIAAIKFRGLNAVTNFD+SRYDVKSI S LPVG
Sbjct: 333 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIA-SCNLPVG 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 6 EEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQA--------RIGRVAGNK 57
++ + E + ++ F + SIYRGVTRH GR++A R G+ +
Sbjct: 176 QQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGR 235
Query: 58 DLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYD 96
+YLG + + YD+AA+K+ G TNF +S Y+
Sbjct: 236 QVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYE 274
>AT5G17430.1 | chr5:5742542-5745568 REVERSE LENGTH=585
Length = 584
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 102/110 (92%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKE+EEMKHMTRQE+VASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 280 YEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 339
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGT 110
LGTF TQ YDIAAIKFRGL+AVTNFDM+RY+VK+IL+S +LP+G+
Sbjct: 340 LGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGS 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 2 EKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQA--------RIGRV 53
EK + ++ T ++ + S F + SIYRGVTRH GR++A R G+
Sbjct: 186 EKTIVDVVETTPKKTIES-------FGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQT 238
Query: 54 AGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYD 96
+ +YLG + + YD+AA+K+ G TNF +S Y+
Sbjct: 239 RKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYE 281
>AT1G51190.1 | chr1:18977517-18980305 FORWARD LENGTH=569
Length = 568
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 101/109 (92%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKE+EEMK+MTRQEFVAS+RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 260 YEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLY 319
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTFST+ YDIAAIKFRGLNAVTNF+++RYDVK+IL+S LP+G
Sbjct: 320 LGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIG 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 18 ASLRRKSSGFSRGASIYRGVTRHHQHGRWQA--------RIGRVAGNKDLYLGTFSTQXX 69
A+ RR F + SIYRGVTRH GR++A R G+ + +YLG + +
Sbjct: 175 ATPRRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEK 234
Query: 70 XXXXYDIAAIKFRGLNAVTNFDMSRYD 96
YD+AA+K+ G + TNF ++ Y+
Sbjct: 235 AARAYDLAALKYWGPSTTTNFPITNYE 261
>AT1G72570.1 | chr1:27331381-27333698 FORWARD LENGTH=416
Length = 415
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 92/106 (86%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YEKE+EE+ +M RQEFVA LRR SSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 293 YEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLY 352
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAAL 106
LGTFSTQ YDIAAIKFRGLNAVTNFD++RYDVK I S+ +
Sbjct: 353 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSSTI 398
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 11 MTRQEFVASLRRKS-SGFSRGASIYRGVTRHHQHGRWQARI--------GRVAGNKDLYL 61
+ + + S+ RKS + + S YRGVTRH GR++A + G+ + +YL
Sbjct: 200 VVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYL 259
Query: 62 GTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYD 96
G + + YD+AA+K+ G NF +S Y+
Sbjct: 260 GGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYE 294
>AT4G37750.1 | chr4:17739782-17742189 FORWARD LENGTH=556
Length = 555
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 93/109 (85%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y+KE+E+MK+MTRQE+VA LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY
Sbjct: 353 YQKEIEDMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 412
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTF TQ YD+AAIKFRG NAVTNFD++RYDV I+ S L G
Sbjct: 413 LGTFGTQEEAAEAYDVAAIKFRGTNAVTNFDITRYDVDRIMSSNTLLSG 461
>AT5G10510.3 | chr5:3315991-3320008 FORWARD LENGTH=605
Length = 604
Score = 171 bits (432), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 99/109 (90%), Gaps = 1/109 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y KE+EEMKHMT+QEF+ASLRRKSSGFSRGASIYRGVTRHHQ GRWQARIGRVAGNKDLY
Sbjct: 358 YSKEVEEMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLY 417
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTF+T+ YDIAAIKFRG+NAVTNF+M+RYDV++I+ S ALP+G
Sbjct: 418 LGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKS-ALPIG 465
>AT5G65510.1 | chr5:26185829-26189413 FORWARD LENGTH=499
Length = 498
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 99/109 (90%), Gaps = 1/109 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y KELEEM HMT+QEF+ASLRRKSSGFSRGASIYRGVTRHHQ GRWQARIGRVAGNKDLY
Sbjct: 301 YSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLY 360
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVG 109
LGTF+T+ YDIAAIKFRG+NAVTNF+M+RYD++++++S +LPVG
Sbjct: 361 LGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNS-SLPVG 408
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 31 ASIYRGVTRHHQHGRWQA--------RIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFR 82
SIYRGVTRH GR++A R G+ + +YLG + + YD+AA+K+
Sbjct: 229 TSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYW 288
Query: 83 GLNAVTNFDMSRY 95
G A TNF +S Y
Sbjct: 289 GSTATTNFPVSSY 301
>AT3G54320.1 | chr3:20114809-20118599 FORWARD LENGTH=439
Length = 438
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y KELEEM+ +T++E++ASLRR+SSGFSRG S YRGV RHH +GRW+ARIGRV GNK LY
Sbjct: 135 YTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLY 194
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT++TQ YD+AAI++RG NAVTNFD+S Y
Sbjct: 195 LGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNY 229
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 24 SSGFSRGASIYRGVTRHHQHGRWQARI-GRVAGN-------KDLYLGTFSTQXXXXXXYD 75
S +R +SIYRGVTRH GR++A + + + N K +YLG + ++ YD
Sbjct: 56 SPASTRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYD 115
Query: 76 IAAIKFRGLNAVTNFDMSRY 95
+AA+K+ G + + NF Y
Sbjct: 116 LAALKYWGPDTILNFPAETY 135
>AT1G16060.1 | chr1:5508563-5511609 FORWARD LENGTH=346
Length = 345
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 80/95 (84%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE++++EM+ +++E++ SLRRKSSGFSRG S YRGV +HH +GRW+ARIGRV GNK LY
Sbjct: 128 YEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLY 187
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT++TQ YDIAAI++RGLNAVTNFD+SRY
Sbjct: 188 LGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRY 222
>AT1G79700.2 | chr1:29990440-29993658 REVERSE LENGTH=314
Length = 313
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 80/95 (84%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y+++++EM+ +++E++ SLRRKSSGFSRG S YRGV RHH +GRW+ARIGRV GNK LY
Sbjct: 122 YDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLY 181
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LGT++TQ YDIAAI++RGLNAVTNFD+SRY
Sbjct: 182 LGTYATQEEAAIAYDIAAIEYRGLNAVTNFDVSRY 216
>AT4G36920.1 | chr4:17400998-17403140 FORWARD LENGTH=433
Length = 432
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y+ +L++M ++T++EFV LRR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +Y
Sbjct: 191 YDDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVY 249
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPV 108
LG F T+ YD AAIK G +AVTNFD S YD + +S+ P
Sbjct: 250 LGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYDEELNAESSGNPT 297
>AT2G28550.3 | chr2:12226168-12228251 REVERSE LENGTH=465
Length = 464
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
YE++++++++++++EFV LRR+S+GFSRG+S YRGVT H+ GRW+AR+G+ G K +Y
Sbjct: 213 YEEDMKQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVT-LHKCGRWEARMGQFLGKKYIY 271
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
LG F ++ YD AAI G AVTNF+MS Y
Sbjct: 272 LGLFDSEVEAARAYDKAAINTNGREAVTNFEMSSY 306
>AT5G67180.1 | chr5:26802119-26803934 REVERSE LENGTH=353
Length = 352
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Y +L++M ++T++EF+ LRR+S+GF RG+S YRGVT H+ GRW++R+G+ K +Y
Sbjct: 156 YLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVT-LHKCGRWESRLGQFLNKKYVY 214
Query: 61 LGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVKSILDS 103
LG F T+ YD AAIK G +AVTNFD Y+ + L S
Sbjct: 215 LGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSS 257
>AT2G41710.3 | chr2:17400274-17402903 REVERSE LENGTH=459
Length = 458
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAG 55
Y ++LEEM++++R+E++ASLRRKSSGFSRG + YRG+ RW A R+ G
Sbjct: 175 YTRDLEEMQNLSREEYLASLRRKSSGFSRGIAKYRGL-----QSRWDASASRMPG 224
>AT1G36060.1 | chr1:13454718-13455662 REVERSE LENGTH=315
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 16 FVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYD 75
F+ S S+ A +YRGV + H G+W A I L+LGTF T YD
Sbjct: 125 FMTQPGPSSGSVSKPAKLYRGVRQRH-WGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYD 183
Query: 76 IAAIKFRGLNAVTNFDMSRYDVKS 99
AA K RG +A NF RY S
Sbjct: 184 RAAFKLRGDSARLNFPALRYQTGS 207
>AT4G27950.1 | chr4:13909732-13910739 REVERSE LENGTH=336
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 17 VASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDI 76
V S +K S + YRGV R G+W A I + ++LGTF+T YD
Sbjct: 101 VDSTVQKPSVSGQNQKKYRGV-RQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDN 159
Query: 77 AAIKFRGLNAVTNF 90
AAIK RG +A+TNF
Sbjct: 160 AAIKLRGPDALTNF 173
>AT2G20880.1 | chr2:8986053-8987063 FORWARD LENGTH=337
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 8 MKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ 67
M +M RQE L R +YRGV + H G+W A I + L+LGTF T
Sbjct: 161 MMNMLRQESDLPLTRPPVQPFSATKLYRGVRQRH-WGKWVAEIRKPRNRTRLWLGTFDTA 219
Query: 68 XXXXXXYDIAAIKFRGLNAVTNF 90
YD A K RG A NF
Sbjct: 220 EEAAMAYDREAFKLRGETARLNF 242
>AT2G39250.1 | chr2:16389010-16390931 REVERSE LENGTH=326
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 34 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMS 93
YRGVT + + GRW++ I K +YLG F T YD AAI+FRGL A NF +
Sbjct: 109 YRGVTFYRRTGRWESHIWDCG--KQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIVD 166
Query: 94 RY 95
Y
Sbjct: 167 DY 168
>AT1G03800.1 | chr1:957261-957998 REVERSE LENGTH=246
Length = 245
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 3 KELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLG 62
KE+ + R+ +L G YRGV R GR+ A I K ++LG
Sbjct: 22 KEVSDKGVKKRKNVTKALAVNDGGEKSKEVRYRGV-RRRPWGRYAAEIRDPVKKKRVWLG 80
Query: 63 TFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRY 95
+F+T YD AAI+FRG A TNF + Y
Sbjct: 81 SFNTGEEAARAYDSAAIRFRGSKATTNFPLIGY 113
>AT5G60120.2 | chr5:24208153-24211067 FORWARD LENGTH=508
Length = 507
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGN 56
YE++L++M +++++E V LRR+SSGFSR S Y+GV + G W A++ ++ GN
Sbjct: 220 YEEDLKQMANLSKEEVVQVLRRQSSGFSRNNSRYQGVAL-QKIGGWGAQMEQLHGN 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,441,663
Number of extensions: 115383
Number of successful extensions: 386
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 384
Number of HSP's successfully gapped: 36
Length of query: 343
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 244
Effective length of database: 8,392,385
Effective search space: 2047741940
Effective search space used: 2047741940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)