BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0897700 Os01g0897700|AK061290
(244 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25500.1 | chr3:9251320-9254826 REVERSE LENGTH=1052 293 7e-80
AT2G43800.1 | chr2:18145721-18148721 FORWARD LENGTH=895 200 7e-52
AT5G67470.1 | chr5:26926835-26930212 FORWARD LENGTH=900 190 6e-49
AT5G48360.1 | chr5:19595716-19598331 FORWARD LENGTH=783 149 1e-36
AT3G05470.1 | chr3:1579667-1582547 REVERSE LENGTH=885 139 1e-33
AT5G54650.1 | chr5:22197856-22201649 REVERSE LENGTH=901 132 2e-31
AT3G07540.1 | chr3:2404763-2407464 REVERSE LENGTH=842 116 9e-27
AT1G59910.1 | chr1:22054167-22057052 REVERSE LENGTH=930 111 4e-25
AT4G15200.1 | chr4:8662993-8665759 REVERSE LENGTH=765 110 6e-25
AT1G70140.1 | chr1:26412688-26415048 REVERSE LENGTH=761 109 1e-24
AT1G24150.1 | chr1:8549518-8551910 FORWARD LENGTH=726 104 4e-23
>AT3G25500.1 | chr3:9251320-9254826 REVERSE LENGTH=1052
Length = 1051
Score = 293 bits (749), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 171/222 (77%), Gaps = 9/222 (4%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RGDAHAF G DGKTTLLHFVVQEIIR EG+ LS +N T D
Sbjct: 807 RGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRAEGTRLSGNNTQT---------D 857
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
+++C+KLGLQVV+ L +ELSNVKKAAAMDS+VLSSYVSKL+ GI KI E +++ +
Sbjct: 858 DIKCRKLGLQVVSSLCSELSNVKKAAAMDSEVLSSYVSKLSQGIAKINEAIQVQSTITEE 917
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
++ RF +SM+ FLKRA+++IIRVQAQESVALSLVKEITEYFHG+SAKEEAHPFRIF+VV
Sbjct: 918 SNSQRFSESMKTFLKRAEEEIIRVQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFLVV 977
Query: 181 RDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQLFP 222
RDFL V+D+VCKEVG IN+RT+ SS FPVPVNPMMPQ P
Sbjct: 978 RDFLGVVDRVCKEVGMINERTMVSSAHKFPVPVNPMMPQPLP 1019
>AT2G43800.1 | chr2:18145721-18148721 FORWARD LENGTH=895
Length = 894
Score = 200 bits (508), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 146/228 (64%), Gaps = 11/228 (4%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHL----SASNQSTPRTQAN 56
RGDAHAF G DGKTTLLHFVVQEII+ EG+ + S S+ + +
Sbjct: 654 RGDAHAFKLDTLLKLVDIKGADGKTTLLHFVVQEIIKFEGARVPFTPSQSHIGDNMAEQS 713
Query: 57 PLRDELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEE 116
+D+LE KKLGLQVV+GL ++L NVKKAAAMDS+ L + +++A GI K+ EV+ E
Sbjct: 714 AFQDDLELKKLGLQVVSGLSSQLINVKKAAAMDSNSLINETAEIARGIAKVKEVIT---E 770
Query: 117 VKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRI 176
+K RF +SM FL + + +I +Q+ + +VKE+TEYFHG+S E HPFRI
Sbjct: 771 LKQETGVERFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYFHGNS---ETHPFRI 827
Query: 177 FMVVRDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQLFPRI 224
F VVRDFL++LDQVCKEVGR+N+RT+ S+ P N LFP +
Sbjct: 828 FAVVRDFLTILDQVCKEVGRVNERTVYGSMP-LHSPSNQTATPLFPVV 874
>AT5G67470.1 | chr5:26926835-26930212 FORWARD LENGTH=900
Length = 899
Score = 190 bits (482), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 140/223 (62%), Gaps = 16/223 (7%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RGDA AF G DGKTTLLHFVVQEI R+EG+ +T + + +
Sbjct: 668 RGDAIAFKLDTLLKLVDIKGVDGKTTLLHFVVQEITRSEGT-------TTTKDETILHGN 720
Query: 61 ELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSR 120
+K GLQVVAGL +L NVKK+A MD DVLSSYV+KL G++K+ L K+
Sbjct: 721 NDGFRKQGLQVVAGLSRDLVNVKKSAGMDFDVLSSYVTKLEMGLDKLRSFL------KTE 774
Query: 121 EDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
RF DSM+ FLK A+++I +++ E ALS+VKE+TEYFHG++A+EEAHP RIFMVV
Sbjct: 775 TTQGRFFDSMKTFLKEAEEEIRKIKGGERKALSMVKEVTEYFHGNAAREEAHPLRIFMVV 834
Query: 181 RDFLSVLDQVCKEVGRINDRTI---ASSVRHFPVPVNPMMPQL 220
RDFL VLD VCKEV + + + ++S R F + +P L
Sbjct: 835 RDFLGVLDNVCKEVKTMQEMSTSMGSASARSFRISATASLPVL 877
>AT5G48360.1 | chr5:19595716-19598331 FORWARD LENGTH=783
Length = 782
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 120/195 (61%), Gaps = 26/195 (13%)
Query: 2 GDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRDE 61
GDA AF G DG+++LLHFVVQE++++EGS +R
Sbjct: 612 GDADAFKLDTLLKLVDVKGLDGRSSLLHFVVQEMMKSEGS----------------VR-- 653
Query: 62 LECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSRE 121
L+ + L ELSNVKK+A ++ VL S VS++ G++ I +L L+EE S
Sbjct: 654 ------ALEGIRNLNTELSNVKKSADIEYGVLRSNVSRICQGLKNIEALLLLSEESGSYG 707
Query: 122 DAW-RFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 180
D W +F + M +FLK A ++I++++ +ES LS ++E+TE FHGD++K E H RIFM+V
Sbjct: 708 DQWLKFKERMTRFLKTAAEEIVKIKIRESSTLSALEEVTEQFHGDASK-EGHTMRIFMIV 766
Query: 181 RDFLSVLDQVCKEVG 195
RDFLSVLDQVCKE+G
Sbjct: 767 RDFLSVLDQVCKEMG 781
>AT3G05470.1 | chr3:1579667-1582547 REVERSE LENGTH=885
Length = 884
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSAS------NQSTPRTQ 54
RG A AF GTDGKTTLLHFVVQEI R+EG +S S NQ + + +
Sbjct: 672 RGGAKAFKLDALLKLSDVKGTDGKTTLLHFVVQEISRSEGIRVSDSIMGRIMNQRSNKNR 731
Query: 55 ANPLRDELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLN 114
P E + +++GL +V+GL EL NVKK A +D + L + VS L G+ +++ + +
Sbjct: 732 T-PEEKEEDYRRMGLDLVSGLNTELRNVKKTATIDLEGLVTSVSNLRDGLGQLSCLA--S 788
Query: 115 EEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPF 174
E++K E+ F SM FL+ + + ++ E + V EI EYFHGD +E +P
Sbjct: 789 EKLKGDEENRAFVSSMSSFLRYGEKSLEELREDEKRIMERVGEIAEYFHGDVRGDEKNPL 848
Query: 175 RIFMVVRDFLSVLDQVCKEV 194
RIF++VRDFL +LD VC+E+
Sbjct: 849 RIFVIVRDFLGMLDHVCREL 868
>AT5G54650.1 | chr5:22197856-22201649 REVERSE LENGTH=901
Length = 900
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 131/249 (52%), Gaps = 25/249 (10%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRD 60
RG A AF GTDGKTTLLHFVVQEIIRTEG + + + + + D
Sbjct: 647 RGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAARTIRESQSFSSVKTED 706
Query: 61 EL----------ECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEV 110
L + LGL+ V+GL +EL +VKK+A +D+D L+ V K+ + K +
Sbjct: 707 LLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDF 766
Query: 111 LRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEE 170
+N E+KS + F ++++ F++ A+ I+ + +E ++LVK +YFHG + K+E
Sbjct: 767 --VNSEMKSSGEESGFREALEDFIQNAEGSIMSILEEEKRIMALVKSTGDYFHGKAGKDE 824
Query: 171 AHPFRIFMVVRDFLSVLDQVCKEVGRINDRTI---------ASSVRHFPVPVNPMMP--Q 219
R+F++VRDFL +LD+ CKEV R + AS+ P + P +
Sbjct: 825 G--LRLFVIVRDFLIILDKSCKEVREARGRPVRMARKQGSTASASSETPRQTPSLDPRQK 882
Query: 220 LFPRIHALR 228
LFP I R
Sbjct: 883 LFPAITERR 891
>AT3G07540.1 | chr3:2404763-2407464 REVERSE LENGTH=842
Length = 841
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 27/195 (13%)
Query: 2 GDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRDE 61
G+AH F +DG+T++L VVQ+I +EG
Sbjct: 665 GNAHDFKLEALLGLVDIKSSDGRTSILDSVVQKITESEGIK------------------- 705
Query: 62 LECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSRE 121
GLQVV L + L++ KK+A +D V+ VSKL ++KI+EVLRL EE E
Sbjct: 706 ------GLQVVRNLSSVLNDAKKSAELDYGVVRMNVSKLYEEVQKISEVLRLCEETGHSE 759
Query: 122 D--AWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMV 179
+ W+F +S+ +FL+ A ++I +++ +E L VK+ITEYFH D AKEEA ++F++
Sbjct: 760 EHQWWKFRESVTRFLETAAEEIKKIEREEGSTLFAVKKITEYFHVDPAKEEAQLLKVFVI 819
Query: 180 VRDFLSVLDQVCKEV 194
VRDFL +L+ VCK++
Sbjct: 820 VRDFLKILEGVCKKM 834
>AT1G59910.1 | chr1:22054167-22057052 REVERSE LENGTH=930
Length = 929
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 110/201 (54%), Gaps = 13/201 (6%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEG-------SHLSASNQSTPRT 53
RG+A AF D KTTLLHFVV+E++R+EG + +S+ N S
Sbjct: 671 RGNAQAFNLTALRKLSDVKSVDAKTTLLHFVVEEVVRSEGKRAAMNKNMMSSDNGSGENA 730
Query: 54 QANPLRDELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRL 113
+ E+E K+GL ++ GL +E +NVKKAA +D D S+V+ ++ E RL
Sbjct: 731 DMSREEQEIEFIKMGLPIIGGLSSEFTNVKKAAGIDYD---SFVATTLALGTRVKETKRL 787
Query: 114 NEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHP 173
++ K +ED ++ F + A++++ + ++ + LVK+ T Y+ + KE +
Sbjct: 788 LDQSKGKEDGCL--TKLRSFFESAEEELKVITEEQLRIMELVKKTTNYYQAGALKER-NL 844
Query: 174 FRIFMVVRDFLSVLDQVCKEV 194
F++F+++RDFL ++D C E+
Sbjct: 845 FQLFVIIRDFLGMVDNACSEI 865
>AT4G15200.1 | chr4:8662993-8665759 REVERSE LENGTH=765
Length = 764
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 28/204 (13%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEGS---HLSASNQSTPRTQANP 57
RGDA AF GTDGKTTLLHFVV EIIR+EG L + + S+ +T +
Sbjct: 536 RGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSN 595
Query: 58 LRDELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEV 117
+LE +VK+AA +D+D L++ ++ ++G + E L
Sbjct: 596 ADSKLE-----------------DVKRAAIIDADGLAATLANISGSLTNAREFL------ 632
Query: 118 KSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIF 177
K+ ++ F ++ F++RAD D ++ +E + LVK +YFHG SAK E R+F
Sbjct: 633 KTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEG--LRLF 690
Query: 178 MVVRDFLSVLDQVCKEVGRINDRT 201
+VRDFL +L++VC+EV T
Sbjct: 691 AIVRDFLIMLEKVCREVKETTKTT 714
>AT1G70140.1 | chr1:26412688-26415048 REVERSE LENGTH=761
Length = 760
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 25/230 (10%)
Query: 1 RGDAHAFXXXXXXXXXXXXGTDGKTTLLHFVVQEIIRTEG--------SH-LSASNQSTP 51
RG+A AF DGKT+LL+FVV+E++R+EG SH L+ S S
Sbjct: 509 RGNAQAFNLTALLKLSDVKSVDGKTSLLNFVVEEVVRSEGKRCVMNRRSHSLTRSGSSNY 568
Query: 52 RTQANPLR------DELECKKLGLQVVAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIE 105
+ L+ E E KLGL VV GL +E SNVKKAA +D + + + S LA +
Sbjct: 569 NGGNSSLQVMSKEEQEKEYLKLGLPVVGGLSSEFSNVKKAACVDYETVVATCSALAVRAK 628
Query: 106 KITEVLRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGD 165
V+ E+ + RF +M FL ++++ + +E + LVK T+Y+
Sbjct: 629 DAKTVIGECED----GEGGRFVKTMMTFLDSVEEEVKIAKGEERKVMELVKRTTDYYQAG 684
Query: 166 SAKEEAHPFRIFMVVRDFLSVLDQVCKEVGRINDRTIASSVRHFPVPVNP 215
+ + +P +F++VRDFL+++D+VC ++ R R R P++P
Sbjct: 685 AVTKGKNPLHLFVIVRDFLAMVDKVCLDIMRNMQR------RKVGSPISP 728
>AT1G24150.1 | chr1:8549518-8551910 FORWARD LENGTH=726
Length = 725
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 14/211 (6%)
Query: 22 DGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPL----------RDELECKKLGLQV 71
DGKTTLL+FVV+E++R+EG + ++ + E E +LGL V
Sbjct: 502 DGKTTLLNFVVEEVVRSEGKRCVLNRRTNRSFSRSSSSSISEVISKEEQEKEYLRLGLPV 561
Query: 72 VAGLGNELSNVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSREDAWRFHDSMQ 131
V GL +E +NVKKAAA+D D +++ L + VL +E ++ RF M
Sbjct: 562 VGGLSSEFTNVKKAAAVDYDTVAATCLALTSRAKDARRVLAQSE--GDNKEGVRFVKKMN 619
Query: 132 KFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVVRDFLSVLDQVC 191
+FL ++++ + +E L LVK TEY+ + K + +P +F++VRDFL+++D+VC
Sbjct: 620 EFLDSVEEEVKLAKEEEKKVLELVKRTTEYYQAGAVKGK-NPLHLFVIVRDFLAMVDKVC 678
Query: 192 KEVGR-INDRTIASSVRHFPVPVNPMMPQLF 221
E+ R + R+ S + P++P F
Sbjct: 679 VEIARNLQRRSSMGSTQQRNAVKFPVLPPNF 709
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,416,922
Number of extensions: 162880
Number of successful extensions: 546
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 519
Number of HSP's successfully gapped: 11
Length of query: 244
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 148
Effective length of database: 8,474,633
Effective search space: 1254245684
Effective search space used: 1254245684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)