BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0894300 Os01g0894300|AK060500
(323 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31390.1 | chr2:13383635-13386116 REVERSE LENGTH=326 475 e-134
AT1G06030.1 | chr1:1826880-1828130 FORWARD LENGTH=330 473 e-134
AT1G06020.1 | chr1:1824548-1826101 FORWARD LENGTH=346 473 e-134
AT3G59480.1 | chr3:21983103-21984440 FORWARD LENGTH=327 464 e-131
AT4G10260.1 | chr4:6371486-6372770 REVERSE LENGTH=325 416 e-117
AT5G51830.1 | chr5:21069709-21071450 FORWARD LENGTH=344 414 e-116
AT1G66430.1 | chr1:24778400-24780393 FORWARD LENGTH=385 410 e-115
AT1G50390.1 | chr1:18666986-18667677 REVERSE LENGTH=147 188 4e-48
AT3G54090.1 | chr3:20028145-20029835 FORWARD LENGTH=472 172 2e-43
AT1G69200.1 | chr1:26016018-26018365 FORWARD LENGTH=617 158 3e-39
AT1G17160.1 | chr1:5867678-5869215 FORWARD LENGTH=380 78 5e-15
AT1G06730.1 | chr1:2067633-2070049 FORWARD LENGTH=489 61 7e-10
AT5G58730.1 | chr5:23723627-23725324 REVERSE LENGTH=354 50 1e-06
>AT2G31390.1 | chr2:13383635-13386116 REVERSE LENGTH=326
Length = 325
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/319 (70%), Positives = 268/319 (84%)
Query: 3 GRSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLG 62
G L+VSFGEMLIDFVPT +GVSLAEAP F+KAPGGAPANVAIAV+RLGG +AFVGKLG
Sbjct: 5 GDKGLIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLG 64
Query: 63 DDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHA 122
DDEFG MLA ILR FD GARTALAFVTLRADG+REFMFYRNPSADMLL
Sbjct: 65 DDEFGHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLLRPD 124
Query: 123 ELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEA 182
ELN++LI+ A VFHYGSISLI EPCRSAHL+AME+AKEAGALLSYDPNLRE LWPS+EEA
Sbjct: 125 ELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEA 184
Query: 183 RTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYAR 242
+T+I+SIWD+A+I+KVS+VELEFLTG + ++D+ + LW P +KLLLVTLG++GC+YY +
Sbjct: 185 KTQIMSIWDKAEIIKVSDVELEFLTGSNKIDDETALTLWHPNLKLLLVTLGEKGCRYYTK 244
Query: 243 DFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITAT 302
F+GAV + V VDTTGAGD+FVGALL +IV D S L+D+++L + ++FANACGAIT T
Sbjct: 245 TFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTT 304
Query: 303 KKGAIPSLPTEVEVLKLME 321
KKGAIP+LP++ EV +E
Sbjct: 305 KKGAIPALPSDAEVRSFLE 323
>AT1G06030.1 | chr1:1826880-1828130 FORWARD LENGTH=330
Length = 329
Score = 473 bits (1218), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/315 (70%), Positives = 264/315 (83%)
Query: 7 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 66
LVVSFGEMLIDFVPT +GVSL+E+ F+KAPGGAPANVAIAV+RLGG AAFVGKLGDDEF
Sbjct: 11 LVVSFGEMLIDFVPTESGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEF 70
Query: 67 GRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNV 126
G MLA ILR FD GARTALAFVTLR+DGEREFMFYRNPSADMLL ELN+
Sbjct: 71 GHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNL 130
Query: 127 ELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKI 186
ELI+ A VFHYGSISLI EPCRSAH++AME+AKEAGALLSYDPNLRE LWPS EEAR +I
Sbjct: 131 ELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQI 190
Query: 187 LSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRG 246
+SIWD+ADI+KVS+VELEFLTG +++D+ M LW P +KLLLVTLG+ GC+YY +DF G
Sbjct: 191 MSIWDKADIIKVSDVELEFLTGNKTIDDETAMSLWHPNLKLLLVTLGENGCRYYTKDFHG 250
Query: 247 AVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGA 306
+V ++ V VDTTGAGD+FVGALL +IV D S L+++++L + ++FANACGAIT TKKGA
Sbjct: 251 SVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGA 310
Query: 307 IPSLPTEVEVLKLME 321
IP+LPT+ E L ++
Sbjct: 311 IPALPTDCEALSFLK 325
>AT1G06020.1 | chr1:1824548-1826101 FORWARD LENGTH=346
Length = 345
Score = 473 bits (1217), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/319 (69%), Positives = 266/319 (83%)
Query: 3 GRSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLG 62
G L+VSFGEMLIDFVPTV+GVSL+E+P F+KAPGGAPANVAIAV+RLGG AAFVGKLG
Sbjct: 6 GEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLG 65
Query: 63 DDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHA 122
DD+FG MLA ILR FD GARTALAFVTLR+DGEREFMFYRNPSADMLL
Sbjct: 66 DDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPD 125
Query: 123 ELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEA 182
ELN+ELI+ A VFHYGSISLI EPCRSAH++AME+AKEAGALLSYDPNLRE LWPS EEA
Sbjct: 126 ELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEA 185
Query: 183 RTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYAR 242
RT+I+SIWD+ADI+KVS+VELEFLT +++D M LW P +KLLLVTLG++GC Y+ +
Sbjct: 186 RTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAMSLWHPNLKLLLVTLGEKGCTYFTK 245
Query: 243 DFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITAT 302
F G+V ++ V VDTTGAGD+FVGALL++IV D S L+D+ +L + ++FANACGAIT T
Sbjct: 246 KFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTT 305
Query: 303 KKGAIPSLPTEVEVLKLME 321
KKGAIP+LPT++E L ++
Sbjct: 306 KKGAIPALPTDIEALSFLK 324
>AT3G59480.1 | chr3:21983103-21984440 FORWARD LENGTH=327
Length = 326
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/319 (68%), Positives = 263/319 (82%)
Query: 3 GRSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLG 62
G L+VSFGEMLIDFVPTV+GVSLA+AP F+KAPGGAPANVAIA++RLGG AAFVGKLG
Sbjct: 6 GEKSLIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLG 65
Query: 63 DDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHA 122
DDEFG MLA IL+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL
Sbjct: 66 DDEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLLRPD 125
Query: 123 ELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEA 182
ELN+++I+ A VFHYGSISLI EPCRSAHL+AME+AKEAGALLSYDPNLR LWPS+EEA
Sbjct: 126 ELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEA 185
Query: 183 RTKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYAR 242
+ +ILSIWD+A+++KVS+ EL FLTG D V+D+ + LW +KLLLVTLG++GC+YY +
Sbjct: 186 QKQILSIWDKAEVIKVSDEELMFLTGSDKVDDETALSLWHSNLKLLLVTLGEKGCRYYTK 245
Query: 243 DFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITAT 302
FRG+V + V VDTTGAGD+FVGALL +IV D + L+D+ +L E ++ ANACGAIT T
Sbjct: 246 SFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTT 305
Query: 303 KKGAIPSLPTEVEVLKLME 321
KKGAIP+LPTE EV L++
Sbjct: 306 KKGAIPALPTESEVQSLLK 324
>AT4G10260.1 | chr4:6371486-6372770 REVERSE LENGTH=325
Length = 324
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/319 (62%), Positives = 246/319 (77%)
Query: 4 RSELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGD 63
+ L+VSFGEMLIDFVP +GVSLAE+ F+KAPGGAPANVA A+ +LGG +AF+GK GD
Sbjct: 3 NTPLIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGD 62
Query: 64 DEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAE 123
DEFG ML IL+ FD ARTALAFVTL+ DGEREFMFYRNPSADMLL +E
Sbjct: 63 DEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESE 122
Query: 124 LNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEAR 183
LN +LIK+A +FHYGSISLI+EPCR+AH+ AM+ AK+AG LLSYDPN+R LWPS E A
Sbjct: 123 LNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAI 182
Query: 184 TKILSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243
I SIW++ADI+KVS+ E+ FLT D+ +DDVV+ L +KLL+VT G++GC+YY +
Sbjct: 183 EGIKSIWNEADIIKVSDDEVTFLTRGDAEKDDVVLSLMHDKLKLLIVTDGEKGCRYYTKK 242
Query: 244 FRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATK 303
F+G VP Y V+ VDTTGAGD+FVGA L + +D S L D+ KL+EA+ FANACGA+ T+
Sbjct: 243 FKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQ 302
Query: 304 KGAIPSLPTEVEVLKLMES 322
KGAIP+LPT + KLM+S
Sbjct: 303 KGAIPALPTPADAQKLMKS 321
>AT5G51830.1 | chr5:21069709-21071450 FORWARD LENGTH=344
Length = 343
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/318 (63%), Positives = 246/318 (77%), Gaps = 2/318 (0%)
Query: 7 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 66
LVV FGEMLIDFVPTV GVSLAEAPAF KAPGGAPANVA+ V+RLGG +AF+GK+GDDEF
Sbjct: 23 LVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGVSRLGGSSAFIGKVGDDEF 82
Query: 67 GRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNV 126
GRMLA ILR FD ARTALAFVTLR DGEREF+F+R+PSADMLL +EL+
Sbjct: 83 GRMLADILRLNNVDNSGMRFDHNARTALAFVTLRGDGEREFLFFRHPSADMLLLESELDK 142
Query: 127 ELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKI 186
LI++A +FHYGSISLI EPCRS L AM+IAK AG+LLSYDPNLR LWPS E AR +I
Sbjct: 143 NLIQKAKIFHYGSISLIEEPCRSTQLVAMKIAKAAGSLLSYDPNLRLPLWPSEEAARKEI 202
Query: 187 LSIWDQADIVKVSEVELEFLTGIDSVEDD--VVMKLWRPTMKLLLVTLGDQGCKYYARDF 244
+SIW+ AD++K+SE E+ FLTG D DD V+ KL+ P +KLL+V+ G GC+YY ++F
Sbjct: 203 MSIWNLADVIKISEDEITFLTGGDDPYDDDVVLQKLFHPNLKLLVVSEGPNGCRYYTQEF 262
Query: 245 RGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKK 304
+G V KV+ VDTTGAGDAFV LL + D + L+D+KKL EA+ FANACGAIT T++
Sbjct: 263 KGRVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANACGAITVTER 322
Query: 305 GAIPSLPTEVEVLKLMES 322
GAIP++P+ V L+ S
Sbjct: 323 GAIPAMPSMDAVQDLLSS 340
>AT1G66430.1 | chr1:24778400-24780393 FORWARD LENGTH=385
Length = 384
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/310 (63%), Positives = 242/310 (78%), Gaps = 1/310 (0%)
Query: 5 SELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDD 64
S VV FGEMLIDFVPT +G+SLA+APAF KAPGGAPANVA+ +ARLGG +AF+GK+G+D
Sbjct: 63 SPYVVCFGEMLIDFVPTTSGLSLADAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGED 122
Query: 65 EFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAEL 124
EFG MLA IL+ FD GARTALAFVTL +GEREFMFYRNPSADMLL +EL
Sbjct: 123 EFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEGEREFMFYRNPSADMLLEESEL 182
Query: 125 NVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEART 184
+ +LIK+A +FHYGSISLI EPC+SAH+ A + AKEAG +LSYDPNLR LWPS + AR
Sbjct: 183 DFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGVILSYDPNLRLPLWPSADNARE 242
Query: 185 KILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243
+ILSIW+ ADI+K+SE E+ FLT G D +D+VV KL+ P +KLLLVT G +GC+YY +D
Sbjct: 243 EILSIWETADIIKISEEEIVFLTKGEDPYDDNVVRKLFHPKLKLLLVTEGPEGCRYYTKD 302
Query: 244 FRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATK 303
F G V KV VDTTGAGDAFV +L ++ D S LQD+++L EA+ FANACGA+T
Sbjct: 303 FSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQDEERLREALMFANACGALTVKV 362
Query: 304 KGAIPSLPTE 313
+GAIP+LPT+
Sbjct: 363 RGAIPALPTK 372
>AT1G50390.1 | chr1:18666986-18667677 REVERSE LENGTH=147
Length = 146
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 119/170 (70%), Gaps = 29/170 (17%)
Query: 152 LRAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDS 211
++A E AKEAGALLSYDPNLRE LWPS EEART+I+SIWD+ADI+K
Sbjct: 1 MKATEEAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIK-------------- 46
Query: 212 VEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLR 271
LLLVTLG++GC+YY +DF G+V ++ V VDTTGAGD+FVGALL
Sbjct: 47 ---------------LLLVTLGEKGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLN 91
Query: 272 RIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLME 321
+IV D S L+++++L + ++ ANACGAIT TKKGAIP+LPT+ E L ++
Sbjct: 92 QIVDDQSVLEEEERLRKVLRIANACGAITTTKKGAIPALPTDCEALSFLK 141
>AT3G54090.1 | chr3:20028145-20029835 FORWARD LENGTH=472
Length = 471
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 171/363 (47%), Gaps = 48/363 (13%)
Query: 7 LVVSFGEMLIDFVPTVA--------------GVSLAEAPAFVKAPGGAPANVAIAVARLG 52
LV FG + +FVP V + + P F +APGG P+NVAI+ RLG
Sbjct: 103 LVCCFGAVQKEFVPVVRVHDNPMHPDMYSQWKMLQWDPPEFGRAPGGPPSNVAISHVRLG 162
Query: 53 GGAAFVGKLGDDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLR-ADGEREFMFYR 111
G AAF+GK+G+D+FG L ++ FD ++TA V ++ DG+ +
Sbjct: 163 GRAAFMGKVGEDDFGDELVLMMNQERVQTRAVKFDENSKTACTRVKIKFKDGKMMAETVK 222
Query: 112 NPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNL 171
P D L +ELN+ ++K A +FH+ S L + +S A++ +K+ G L+ +D NL
Sbjct: 223 EPPEDSLFA-SELNLAVLKEARIFHFNSEVLTSPTMQSTLFTAIQWSKKFGGLIFFDLNL 281
Query: 172 REALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVE------------------ 213
LW SR E R I W++A+I++VS+ ELEFL D E
Sbjct: 282 PLPLWRSRNETRKLIKKAWNEANIIEVSQQELEFLLDEDYYERRRNYTPQYFAEDFDQTK 341
Query: 214 ---------DDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQV-----DTT 259
+ + LW +KLL+VT G YY F G V + + D T
Sbjct: 342 NRRDYYHYTPEEIKSLWHDKLKLLVVTDGTLRLHYYTPTFDGVVIGTEDVLITPFTCDRT 401
Query: 260 GAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKL 319
G+GDA V ++R++ P +DQ +E ++FA A G I GA+ PTE L
Sbjct: 402 GSGDAVVAGIMRKLTTCPEMFEDQDVMERQLRFAVAAGIIAQWTIGAVRGFPTESATQNL 461
Query: 320 MES 322
E
Sbjct: 462 KEQ 464
>AT1G69200.1 | chr1:26016018-26018365 FORWARD LENGTH=617
Length = 616
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 166/332 (50%), Gaps = 36/332 (10%)
Query: 3 GRSELVVSFGEMLIDFVPT------VAGVSLAE-------AP-AFVKAPGGAPANVAIAV 48
G LV FG FVP+ + L E AP +++APGG VAIA+
Sbjct: 204 GWPPLVCCFGSAQHAFVPSGRPANRLLDYELHERMRDAKWAPEKYIRAPGGCAGGVAIAL 263
Query: 49 ARLGGGAAFVGKLGDDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVTLRADGEREFM 108
A LGG AF+GKLG D++G+ + L D TA + + + G +
Sbjct: 264 ASLGGKVAFMGKLGADDYGQAMLYYLNVCKVQTRSVKIDGKRVTACSTMKISKRGRLKST 323
Query: 109 FYRNPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYD 168
+ P A+ L+ +E+NV+++K A +F++ + SL+ + S ++A++I+K+ G ++ YD
Sbjct: 324 CIK-PCAEDSLSKSEINVDVLKEAKMFYFSTHSLLDKKMMSTTIQAIKISKQLGNVIFYD 382
Query: 169 PNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSVED-------------- 214
NL LW S EE ++ I +W+ AD++++++ ELEFL GI+ E+
Sbjct: 383 LNLPLPLWHSSEETKSFIQEVWNLADVIEITKQELEFLCGIEPTEEFDTENNDISKFVHY 442
Query: 215 --DVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQV-----DTTGAGDAFVG 267
+ V +LW +K+L VT G YY ++ GAV + + D + +GD V
Sbjct: 443 PPETVEQLWHENLKVLFVTNGTSKIHYYTKEHNGAVSGMEDVPITPFTRDMSASGDGIVA 502
Query: 268 ALLRRIVQDPSSLQDQKKLEEAIKFANACGAI 299
L+R + P + ++ LE ++A CG I
Sbjct: 503 GLIRMLTVQPDLMNNKGYLERTARYAIECGII 534
>AT1G17160.1 | chr1:5867678-5869215 FORWARD LENGTH=380
Length = 379
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 38 GGAPANVAIAVARLGGGAAFVGKLGDDEFGRMLAAILRXXXXXXXXXXFDA--GARTALA 95
GG AN A A+L FVG+LG+D G+++A L + T A
Sbjct: 105 GGKGANQAACGAKLMYPTYFVGRLGEDAHGKLIAEALGDDGCGVHLDYVRSVNNEPTGHA 164
Query: 96 FVTLRADGEREFMFYRNPSADMLL---THAELNVELIKRAAVFHYGSISLIAEPCRSAHL 152
V L++DG+ + A+M ++ ++E+++ A G + L E S ++
Sbjct: 165 VVMLQSDGQNSIIIVG--GANMKAWPEIMSDDDLEIVRNA-----GIVLLQREIPDSINI 217
Query: 153 RAMEIAKEAGALLSYDPNLREALWPSREEARTKILSIWDQADIVKVSEVELEFLTGIDSV 212
+ + K+AG + D + P+ + D DI+ +E EL LTG+ +
Sbjct: 218 QVAKAVKKAGVPVILDVGGMDTPIPNE---------LLDSIDILSPNETELSRLTGMPTE 268
Query: 213 E----DDVVMKLWRPTMKLLLVTLGDQGCKYYARDFR----GAVPSYKVQQVDTTGAGDA 264
V K + +K +LV LG +G + + + +P+ +V VDTTGAGD
Sbjct: 269 TFEQISQAVAKCHKLGVKQVLVKLGSKGSALFIQGEKPIQQSIIPAAQV--VDTTGAGDT 326
Query: 265 FVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLME 321
F A +V+ K EE ++FA A ++ KGAIPS+P VLKL++
Sbjct: 327 FTAAFAVAMVEG-------KSHEECLRFAAAAASLCVQVKGAIPSMPDRKSVLKLLK 376
>AT1G06730.1 | chr1:2067633-2070049 FORWARD LENGTH=489
Length = 488
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 21/298 (7%)
Query: 39 GAPANVAIAVARLGGGAAFVGKLGDDEFGRMLAAILRXXXXXXXXXXFDAGARTALAFVT 98
G N+AIA ARLG +G +GD+ +G L +L + +F
Sbjct: 132 GGNCNMAIAAARLGLHCVAIGHVGDEIYGEFLLDVLHEEGIGTVALNGGTNEKDTSSFCE 191
Query: 99 ----------LRADGEREFMFYRNPSADMLLTHAELNVELIKRAAVFHYGSISLIAEPCR 148
L+ G ++ A +T V++ R + + + +
Sbjct: 192 TLICWVLVDPLQRHGFCSRADFKEEPAFSWITDLSDEVKMAIRQSKVLFCNGYDFDDFSP 251
Query: 149 SAHLRAMEIAKEAGALLSYDPNLR-EALWPSREEARTKILSIWDQADIVKVSEVELEFLT 207
S + ++ A + G + +DP R ++L + R + +D++ ++ E+E LT
Sbjct: 252 SFIMSTIDYAAKVGTAIFFDPGPRGKSLSKGTPDERRALAHFLRMSDVLLLTSEEVEALT 311
Query: 208 GIDS--VEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAF 265
GI + +++ + T K ++V +G +G + P++KV+ VDT G GD+F
Sbjct: 312 GIRNPVKAGQEILRNGKGT-KWVIVKMGPKGSILVTKSSVSVAPAFKVEVVDTVGCGDSF 370
Query: 266 VGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMESA 323
V A+ +++ L + ANA GA TA GA ++ +V+ LM+++
Sbjct: 371 VAAIALGYIRN-------MPLVNTLTIANAVGAATAMGCGAGRNVAKRHQVVDLMKAS 421
>AT5G58730.1 | chr5:23723627-23725324 REVERSE LENGTH=354
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 228 LLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQ 275
++VT G++GC+ Y +D VP + +QVD TGAGD+F+G L+ +V+
Sbjct: 215 VVVTNGEKGCRIYHKDDEMTVPPFLAKQVDPTGAGDSFLGGLIVGLVE 262
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,096,667
Number of extensions: 229737
Number of successful extensions: 626
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 617
Number of HSP's successfully gapped: 14
Length of query: 323
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 224
Effective length of database: 8,392,385
Effective search space: 1879894240
Effective search space used: 1879894240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)