BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0886600 Os01g0886600|AK070098
(496 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53350.1 | chr5:21644060-21647503 FORWARD LENGTH=580 589 e-168
AT1G33360.1 | chr1:12092111-12095789 FORWARD LENGTH=657 589 e-168
AT5G49840.1 | chr5:20255243-20259035 FORWARD LENGTH=609 548 e-156
AT5G19990.1 | chr5:6752144-6754918 FORWARD LENGTH=420 51 1e-06
AT5G20000.1 | chr5:6756915-6759550 FORWARD LENGTH=420 51 1e-06
AT1G45000.1 | chr1:17009220-17011607 FORWARD LENGTH=400 49 4e-06
AT1G09100.1 | chr1:2936675-2939258 REVERSE LENGTH=424 49 5e-06
AT5G43010.1 | chr5:17248563-17251014 REVERSE LENGTH=400 49 5e-06
>AT5G53350.1 | chr5:21644060-21647503 FORWARD LENGTH=580
Length = 579
Score = 589 bits (1519), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/428 (66%), Positives = 349/428 (81%), Gaps = 1/428 (0%)
Query: 59 TSAAPKREWWGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNATVQ 118
T + K + WGG+ LG + PTP+E+C+ L++FVIGQ +AKKVLSVAVYNHYKRIY+ + Q
Sbjct: 140 TGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQ 199
Query: 119 KGCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSL 178
K + + A D + +E++KSN+LLMGPTGSGKTLLAKTLAR VNVPF+IADAT+L
Sbjct: 200 KRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTL 259
Query: 179 TQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQ 238
TQAGYVGEDVESIL KLL A+YNV AAQQGIVYIDEVDKITKKAES N+SRDVSGEGVQ
Sbjct: 260 TQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQ 319
Query: 239 QALLKILEGTVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIG 298
QALLK+LEGT+V++PEKG+RK+ R ++IQIDTKDILFICGGAFVD+EKTISERR DSSIG
Sbjct: 320 QALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIG 379
Query: 299 FGAPIRINMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLV 358
FGAP+R NMR+ VT+ V S+L+E+VES DL YGLIPEF+GR P+LVSL+AL E+QL+
Sbjct: 380 FGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLM 439
Query: 359 QVLTEPKNSLSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILESLLLEA 418
QVLTEPKN+L +QY+KM+ +N VKLHFT+ ALR++A+KAI +NTGARGLRA+LES+L+++
Sbjct: 440 QVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDS 499
Query: 419 MYEIPDEKTGSERXXXXXXXXXXIGSIDRPGCGAKILRGDGALEQYITNTNMKNSMEAN- 477
MYEIPDE TGS+ + R G GAKILRG GAL +Y++ TN K+S +
Sbjct: 500 MYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALARYLSETNSKDSPQTTK 559
Query: 478 EGLAGELE 485
EG GE E
Sbjct: 560 EGSDGETE 567
>AT1G33360.1 | chr1:12092111-12095789 FORWARD LENGTH=657
Length = 656
Score = 589 bits (1519), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/408 (69%), Positives = 338/408 (82%), Gaps = 6/408 (1%)
Query: 68 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNATVQKGCSTNSGW 127
WGGA LG + PTP+E+C+ LD+FVIGQ +AKKVLSVAVYNHYKRIY+ +++KG +
Sbjct: 240 WGGAGLGRDFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQ--- 296
Query: 128 LDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGED 187
DD +N+E+DKSNVLLMGPTGSGKTLLAKTLAR+VNVPF+IADAT+LTQAGYVG+D
Sbjct: 297 ---PIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDD 353
Query: 188 VESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 247
VESIL KLL AE+NVQAAQQGIVYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 354 VESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEG 413
Query: 248 TVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINM 307
T+V++P KG+RK+ R + IQIDTKDILFICGGAFVDLEKTI +RRQDSSIGFGAP+R NM
Sbjct: 414 TIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANM 473
Query: 308 RSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNS 367
+S VT +TSSLLESVES DL YGLIPEF+GR PILVSL+AL EDQL++VL EPKN+
Sbjct: 474 ATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNA 533
Query: 368 LSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILESLLLEAMYEIPDEKT 427
L +QY+K+FS+N VKLHFT+ AL I++K+A+ +NTGARGLRA+LES+L EAM+EIPD+K
Sbjct: 534 LGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKK 593
Query: 428 GSERXXXXXXXXXXIGSIDRPGCGAKILRGDGALEQYITNTNMKNSME 475
G ER S GC AKILRGDGA E+Y++ K++ E
Sbjct: 594 GDERIDAVIVDEESTSSEASRGCTAKILRGDGAFERYLSENKSKDATE 641
>AT5G49840.1 | chr5:20255243-20259035 FORWARD LENGTH=609
Length = 608
Score = 548 bits (1411), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/407 (65%), Positives = 334/407 (82%), Gaps = 3/407 (0%)
Query: 76 ELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNATVQKGCSTNSGWLDAASDDQ 135
+LPTP+E+C+ LDEFVIGQ KAKKVLSVAVYNHYKRIY+A+ +KG ++ S +D D+
Sbjct: 196 KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNI 255
Query: 136 NNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQKL 195
+++E+DKSNVLL+GPTGSGKTLLAKTLARIVNVPF IADATSLTQA YVGEDVESIL KL
Sbjct: 256 DHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKL 315
Query: 196 LVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEGTVVS--IP 253
V A NV+ AQ+GIVYIDEVDK+T K+ S+N RDVSGEGVQQ+LLK+LEGTVVS IP
Sbjct: 316 YVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIP 375
Query: 254 EKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINMRSSEVT 313
EKG R++ R +SIQ+DTKDILFICGGAF+DLEKT+SER+ D+SIGFGA +R NM +S ++
Sbjct: 376 EKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLS 435
Query: 314 DPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNSLSRQYR 373
VTSSLLES++S DL YGLIPEF+GRLPILVSL+ALNEDQLVQVLTEPK++L +QY+
Sbjct: 436 SAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYK 495
Query: 374 KMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILESLLLEAMYEIPDEKT-GSERX 432
K+F +N V+L FT+GA R++A+KA+++NTGARGLR+ILES+L EAM+E+PD T GS+
Sbjct: 496 KLFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSI 555
Query: 433 XXXXXXXXXIGSIDRPGCGAKILRGDGALEQYITNTNMKNSMEANEG 479
+GS+ PGCGAKIL+GD L+Q++ K + +E
Sbjct: 556 KAVLVDEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKSKEDEA 602
>AT5G19990.1 | chr5:6752144-6754918 FORWARD LENGTH=420
Length = 419
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 145 VLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQ 204
VLL GP G+GKTLLA+ +A + FI + L Q Y+GE + + ++A E+
Sbjct: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMAREH--- 253
Query: 205 AAQQGIVYIDEVDKI-TKKAESANVSRDVSGEG---VQQALLKIL 245
I+++DE+D I + + ES SG G VQ+ +L++L
Sbjct: 254 --APSIIFMDEIDSIGSARMESG------SGNGDSEVQRTMLELL 290
>AT5G20000.1 | chr5:6756915-6759550 FORWARD LENGTH=420
Length = 419
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 145 VLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQ 204
VLL GP G+GKTLLA+ +A + FI + L Q Y+GE + + ++A E+
Sbjct: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMAREH--- 253
Query: 205 AAQQGIVYIDEVDKI-TKKAESANVSRDVSGEG---VQQALLKIL 245
I+++DE+D I + + ES SG G VQ+ +L++L
Sbjct: 254 --APSIIFMDEIDSIGSARMESG------SGNGDSEVQRTMLELL 290
>AT1G45000.1 | chr1:17009220-17011607 FORWARD LENGTH=400
Length = 399
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 145 VLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQ 204
VLL GP G+GKTLLA+ +A ++ F+ ++++ Y+GE I + A E+
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDK-YIGESARLIREMFNYAREH--- 231
Query: 205 AAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKIL 245
Q I+++DE+D I + S S D +Q+ L+++L
Sbjct: 232 --QPCIIFMDEIDAIGGRRFSEGTSAD---REIQRTLMELL 267
>AT1G09100.1 | chr1:2936675-2939258 REVERSE LENGTH=424
Length = 423
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 145 VLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQ 204
VLL GP G+GKTL+A+ A N F+ L Q ++G+ + + L+A E +
Sbjct: 207 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDGAKLVRDAFLLAKEKS-- 263
Query: 205 AAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKIL 245
I++IDE+D I K + VS D VQ+ +L++L
Sbjct: 264 ---PCIIFIDEIDAIGTKRFDSEVSGD---REVQRTMLELL 298
>AT5G43010.1 | chr5:17248563-17251014 REVERSE LENGTH=400
Length = 399
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 145 VLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQKLLVAAEYNVQ 204
VLL GP G+GKTLLA+ +A ++ F+ ++++ Y+GE I + A E+
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDK-YIGESARLIREMFNYAREH--- 231
Query: 205 AAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKIL 245
Q I+++DE+D I + S S D +Q+ L+++L
Sbjct: 232 --QPCIIFMDEIDAIGGRRFSEGTSAD---REIQRTLMELL 267
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,439,514
Number of extensions: 327885
Number of successful extensions: 1151
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1174
Number of HSP's successfully gapped: 9
Length of query: 496
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 393
Effective length of database: 8,282,721
Effective search space: 3255109353
Effective search space used: 3255109353
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)