BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0883200 Os01g0883200|AK058727
         (383 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21610.3  | chr1:7574104-7578643 FORWARD LENGTH=686            224   4e-59
AT1G77310.1  | chr1:29051671-29056179 FORWARD LENGTH=718          214   6e-56

>AT1G21610.3 | chr1:7574104-7578643 FORWARD LENGTH=686
          Length = 685

 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 223/362 (61%), Gaps = 35/362 (9%)

Query: 10  TGALYSGQVMPITSRDGSGTKPKGTRLERAIRDLQKIAAEYRPPAIDIN-EVDPNGQVAV 68
           TG+  S Q    + +DGS  K K + LE+AIR+L+K+  E RPPAI  N E D + Q AV
Sbjct: 313 TGSRQSSQA---SKKDGSNVKSKTSILEKAIRELEKVVVESRPPAITENQEADTSSQ-AV 368

Query: 69  KRRLPPEVKQKLAKVARLS-ANHGKIQEHELMDRLMGIVGHLVQRRTLRRNMKEMVESGL 127
           KRRLP +VK KLAKVAR++ A+ GK    EL++RLM IVGHL+Q R+L+RN+K M++ G 
Sbjct: 369 KRRLPRDVKLKLAKVARIAQASQGK-HSTELINRLMSIVGHLIQLRSLKRNLKIMIDMGD 427

Query: 128 SAKQEKADKFQRVKMEINEMIKSRVA-AKAKVNEHHSGSADDFQIANDEKRYLKGKSVMD 186
           SA +EK  +F+++  E+ +MIK++V+  +++  +    ++DDFQ +  EK  LK K VMD
Sbjct: 428 SATREKDTRFKQINNEVLDMIKAKVSLMESQAIKPEGATSDDFQDSV-EKPSLK-KFVMD 485

Query: 187 AALEDRICDLYDLYVEGMDEDKGPQSRKLYVELAELWPEGSMDNVGIKDAINRSKERRRS 246
           AALED++CDLYD++++G+DED+GPQ++KLYV LAELWP   MD  GIK AI R+KERR++
Sbjct: 486 AALEDKLCDLYDIFIDGLDEDQGPQTKKLYVNLAELWPNRLMDYRGIKHAIFRAKERRKA 545

Query: 247 LYNQ------QKVRNEERMXXXXXXXXXXXQDGYPVVMQ---SALIQQVAQPPITNPVAT 297
           LY         + + ++ M           Q    +V+Q   S   + +  P   N  +T
Sbjct: 546 LYGNLAKEMVDQTKMKKSMKQLVPRTDCTAQPNTELVVQRQHSGEKKLIVDP---NATST 602

Query: 298 YPVTDQ------GSKSFDRVREISASANPDDINRNTGEMKKKKRKPESDLVDTQAN-AMK 350
             VT Q        +  ++++ IS+S NP      T E +  KRK E+ + + Q   A+K
Sbjct: 603 SVVTSQTMVDRSNQQQPEKLKGISSSCNP------TEETRVVKRKNEAVMAEKQVVLALK 656

Query: 351 GP 352
            P
Sbjct: 657 KP 658



>AT1G77310.1 | chr1:29051671-29056179 FORWARD LENGTH=718
          Length = 717

 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/353 (40%), Positives = 205/353 (58%), Gaps = 24/353 (6%)

Query: 12  ALYSGQVMPITSRDGSGTKPKGTRLERAIRDLQKIAAEYRPPAIDINEVDPNGQVAVKRR 71
           A  S   + I+ + GS  +PK + LE+AIR+L+K+ AE RPPA   N+       AVKR 
Sbjct: 325 ATESKTSIQISKKSGSNGRPKYSTLEKAIRNLEKLVAESRPPAATENQDADISSQAVKRG 384

Query: 72  LPPEVKQKLAKVARLS-ANHGKIQEHELMDRLMGIVGHLVQRRTLRRNMKEMVESGLSAK 130
           LP +VK  LAKVAR++ A+ G+I   EL++RLMGIVGHL+Q R+L+RN+K M++S ++A 
Sbjct: 385 LPGDVKLHLAKVARIAYASQGEIS-GELINRLMGIVGHLIQIRSLKRNLKIMIDSIVTAN 443

Query: 131 QEKADKFQRVKMEINEMIKSRVA-AKAKVNEHHSGSADDFQIANDEKRYLKGKSVMDAAL 189
           +EK  +FQR+K EI EM+K++V   +++     +G++DDFQ      +    K VMD AL
Sbjct: 444 REKDTRFQRIKSEITEMLKTQVPLVESQETNQEAGTSDDFQDVGSLGKSPVKKFVMDVAL 503

Query: 190 EDRICDLYDLYVEGMDEDKGPQSRKLYVELAELWPEGSMDNVGIKDAINRSKERRRSLY- 248
           E+++CDLYD++VEGMDE  G Q RKLY +LA+LWP   +DN  I+ AI R KERRR+L  
Sbjct: 504 EEKLCDLYDVFVEGMDEHSGSQIRKLYSDLAQLWPNSLVDNHEIRRAICREKERRRALEG 563

Query: 249 NQQKVRNEERMXXXXXXXXXXXQDG--YPVVMQSALIQQ--VAQPPITNPVATYPVTDQG 304
           N  K  ++ ++            +G  YP       ++   V     T+ V   P  D  
Sbjct: 564 NIGKEMDQTKITKKKQTQLVPKSEGITYPDKTSGVEVKASVVLTATTTSLVDCQPAADS- 622

Query: 305 SKSFDR-------VREISASANPDDINRNTGEMKKKKRKPESDLVDTQANAMK 350
             SF+R       ++  S+ +NP        E KK +RK E  L +T   A K
Sbjct: 623 --SFERSKQQHEKLKRTSSLSNP------AAEGKKVRRKTEPALEETHLPAEK 667



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.312    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,931,707
Number of extensions: 323015
Number of successful extensions: 1022
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1019
Number of HSP's successfully gapped: 2
Length of query: 383
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 283
Effective length of database: 8,364,969
Effective search space: 2367286227
Effective search space used: 2367286227
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 112 (47.8 bits)