BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0867800 Os01g0867800|AK069062
(439 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43190.1 | chr1:16275432-16278185 REVERSE LENGTH=433 608 e-174
AT3G01150.1 | chr3:51732-54344 FORWARD LENGTH=400 151 7e-37
AT5G53180.1 | chr5:21568393-21571537 REVERSE LENGTH=430 149 2e-36
AT3G14100.1 | chr3:4673027-4675950 FORWARD LENGTH=428 52 5e-07
>AT1G43190.1 | chr1:16275432-16278185 REVERSE LENGTH=433
Length = 432
Score = 608 bits (1569), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/444 (66%), Positives = 355/444 (79%), Gaps = 17/444 (3%)
Query: 1 MAEPSKVIHIRNVGHEISESELLQVVQPFGTVAKLVMLRAKNQ----MEDLASAVNVIQY 56
MAE SKV+H+RNVGHEISE++LLQ+ QPFG + KLVMLRAKNQ M+D++SAV+ +Q+
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 57 YNTIQPSVRGRNVYLQYSSHQELTT-DQSSHGRNPDQEEPNRILLVTIHHMLYPITIEVL 115
+ +QP++RGRNVY+Q+SSHQELTT +Q+ HGR ++EPNRILLVTIHHMLYPIT++VL
Sbjct: 61 FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGR---EDEPNRILLVTIHHMLYPITVDVL 117
Query: 116 HQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYDGCCQLDIQYSNL 175
HQVFSPYGFVEK+VTFQKSAGFQ LIQYQ +Q A A AL GRNIYDGCCQLDIQ+SNL
Sbjct: 118 HQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNL 177
Query: 176 SELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDPYXXXXXXXXXXX 235
ELQV+YNNDRSRD+TNP+LP EQ+ RSS P Y D G Y
Sbjct: 178 EELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDT---------GVAYPQMANTSAIAA 228
Query: 236 XFGGTLPPGVSGINDRCTLLVSNLNTDKIDEDKLFNLFSMYGNIVRIKILKNKPDHALIQ 295
FGG LPPG++G NDRCT+LVSNLN D IDEDKLFNLFS+YGNIVRIK+L+NKPDHAL+Q
Sbjct: 229 AFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQ 288
Query: 296 MADGLQAELAVLYLKGAMLFGKKLEVNYSKYPTVTADPDARDYSTSHLNRFNSNVVKNYR 355
M DG QAELAV +LKGAMLFGK+LEVN+SK+P +T D+ DY S+LNRFN N KNYR
Sbjct: 289 MGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYR 348
Query: 356 HCCAPTKMIHISALPQDITEDTIHSLVGEHGTIANSRLFETNGKTQALVLFESVEEATEA 415
+CC+PTKMIH+S LPQD+TE+ + + V EHG + N+++FE NGK QALV FE+ EEA EA
Sbjct: 349 YCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEA 408
Query: 416 LVEKHASKLDRTNIRISFSQMQNI 439
LV KHA+ L + IRISFSQ+Q I
Sbjct: 409 LVCKHATSLGGSIIRISFSQLQTI 432
>AT3G01150.1 | chr3:51732-54344 FORWARD LENGTH=400
Length = 399
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 58/364 (15%)
Query: 4 PSKVIHIRNVGHEISESELLQVVQPFGTV--AKLVMLRAKNQ----MEDLASAVNVIQYY 57
PSKV+H+RN+ E E EL+ + + FG + K + +NQ DL A++++ YY
Sbjct: 15 PSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFADLNQAISMVSYY 74
Query: 58 -NTIQPS-VRGRNVYLQYSSHQELTTDQSSHGRNPDQEEPNRILLVTIHHM-LYPITIEV 114
++ +P+ +RG+ VY+QYS+ E+ +QS + P +LLVT + + ++I+V
Sbjct: 75 ASSSEPAQIRGKTVYIQYSNRHEIVNNQSP------GDVPGNVLLVTFEGVESHEVSIDV 128
Query: 115 LHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNI-------YDGCCQ 167
+H VFS +GFV KI TF+K+AGFQ L+Q+ ++A A AL GR+I + G C
Sbjct: 129 IHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCS 188
Query: 168 LDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDPYXXX 227
L + YS ++L + + + RSRD+TNP LP Q +++ G QP
Sbjct: 189 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQ------------TAMDGSMQPALGADGK 236
Query: 228 XXXXXXXXXFGGTLPPGVSGINDRCTLLVSNLNTDKIDEDKLFNLFSMYGNIVRIKIL-K 286
G L+ N+ + D L +FS YG + +I I K
Sbjct: 237 KVESQSNVLLG----------------LIENMQY-AVTVDVLHTVFSAYGTVQKIAIFEK 279
Query: 287 NKPDHALIQMADGLQAELAVLYLKGAMLFGK---KLEVNYSKYP--TVTADPD-ARDYST 340
N ALIQ +D A +A L+G ++ KL ++YS++ V A D +RDY+
Sbjct: 280 NGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTL 339
Query: 341 SHLN 344
L+
Sbjct: 340 PDLS 343
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 93 EEPNRILLVTIHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQA 152
E + +LL I +M Y +T++VLH VFS YG V+KI F+K+ Q LIQY +A A
Sbjct: 239 ESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMA 298
Query: 153 YGALHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDP 211
AL G IYDG C+L + YS ++L V +D+SRD+T P L + S + P
Sbjct: 299 KEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 358
Query: 212 SSLFGFQQP 220
+ G+Q P
Sbjct: 359 PA--GWQNP 365
>AT5G53180.1 | chr5:21568393-21571537 REVERSE LENGTH=430
Length = 429
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 189/363 (52%), Gaps = 66/363 (18%)
Query: 4 PSKVIHIRNVGHEISESELLQVVQPFGTVA--KLVMLRAKNQ----MEDLASAVNVIQYY 57
PSKV+H+RN+ E +E EL+++ +PFGTV K + +NQ EDL A+ +I YY
Sbjct: 16 PSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAIQMISYY 75
Query: 58 -NTIQPS-VRGRNVYLQYSSHQELTTDQSSHGRNPDQEEPNRILLVTIH-HMLYPITIEV 114
++ +P+ VRG+ VYLQYS+ QE+ ++++ + +LLVTI ++I+V
Sbjct: 76 ASSSEPAQVRGKTVYLQYSNRQEIVNNKTT------ADVVGNVLLVTIEGDDARMVSIDV 129
Query: 115 LHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYD-------GCCQ 167
LH VFS +GFV KI TF+K+AG+Q L+Q+ ++A A AL GR+I G C
Sbjct: 130 LHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCS 189
Query: 168 LDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDPYXXX 227
L I YS ++L V + + RSRD+TNP LP PS D +
Sbjct: 190 LKITYSAHTDLTVKFQSHRSRDYTNPYLPVA-------PSAIDST--------------- 227
Query: 228 XXXXXXXXXFGGTLPPGVSG--INDRCTLLVSNLNTDK--IDEDKLFNLFSMYGNIVRIK 283
G + GV G + +L++++ + + D L +F+ +G + +I
Sbjct: 228 -----------GQVAVGVDGKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIA 276
Query: 284 IL-KNKPDHALIQMADGLQAELAVLYLKGAMLFGK---KLEVNYSKYPTVTADPD---AR 336
+ KN ALIQ +D A +A L+G ++ KL + YS++ ++ + +R
Sbjct: 277 MFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSR 336
Query: 337 DYS 339
DY+
Sbjct: 337 DYT 339
>AT3G14100.1 | chr3:4673027-4675950 FORWARD LENGTH=428
Length = 427
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 32/201 (15%)
Query: 239 GTLPPGVSGINDRCTLLVSNLNTDKIDEDKLFNLFSMYGNIVRIKIL-KNKPDHALIQMA 297
G LPPG R ++ V N++T ++ E L +F+ G + K++ K+K + +
Sbjct: 47 GNLPPGFDPSTCR-SVYVGNIHT-QVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYF 104
Query: 298 DGLQAELAVLYLKGAMLFGKKLEVNYSKYPTVTADPDARDYSTSHLNRFNSNVVKNYRHC 357
D A LA+L L G LFG+ ++VN++ Y T R+ ++SH N
Sbjct: 105 DRRSAALAILSLNGRHLFGQPIKVNWA-YAT-----GQREDTSSHFN------------- 145
Query: 358 CAPTKMIHISALPQDITEDTIHSLVGEHGTIANSRLF--ETNGKTQ--ALVLFESVEEAT 413
I + L ++T+ T++ + +++R+ + G+++ V F + ++A
Sbjct: 146 ------IFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 199
Query: 414 EALVEKHASKLDRTNIRISFS 434
A+ E + L IR +++
Sbjct: 200 TAINEMNGKWLSSRQIRCNWA 220
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,036,348
Number of extensions: 368767
Number of successful extensions: 1199
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1189
Number of HSP's successfully gapped: 6
Length of query: 439
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 337
Effective length of database: 8,310,137
Effective search space: 2800516169
Effective search space used: 2800516169
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)