BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0864500 Os01g0864500|AK068115
         (238 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35980.1  | chr2:15110635-15111318 FORWARD LENGTH=228           96   1e-20
AT2G35460.1  | chr2:14905788-14906504 FORWARD LENGTH=239           80   1e-15
AT5G06320.1  | chr5:1931016-1931711 REVERSE LENGTH=232             79   2e-15
AT3G11650.1  | chr3:3676264-3676986 REVERSE LENGTH=241             75   4e-14
AT5G22870.1  | chr5:7647056-7647679 REVERSE LENGTH=208             58   4e-09

>AT2G35980.1 | chr2:15110635-15111318 FORWARD LENGTH=228
          Length = 227

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 48  CCLF----RVLAVAVIALGTAVLVLWLIYRPSVVKAYADTAALSRFDLTNGGSLLVYNLT 103
           CCL     +V+   ++ LG A L+ WLI RP  +K +   A+L+RFD T+  ++L YNL 
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLA 94

Query: 104 VGMRVRNPN-RFGINFRSVDAQASYDGDRFGYAPLQPLYVGRKSDARFDVTLSG-SAAID 161
           + + VRNPN R G+ +  ++A A Y+G RF    L P Y G K+      T  G +  I 
Sbjct: 95  LTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIF 154

Query: 162 DRDVERTYRRETAQGSYEVKVRVYARQGFKVRGFRLNN-KSKFTC-TLNLP 210
           +    RT   E   G Y ++++   R  FK+   +    K K  C  L LP
Sbjct: 155 NAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLP 205



>AT2G35460.1 | chr2:14905788-14906504 FORWARD LENGTH=239
          Length = 238

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 21/204 (10%)

Query: 46  LFCC-------LFRVLAVAVIALGTAVLVLWLIYRPSVVKAYADTAALSRFDLTNGGSLL 98
           L CC       +  +L   ++ LG   L+LW I RP+VVK     A L+RF+       L
Sbjct: 43  LLCCGGCLVNIICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNL 102

Query: 99  VYNLTVGMRVRNPN-RFGINFRSVDAQASYDGDRFGYAPLQPLYVGRKSDARFDVTLSGS 157
            YN+++   +RNPN R GI++  ++ +  Y   RF  A +   Y G K+       L+G 
Sbjct: 103 HYNISLNFSIRNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQ 162

Query: 158 A-AIDDRDVERTYRRETAQGSYEVKVRVYARQGFKVRGFRLNN---KSKFTCTLNLPAPN 213
              +      R +R +   G Y + V++  +  FK  GF LN+   + K  C L +P   
Sbjct: 163 KLVLLGAGGRRDFREDRRSGVYRIDVKLRFKLRFKF-GF-LNSWAVRPKIKCHLKVPLST 220

Query: 214 SGNGTASGTPTTVFTRKQPKCDVD 237
           S       +    F     KC VD
Sbjct: 221 S-------SSDERFQFHPTKCHVD 237



>AT5G06320.1 | chr5:1931016-1931711 REVERSE LENGTH=232
          Length = 231

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 19/200 (9%)

Query: 46  LFCCLFRVLAVAVIALGTAVLVLWLIYRPSVVKAYADTAALSRFDLTNGGSLLVYNLTVG 105
           +   +F +L    + LG A L++WLI+RP+ +K +   A L+ F L    +L  YNL + 
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLR-YNLDLN 102

Query: 106 MRVRNPN-RFGINFRSVDAQASYDGDRFGYA-PLQPLYVGRKSDARFDVTLSGSAAIDDR 163
             +RNPN R G+ +  ++ +  Y   RFG +  +   Y G K+       L G   +   
Sbjct: 103 FTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLD 162

Query: 164 DVERTYRRETAQGS-YEVKVRVYARQGFK---VRGFRLNNKSKFTCTLNLPAPNSGNGTA 219
             ER    E      Y +  ++  +  FK   ++ +R   K K  C L +P       T+
Sbjct: 163 GGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRF--KPKIKCDLKVPL------TS 214

Query: 220 SGTPTTVFTRKQP-KCDVDY 238
           + T   VF   QP KCDVD+
Sbjct: 215 NSTSGFVF---QPTKCDVDF 231



>AT3G11650.1 | chr3:3676264-3676986 REVERSE LENGTH=241
          Length = 240

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 22/201 (10%)

Query: 48  CCLFRVL-----AVAVIALGTAVLVLWLIYRPSVVKAYADTAALSRFDLTNGGSLLVYNL 102
           CC+  ++     AVAVI LG A L+LWLI+RP+ VK Y   A L+RF      +L  Y+L
Sbjct: 49  CCILSLICNILIAVAVI-LGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLH-YSL 106

Query: 103 TVGMRVRNPN-RFGINFRSVDAQASYDGDRFGYAPLQPLYVGRKSDARFDVTLSGSAAID 161
            +   +RNPN R G+ +        Y   RFG A +   Y G K+       + G   + 
Sbjct: 107 DLNFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVV 166

Query: 162 DRDVERT-YRRETAQGSYEVKVRVYARQGFK---VRGFRLNNKSKFTC-TLNLPAPNSGN 216
             D  RT  + +   G Y +  ++     FK   ++ ++L  K K  C  L +P      
Sbjct: 167 LGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKL--KPKIKCDDLKIP------ 218

Query: 217 GTASGTPTTVFTRKQPKCDVD 237
              S   T  F  +  +CD D
Sbjct: 219 -LGSSNSTGGFKFQPVQCDFD 238



>AT5G22870.1 | chr5:7647056-7647679 REVERSE LENGTH=208
          Length = 207

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 46  LFCCLFRVLAVAVIALGTAVLVLWLIYRPSVVKAYADTAALSRFDLTNGGSL-LVYNLTV 104
           L C +F V+   +       L+ WL  +P  ++   + A++  F+LTN   +   +  T+
Sbjct: 25  LICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTI 84

Query: 105 GMRVRNPN-RFGINFRSVDAQASYDGDRFGYAPLQPLYVGRKSDARFDVTLSGSAAIDDR 163
             +  NPN R  + + SV+    +      +  ++P +  R +  + D TL        +
Sbjct: 85  --QSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVSK 142

Query: 164 DVERTYRRETAQGSYEVKVRVYARQGFKVRGFRLNNKS-KFTC---TLNLPAPNSGNGTA 219
              +  R + + G    +V V AR  FKV  ++ ++++ K  C   T++L  PN    ++
Sbjct: 143 SNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNSS 202



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,655,660
Number of extensions: 178238
Number of successful extensions: 360
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 365
Number of HSP's successfully gapped: 8
Length of query: 238
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 142
Effective length of database: 8,474,633
Effective search space: 1203397886
Effective search space used: 1203397886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)