BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0857900 Os01g0857900|AK111811
(161 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27840.3 | chr1:9693332-9696257 REVERSE LENGTH=452 236 4e-63
AT1G19750.1 | chr1:6826997-6830061 FORWARD LENGTH=451 234 2e-62
AT2G16780.1 | chr2:7281615-7283583 REVERSE LENGTH=416 55 1e-08
AT5G50230.1 | chr5:20448632-20450855 REVERSE LENGTH=510 55 2e-08
AT2G32950.1 | chr2:13978000-13983282 FORWARD LENGTH=676 53 9e-08
AT5G52820.1 | chr5:21401423-21404203 FORWARD LENGTH=474 52 2e-07
AT4G35050.1 | chr4:16682752-16684751 REVERSE LENGTH=425 52 2e-07
AT5G23430.1 | chr5:7894073-7899862 REVERSE LENGTH=838 51 2e-07
AT5G67320.1 | chr5:26857268-26860974 FORWARD LENGTH=614 51 3e-07
AT1G11160.1 | chr1:3733406-3739363 FORWARD LENGTH=1022 49 8e-07
AT5G08390.1 | chr5:2701448-2706910 FORWARD LENGTH=840 49 1e-06
AT1G71840.1 | chr1:27022424-27024380 FORWARD LENGTH=408 49 1e-06
AT5G25150.1 | chr5:8677117-8682058 FORWARD LENGTH=670 49 1e-06
AT5G13480.2 | chr5:4326638-4331506 REVERSE LENGTH=654 48 2e-06
AT5G16750.1 | chr5:5504541-5509266 REVERSE LENGTH=877 48 2e-06
AT3G15610.1 | chr3:5291076-5292796 REVERSE LENGTH=342 47 4e-06
AT1G29260.1 | chr1:10224923-10225876 FORWARD LENGTH=318 47 5e-06
AT4G15900.1 | chr4:9023775-9027443 FORWARD LENGTH=487 47 6e-06
AT2G43770.1 | chr2:18134272-18135303 REVERSE LENGTH=344 47 6e-06
AT1G61210.1 | chr1:22564785-22571555 FORWARD LENGTH=1182 46 9e-06
AT1G36070.1 | chr1:13467164-13470386 REVERSE LENGTH=419 46 9e-06
AT1G10580.1 | chr1:3491560-3493665 REVERSE LENGTH=574 46 1e-05
>AT1G27840.3 | chr1:9693332-9696257 REVERSE LENGTH=452
Length = 451
Score = 236 bits (602), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 122/139 (87%)
Query: 2 AVWYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSA 61
A+WYP+DTGLF+T SFD Y+KVWDTN+ Q V+DFKMPGKVY AMS +A +H LIA G+
Sbjct: 109 AIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTE 168
Query: 62 DVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLV 121
DVQV LCDIASGAF+HTLSGHRDG+MS+EWSTSSEW+L +GGCDGAIRFWDIRRAGCF V
Sbjct: 169 DVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRV 228
Query: 122 LDQSRSQLGRRPPFLEGTS 140
LDQS++QLG RPP L+ T+
Sbjct: 229 LDQSQTQLGFRPPILKRTA 247
>AT1G19750.1 | chr1:6826997-6830061 FORWARD LENGTH=451
Length = 450
Score = 234 bits (596), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 121/136 (88%)
Query: 2 AVWYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSA 61
A+WYP+DTG+F+T SFD YVKVWDTN++QVV+DFKMPGKVY AMS +A +H LIA G+
Sbjct: 109 AIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTD 168
Query: 62 DVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLV 121
DVQV LCDIASGAF+HTLSGHRDG+MS+EWSTSSEW+L +GGCDGAIRFWDIRRAGCF V
Sbjct: 169 DVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRV 228
Query: 122 LDQSRSQLGRRPPFLE 137
LD S++QLG RPP L+
Sbjct: 229 LDNSQTQLGVRPPILK 244
>AT2G16780.1 | chr2:7281615-7283583 REVERSE LENGTH=416
Length = 415
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 4 WYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGK-VYSAAMSPIATTHMLIATGSAD 62
W+ + LF +A D + +WDT + Q+ K+ + V + +P ++AT S+D
Sbjct: 225 WHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPF--NEWVLATASSD 282
Query: 63 VQVHLCDIAS-GAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAG 117
V L D+ A H +S H + +EW + E +L S G D + WD+ R G
Sbjct: 283 STVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVG 338
>AT5G50230.1 | chr5:20448632-20450855 REVERSE LENGTH=510
Length = 509
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 2 AVWYPVDTGLFVTASFDQYVKVWDTNSTQVVMD-FKMPGKVYSAAMSPIATTHMLIATGS 60
++ + ++G T D+ VK+WDTNS ++ + G + A++ +IA S
Sbjct: 230 SIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVT--HDNKSVIAATS 287
Query: 61 ADVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGC 118
++ + + D++SG HTL+GH D + +++ S S ++S D I+ WD+ + C
Sbjct: 288 SN-NLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYC 344
>AT2G32950.1 | chr2:13978000-13983282 FORWARD LENGTH=676
Length = 675
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 8 DTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHL 67
+ + V+ S D VKVW T V++ M + +P ++ + IA GSAD +H
Sbjct: 475 EPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNY--IAVGSADHHIHY 532
Query: 68 CDIAS-GAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIR 114
D+ + H SGH+ + +++ +++E L S D +R WD++
Sbjct: 533 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDVK 578
>AT5G52820.1 | chr5:21401423-21404203 FORWARD LENGTH=474
Length = 473
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 3 VWYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFK-MPGKVYSAAMSPIATTHMLIATGSA 61
V++ D +ASFD+ V++W+ + Q V F+ G VY + S A + +L++ GS
Sbjct: 366 VYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWS--ADSRLLLS-GSK 422
Query: 62 DVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFW 111
D + + +I + L GH D + +++WS E ++ SGG D ++ W
Sbjct: 423 DSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVV-SGGKDRVLKLW 471
>AT4G35050.1 | chr4:16682752-16684751 REVERSE LENGTH=425
Length = 424
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 3 VWYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGK-VYSAAMSPIATTHMLIATGSA 61
W+ + +F +A D + +WD + Q+ K+ + + + +P ++AT S+
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPF--NEWVLATASS 282
Query: 62 DVQVHLCDIAS-GAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAG 117
D V L D+ A H LS H + +EW + E +L S G D + WDI R G
Sbjct: 283 DSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVG 339
>AT5G23430.1 | chr5:7894073-7899862 REVERSE LENGTH=838
Length = 837
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 11 LFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIA--TTHMLIATGSADVQVHLC 68
+ VT D V +W ++ +S+ + + + +L+A G+A + L
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYG----HSSGIDSVTFDASEVLVAAGAASGTIKLW 86
Query: 69 DIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGC 118
D+ TL+GHR +S+++ E+ SG D ++ WDIR+ GC
Sbjct: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKIWDIRKKGC 135
>AT5G67320.1 | chr5:26857268-26860974 FORWARD LENGTH=614
Length = 613
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 4 WYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGK-VYSAAMSPIA------TTHMLI 56
W P + L + S D K+W+ + V D + K +Y+ SP + +
Sbjct: 456 WDPTGS-LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTL 514
Query: 57 ATGSADVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRA 116
A+ S D V L D G + +GHR+ + SL +S + E+I SG D +I W I+
Sbjct: 515 ASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYI-ASGSLDKSIHIWSIKEG 573
>AT1G11160.1 | chr1:3733406-3739363 FORWARD LENGTH=1022
Length = 1021
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 21 VKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDIASGAFTHTLS 80
+K+WD +++V F G + + +A+GS+D + + D T
Sbjct: 82 IKLWDLEESKMVRAFT--GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK 139
Query: 81 GHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDI 113
GH GI ++E+S W++ SGG D ++ WD+
Sbjct: 140 GHTRGISTIEFSPDGRWVV-SGGLDNVVKVWDL 171
>AT5G08390.1 | chr5:2701448-2706910 FORWARD LENGTH=840
Length = 839
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Query: 2 AVWYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFK-MPGKVYSAAMSPIATTHMLIATGS 60
+V + GL + +K+WD +VV S P A+GS
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE---FFASGS 120
Query: 61 ADVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDI 113
D + + DI HT GH G+ L ++ WI+ SGG D ++ WD+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIV-SGGEDNVVKVWDL 172
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 11 LFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIA--TTHMLIATGSADVQVHLC 68
+ VT D V +W ++ +S+ + + + L+A G+A + L
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYG----HSSGIDSVTFDASEGLVAAGAASGTIKLW 86
Query: 69 DIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGC 118
D+ TL+GHR +S+ + E+ SG D ++ WDIR+ GC
Sbjct: 87 DLEEAKVVRTLTGHRSNCVSVNFHPFGEF-FASGSLDTNLKIWDIRKKGC 135
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 11 LFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDI 70
F + S D +K+WD + +K G + I +G D V + D+
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 71 ASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDI 113
+G H H I SL++ E++L +G D ++FWD+
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDFH-PHEFLLATGSADKTVKFWDL 214
>AT1G71840.1 | chr1:27022424-27024380 FORWARD LENGTH=408
Length = 407
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 24 WDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDIASGAFTHTLSGHR 83
+D N V G++Y+ A SP T L+ATG D + L I +G + L GH+
Sbjct: 56 FDENDDSVHTFTGHKGELYALACSPTDAT--LVATGGGDDKAFLWKIGNGDWAAELPGHK 113
Query: 84 DGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLVLD 123
D + L +S + +L SGG DG ++ +D VLD
Sbjct: 114 DSVSCLAFSYDGQ-LLASGGLDGVVQIFDASSGTLKCVLD 152
>AT5G25150.1 | chr5:8677117-8682058 FORWARD LENGTH=670
Length = 669
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 12 FVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTH-----MLIATGSADVQVH 66
F + S D+ ++W MD P ++ + +S + IATGS+D V
Sbjct: 475 FASCSHDRTARIWS-------MDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVR 527
Query: 67 LCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLVL 122
L D+ +G GHR ++SL S + + SG DG I WD+ A C L
Sbjct: 528 LWDVQTGECVRIFIGHRSMVLSLAMSPDGRY-MASGDEDGTIMMWDLSTARCITPL 582
>AT5G13480.2 | chr5:4326638-4331506 REVERSE LENGTH=654
Length = 653
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 12 FVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDIA 71
F + S D VKVWD T+ V + + G + T L+ +G D V L D
Sbjct: 228 FCSCSDDTTVKVWDF--TKCVDESSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTR 285
Query: 72 SGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIR 114
SG +L GH++ ++S++W+ + W+L + D I+ +DIR
Sbjct: 286 SGRELCSLHGHKNIVLSVKWNQNGNWLL-TASKDQIIKLYDIR 327
>AT5G16750.1 | chr5:5504541-5509266 REVERSE LENGTH=877
Length = 876
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 8 DTGLFVTASFDQYVKVWDTNSTQVVMDFK-MPGKVYSAAMSPIATTHMLIATGSADVQVH 66
D L +A + ++VWD + + + +K G V A + L+AT AD +V
Sbjct: 71 DDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACH---ASGGLLATAGADRKVL 127
Query: 67 LCDIASGAFTHTLSGHRDGIMSLEW-STSSEWILMSGGCDGAIRFWDI 113
+ D+ G TH GH+ + S+ + S++ IL+SG D +R WD+
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
>AT3G15610.1 | chr3:5291076-5292796 REVERSE LENGTH=342
Length = 341
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 10 GLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCD 69
G ++T + VK WD N +V + MP + SA++ P + + G D+ V L D
Sbjct: 199 GRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFV--AGGEDMWVRLFD 256
Query: 70 IASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFW 111
+G GH + + ++ + E SG DG IR W
Sbjct: 257 FHTGKEIGCNKGHHGPVHCVRFAPTGE-SYASGSEDGTIRIW 297
>AT1G29260.1 | chr1:10224923-10225876 FORWARD LENGTH=318
Length = 317
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 4 WYPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGK-VYSAAMSPIATTHMLIATGSAD 62
+ P F+T+S+D VK+W + V FK VY A +P + A+ S D
Sbjct: 114 YNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGD--VFASASGD 171
Query: 63 VQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIR 114
+ + D+ T + H I+S +W+ + IL + D ++ WD+R
Sbjct: 172 CTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVR 223
>AT4G15900.1 | chr4:9023775-9027443 FORWARD LENGTH=487
Length = 486
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 12 FVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDIA 71
F T S D+ +K+WD + V+ + G + ++ H + + D QV D+
Sbjct: 191 FCTGSADRTIKIWDVATG--VLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLE 248
Query: 72 SGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIR 114
+ GH G+ L + + +L++GG D R WDIR
Sbjct: 249 QNKVIRSYHGHLSGVYCLALHPTLD-VLLTGGRDSVCRVWDIR 290
>AT2G43770.1 | chr2:18134272-18135303 REVERSE LENGTH=344
Length = 343
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 LFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDI 70
L ++ S D K+WD + F ++ + + S A I TG D V + D+
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADK---IFTGGVDNDVKVWDL 209
Query: 71 ASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIR 114
G T TL GH+D I + S + L++ G D + WD+R
Sbjct: 210 RKGEATMTLEGHQDTITGMSLSPDGSY-LLTNGMDNKLCVWDMR 252
>AT1G61210.1 | chr1:22564785-22571555 FORWARD LENGTH=1182
Length = 1181
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 11 LFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIA--TTHMLIATGSADVQVHLC 68
LF+T D V +W +M +++A+ +A + +L+ G++ + L
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCG----HTSAVDSVAFDSAEVLVLAGASSGVIKLW 85
Query: 69 DIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCF 119
D+ +GHR ++E+ E+ L SG D ++ WDIR+ GC
Sbjct: 86 DVEEAKMVRAFTGHRSNCSAVEFHPFGEF-LASGSSDANLKIWDIRKKGCI 135
>AT1G36070.1 | chr1:13467164-13470386 REVERSE LENGTH=419
Length = 418
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 6 PVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQV 65
P + +TA+ D ++V+D S V +F + V + ++SP L+A +
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWSVNNTSVSPDGK---LLAVVGDSTEC 272
Query: 66 HLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRR-AGCFLVL 122
+ D SG +L GH+D + W + IL +G D A R WDIR + F VL
Sbjct: 273 LISDSHSGKVISSLRGHKDYSFASAWHPNG-LILATGNQDTACRLWDIRNPSESFAVL 329
>AT1G10580.1 | chr1:3491560-3493665 REVERSE LENGTH=574
Length = 573
Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 8 DTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHL 67
D F+TA +D+ +K WDT + QV+ F Y ++P ++ G +D ++
Sbjct: 337 DGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 396
Query: 68 CDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAIRFWD 112
DI +G T H + ++ + ++ + S D ++R W+
Sbjct: 397 WDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVWE 440
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.135 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,627,139
Number of extensions: 129429
Number of successful extensions: 1039
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 1090
Number of HSP's successfully gapped: 31
Length of query: 161
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 70
Effective length of database: 8,611,713
Effective search space: 602819910
Effective search space used: 602819910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 107 (45.8 bits)