BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0855200 Os01g0855200|AK066597
(512 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29670.1 | chr2:12682309-12684745 REVERSE LENGTH=537 341 7e-94
AT1G07280.1 | chr1:2238505-2240991 FORWARD LENGTH=553 335 4e-92
AT3G47080.1 | chr3:17338415-17340129 REVERSE LENGTH=516 237 9e-63
AT4G17940.1 | chr4:9965787-9966778 FORWARD LENGTH=275 83 3e-16
AT5G20190.1 | chr5:6814093-6815171 FORWARD LENGTH=291 82 5e-16
AT4G32340.1 | chr4:15612741-15614219 REVERSE LENGTH=239 72 6e-13
AT1G80130.1 | chr1:30141250-30142478 REVERSE LENGTH=306 65 9e-11
AT1G04530.1 | chr1:1234456-1235895 REVERSE LENGTH=311 61 2e-09
>AT2G29670.1 | chr2:12682309-12684745 REVERSE LENGTH=537
Length = 536
Score = 341 bits (874), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 205/477 (42%), Positives = 274/477 (57%), Gaps = 49/477 (10%)
Query: 55 WSVGMTRRRAGGHQMARRALSAXXXXXXXXXXXXEEFLRRIQELAV------------GL 102
W + R Q RR SA EEF ++IQEL + +
Sbjct: 82 WKSSSSSSRPIKTQSFRRVYSANLDPFSD-----EEFSKKIQELTLRFNIPHHDDDENSI 136
Query: 103 HPGAAGCGWPASVERSASSVGLPLSLRMLKRKKXXXXXXGRWDERLIDCAGESARGAVGR 162
P +S+E A+SV LPLSLR++K+K+ +W+E + AGESA ++ +
Sbjct: 137 EPPWNEMVHLSSIEMKANSVDLPLSLRIIKKKR-------QWEEG-VKQAGESACCSMNK 188
Query: 163 AFSSMVLIIRELQSFTLQMRQALFYEDLQRVLARVHAEMHASFVWLFQHIFSGTPALMVS 222
AFSSMV +IRELQSFTL MR+ LFYEDLQ +L RV EM SFVWLFQ +FS TP LMV
Sbjct: 189 AFSSMVFMIRELQSFTLHMREILFYEDLQEILLRVREEMQQSFVWLFQQVFSATPTLMVY 248
Query: 223 VMLLLANFTVYSMGDSXXXXXXXXXXXXXXXXXXMVDTQHAEQSHSHQRFDHASLKTLSI 282
VM+LLANFTVYS+G++ V +E ++ +FD + +KT +
Sbjct: 249 VMILLANFTVYSIGNNSSALAAVAPLPPTITELTTV----SETEETNVKFDSSVVKTFFV 304
Query: 283 ----GRTASVXXXXXXXXK-VRPV-AGATGDGRSDEWSNRQSGAVLPQDASQ-GTPGAGA 335
G ASV V+PV +G GDG SD + Q ++P+ SQ + G+
Sbjct: 305 SSPSGSIASVGGNNNGGGGNVKPVLSGTDGDG-SD--GSEQFRTIIPEGVSQLSSSNFGS 361
Query: 336 EEAVPVSEAMAVEETEDELVIWKRIADEATRMQASVRAEALMDPDTLGQLVAPVEAKLXX 395
E +V +DE +W + +EA RMQ S ++L D +T + V+ VEA++
Sbjct: 362 EPSV---------SGQDEHRLWNSMVEEAERMQYSNIDDSL-DQETRKRFVSHVEARVEA 411
Query: 396 XXXXXXXXXXXRYERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAE 455
Y+ +S+EP+N LLL+N+AQFLY V DHDRAE YFKRAV EP DAE
Sbjct: 412 EEDTGYFKTELMYQTELSQEPNNPLLLANYAQFLYLVSNDHDRAEEYFKRAVGVEPKDAE 471
Query: 456 AMGRYATFLWKARNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWNTGGDDTCYPLD 512
A +YATFLW+AR+DL AAEET+ EAI A+P+NS++AA YA+FLWNTGGDDTC+PLD
Sbjct: 472 AFSKYATFLWRARDDLWAAEETFLEAIDADPTNSYYAANYANFLWNTGGDDTCFPLD 528
>AT1G07280.1 | chr1:2238505-2240991 FORWARD LENGTH=553
Length = 552
Score = 335 bits (858), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 185/411 (45%), Positives = 254/411 (61%), Gaps = 39/411 (9%)
Query: 111 WP-----ASVERSASSVGLPLSLRMLKRKKXXXXXXGRWDERLIDCAGESARGAVGRAFS 165
WP +++ER A+SV LPLSLR++KRK + +E +++ GESA +V +AFS
Sbjct: 163 WPEMVQMSNIERKANSVDLPLSLRIIKRKL-------QMEEGVLNQVGESACCSVKKAFS 215
Query: 166 SMVLIIRELQSFTLQMRQALFYEDLQRVLARVHAEMHASFVWLFQHIFSGTPALMVSVML 225
SMV +IRELQSFTL MR+ L +EDLQ +L RV EM ASFVWLFQ +FS TP LMVSVM+
Sbjct: 216 SMVFMIRELQSFTLHMRELLLFEDLQGILHRVRKEMQASFVWLFQQVFSATPTLMVSVMI 275
Query: 226 LLANFTVYSMGDSXXXXXXXXXXXXXXXXXXMVDTQHAEQSHSHQRFDHASLKTLSI--- 282
LLANFTVYS+ +S + +E ++Q+FD + +KT S+
Sbjct: 276 LLANFTVYSI-ESNSALAAAVSPPTTLSFSFETTAEISETQETNQKFDSSMVKTFSVSSP 334
Query: 283 -GRTASVXXXXXXXXKVRPVAGATGDGRSDEWSNRQSGAVLPQDASQGTPGAGAEEAVPV 341
G+T+ V +G GDG SD++ R+S Q +S A+ V V
Sbjct: 335 YGKTSFVGGGGGNNIPPPVQSGTDGDG-SDQF--RKS-----QFSSSSLGATSADSDVSV 386
Query: 342 SEAMAVEETEDELVIWKRIADEATRMQASVRAEALMDPDTLGQLVAPVEAKLXXXXXXXX 401
S ++E+ +W I +E +M+ +D +T+ +V+PVEA+L
Sbjct: 387 S-------GQEEIRLWNSILEETAKMET-------LDHETMKGMVSPVEARLEAEESMDY 432
Query: 402 XXXXXRYERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYA 461
Y+ +S+EP N LLL+N+AQFLY + D+DRAE YFKRA +AEPADAEA+ +YA
Sbjct: 433 FKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEALNKYA 492
Query: 462 TFLWKARNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWNTGGDDTCYPLD 512
TFLW+ARND+ AEETY EAI+A+P+NS ++A YAHFLWNTGGD+TC+PLD
Sbjct: 493 TFLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDETCFPLD 543
>AT3G47080.1 | chr3:17338415-17340129 REVERSE LENGTH=516
Length = 515
Score = 237 bits (605), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 216/419 (51%), Gaps = 85/419 (20%)
Query: 104 PGAAGCGWP-------ASVERSASSVGLPLSLRMLKRKKXXXXXXGRWDERLIDCAGESA 156
PG A P +S+ER A+SV LPLSLR++KRK E + A +
Sbjct: 165 PGLASLEAPWAEMVNHSSIERKANSVDLPLSLRIIKRK---------LQEEALKKASATT 215
Query: 157 RGAVGRAFSSMVLIIRELQSFTLQMRQALFYEDLQRVLARVHAEMHASFVWLFQHIFSGT 216
++ RAFSSMV +I EL SF LQ R VL +V EMHAS +W+FQ +FS T
Sbjct: 216 YCSINRAFSSMVFMIEELHSFALQTRVG--------VLKQVKKEMHASLLWIFQRVFSQT 267
Query: 217 PALMVSVMLLLANFTVYSMGDSXXXXXXXXXXXXXXXXXXMVDTQHAEQSHSHQRFDHAS 276
P LMV VM+LLAN+TV+S+ + V + +Q + QR D +S
Sbjct: 268 PTLMVYVMILLANYTVHSVASNLPIAASPP-----------VVNKGPDQ--TQQRIDFSS 314
Query: 277 LKTLSIGRTASVXXXXXXXXKVRPVAGATGDGRSDEW---SNRQSGAVLPQDASQGTPGA 333
LK DG +W N + LP+ +
Sbjct: 315 LK-----------------------ESTKLDG--SKWLGSINFDKVSHLPRHRDSVSGEG 349
Query: 334 GAEEAVPVSEAMAVEETEDELVIWKRIADEATRMQASVRAEALMDPDTLGQLVAPVEAKL 393
EE V + +M VEE A +MQ S +D D +LV+P+ A++
Sbjct: 350 MREEEVSLWNSM-VEE--------------ADQMQDSS-----VDRDMRLRLVSPITARI 389
Query: 394 XXXXXXXXXXXXXRYERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPAD 453
Y+ +++EPDN LLL+N+AQFLY V +DH+RAE+ FK+A+ +E D
Sbjct: 390 ELDDYANYTRTELLYKIGLAQEPDNHLLLANYAQFLYLVTQDHERAENCFKKAIESEDVD 449
Query: 454 AEAMGRYATFLWKARNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWNTGGDDTCYPLD 512
AE +YA FLWK RNDL AAEE + EAI+A+P+NS +AA YA+FLWNTGG++TC+PL+
Sbjct: 450 AETYSKYAIFLWKVRNDLWAAEENFLEAISADPTNSFYAANYANFLWNTGGEETCFPLE 508
>AT4G17940.1 | chr4:9965787-9966778 FORWARD LENGTH=275
Length = 274
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
Y + P+NSLLL N+ +FLY V++D + AE Y+ RA+ P D EA+ Y +W+
Sbjct: 154 YREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWET 213
Query: 468 RNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLW 500
+ D A+ + +A+ A P++ +YA F+W
Sbjct: 214 KRDEKRAQGYFDQAVNASPNDCMVLGSYARFMW 246
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
Y RA+ E P + LS + + ++ +RD RA+ YF +AV A P D +G YA F+W+A
Sbjct: 189 YGRAILENPGDGEALSMYGRLIWETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEA 248
>AT5G20190.1 | chr5:6814093-6815171 FORWARD LENGTH=291
Length = 290
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
Y + + P N + LSN+A+FL V++D+ +AE Y RA+ P D + YA +WK
Sbjct: 160 YRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKI 219
Query: 468 RNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWN 501
D + AE + +A+AA P + + A+YA FLW+
Sbjct: 220 HKDSSRAENYFNQAVAAAPEDCYVQASYARFLWD 253
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 410 RAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
RA+ P++ +L+ +A+ ++ + +D RAE+YF +AV A P D YA FLW A
Sbjct: 197 RAILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAVAAAPEDCYVQASYARFLWDA 254
>AT4G32340.1 | chr4:15612741-15614219 REVERSE LENGTH=239
Length = 238
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPA-DAEAMGRYATFLWK 466
YE + P ++LLLSN+A+FL V+ D +AE Y +RA+ +E D E + Y +WK
Sbjct: 114 YEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWK 173
Query: 467 ARNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLWN 501
D A+ Y +A+ + P + + A+YA FLW+
Sbjct: 174 NHGDGVRAQSYYDQAVQSSPDDCNVLASYARFLWD 208
>AT1G80130.1 | chr1:30141250-30142478 REVERSE LENGTH=306
Length = 305
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
Y + P NSLL N+A+FL V+ D +AE Y +RA+ D + YA +
Sbjct: 169 YREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHN 228
Query: 468 RNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLW 500
D A Y++A+ P + + A+YA FLW
Sbjct: 229 HQDRQRAHSYYKQAVKMSPEDCYVQASYARFLW 261
>AT1G04530.1 | chr1:1234456-1235895 REVERSE LENGTH=311
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQRDHDRAEHYFKRAVRAEPADAEAMGRYATFLWKA 467
Y+ + E P + LLL N+A+FL + D AE Y+ + EP+D A+ Y + K
Sbjct: 125 YKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMKL 183
Query: 468 RNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLW 500
D A A ++ A+ A P +S AAYA FLW
Sbjct: 184 HQDEAKAMSYFERAVQASPDDSIVLAAYASFLW 216
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 408 YERAVSEEPDNSLLLSNFAQFLYTVQ-------------------RDHDRAEHYFK-RAV 447
+ERAV PD+S++L+ +A FL+ + +D A+ K ++
Sbjct: 194 FERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESSGQGKDEFEADAAGKGKSS 253
Query: 448 RAEPADAEAMGRYATFLWKARNDLAAAEETYQEAIAAEPSNSHHAAAYAHFLW 500
++ D E + RYA W ND A +++A+ A P++S YA FLW
Sbjct: 254 LSKTEDGETLCRYAKAFWSINNDHEKALFYFEKAVEASPNDSIILGEYARFLW 306
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,211,690
Number of extensions: 265262
Number of successful extensions: 723
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 695
Number of HSP's successfully gapped: 12
Length of query: 512
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 409
Effective length of database: 8,282,721
Effective search space: 3387632889
Effective search space used: 3387632889
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)