BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0852200 Os01g0852200|AK102621
(353 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46980.3 | chr3:17307294-17309899 REVERSE LENGTH=535 480 e-136
AT2G38060.1 | chr2:15922727-15925623 REVERSE LENGTH=513 375 e-104
AT4G00370.1 | chr4:163153-166111 REVERSE LENGTH=542 245 3e-65
AT2G29650.1 | chr2:12673685-12676003 REVERSE LENGTH=513 238 4e-63
AT5G20380.1 | chr5:6887936-6892358 REVERSE LENGTH=518 164 4e-41
AT5G44370.1 | chr5:17875147-17876445 REVERSE LENGTH=433 147 8e-36
>AT3G46980.3 | chr3:17307294-17309899 REVERSE LENGTH=535
Length = 534
Score = 480 bits (1236), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/353 (65%), Positives = 283/353 (80%)
Query: 1 MAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSA 60
MA+GVALWSLATFL+PWAA SLW L+ R ++G+AEGVALP MNNMV RWFP TERS A
Sbjct: 181 MAWGVALWSLATFLTPWAADSSLWALLAARAMVGVAEGVALPCMNNMVARWFPPTERSRA 240
Query: 61 VGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQI 120
VGIAMAGFQLGN +GL+LSPI+MS+ GI+GPFVIFGL GFLW+LVW+SA S P + QI
Sbjct: 241 VGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFVIFGLSGFLWLLVWLSATSSAPDRHPQI 300
Query: 121 SAHELDYITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWM 180
+ EL+YI + +++ ++ +PPF +LLSK PTWA+I AN+MHSWG+FVILSWM
Sbjct: 301 TKSELEYIKQKKQISTMENKRISTSGIPPFGRLLSKMPTWAVIVANSMHSWGFFVILSWM 360
Query: 181 PVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFV 240
P+YF ++YHVNL++AAWFSA+PW MMA GY+AG SD LI+ GTSITLTRKIMQ+IGF+
Sbjct: 361 PIYFNSVYHVNLKQAAWFSAVPWSMMAFTGYIAGFWSDLLIRRGTSITLTRKIMQSIGFI 420
Query: 241 GPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGT 300
GPG+AL+GL AK P++ASAWL++AVGLKSF H GFL+NLQEIAP+Y+GVLHGM TAGT
Sbjct: 421 GPGIALIGLTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAPEYSGVLHGMCLTAGT 480
Query: 301 FAAILGTVGAGFFVDRMGSFRGXXXXXXXXXXXXXXXWDIFATGERVDFDGTG 353
AAI+GTVGAGFFV+ +GSF+G ++I+ATGERVDFD T
Sbjct: 481 LAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGERVDFDTTA 533
>AT2G38060.1 | chr2:15922727-15925623 REVERSE LENGTH=513
Length = 512
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 243/347 (70%), Gaps = 3/347 (0%)
Query: 1 MAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSA 60
+A+GVALWSLAT L+PWAAA S L R G+AEGVA+PSM ++ RWFP ER+SA
Sbjct: 168 LAWGVALWSLATLLTPWAAAHSTLALLCVRAFFGLAEGVAMPSMTTLLSRWFPMDERASA 227
Query: 61 VGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQI 120
VGI+MAGF +GN +GLLL+P+++S GI GPF++F G LWV W S ++ P ++ I
Sbjct: 228 VGISMAGFHMGNVVGLLLTPLMLSSIGISGPFILFASLGLLWVSTWSSGVTNNPQDSPFI 287
Query: 121 SAHELDYITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWM 180
+ EL I G+ + Q + P LLSK PTWA+I AN ++WGYFV+LSWM
Sbjct: 288 TRSELRLIQAGKPV---QPSTISPKPNPSLRLLLSKLPTWAIIFANVTNNWGYFVLLSWM 344
Query: 181 PVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFV 240
PVYF+T+++VNL++AAWFSALPW MA+ GY AG SD LI+ G S+T RKIMQ+IGF+
Sbjct: 345 PVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSVRKIMQSIGFM 404
Query: 241 GPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGT 300
GPG++LL LN AKSP A+ ++TIA+ L SF +GFL+N+Q+IAPQYAG LHG+SN AGT
Sbjct: 405 GPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHGISNCAGT 464
Query: 301 FAAILGTVGAGFFVDRMGSFRGXXXXXXXXXXXXXXXWDIFATGERV 347
AAI+ T+G G+FV +GSF+ W +FATGERV
Sbjct: 465 LAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFATTVFWLLFATGERV 511
>AT4G00370.1 | chr4:163153-166111 REVERSE LENGTH=542
Length = 541
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 195/347 (56%), Gaps = 8/347 (2%)
Query: 1 MAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSA 60
+ +GV WS AT ++P AA L L R +G+ EGVA+P+MNNM+ +W P +ERS +
Sbjct: 201 LGFGVVWWSFATIMTPIAARLGLPFLLVVRAFMGIGEGVAMPAMNNMLSKWIPVSERSRS 260
Query: 61 VGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQI 120
+ + +G LG+ GL SP+++++ G F FG G +W L+W+ +P ++ +
Sbjct: 261 LALVYSGMYLGSVTGLAFSPMLITKFGWPSVFYSFGSLGSIWFLLWLKFAYSSPKDDPDL 320
Query: 121 SAHELDYITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWM 180
S E I G K + + V P+ +LSK P WALI ++ H+WG F++L+WM
Sbjct: 321 SEEEKKVILGGSKPREPVT-------VIPWKLILSKPPVWALIISHFCHNWGTFILLTWM 373
Query: 181 PVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFV 240
P Y+ + NL E+ LPW+ MAV + G ++D L+ G SIT RKIMQ+IGF+
Sbjct: 374 PTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIGFL 433
Query: 241 GPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGT 300
GP L L+ K+P +A + + G +F SG N Q+I P+YAGVL G+SNTAG
Sbjct: 434 GPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGV 493
Query: 301 FAAILGTVGAGFFVDRMGSFRGXXXXXXXXXXXXXXXWDIFATGERV 347
A + GT G+ + R GS+ W++FATGE++
Sbjct: 494 LAGVFGTAATGYILQR-GSWDDVFKVAVALYLIGTLVWNLFATGEKI 539
>AT2G29650.1 | chr2:12673685-12676003 REVERSE LENGTH=513
Length = 512
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 190/347 (54%), Gaps = 8/347 (2%)
Query: 1 MAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSA 60
+ +GV WS+AT L+P AA L L R +G+ EGVA+P+MNN++ +W P ERS +
Sbjct: 172 LGFGVIWWSIATILTPVAAKLGLPYLLVVRAFMGVGEGVAMPAMNNILSKWVPVQERSRS 231
Query: 61 VGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQI 120
+ + +G LG+ GL SP ++ + G F FG G +W+ +W++ +P E+ +
Sbjct: 232 LALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWLTLWLTKAESSPLEDPTL 291
Query: 121 SAHELDYITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWM 180
E +KL+ + K P+ +LSK P WALIS + H+WG F++L+WM
Sbjct: 292 LPEE-------RKLIADNCASKEPVKSIPWRLILSKPPVWALISCHFCHNWGTFILLTWM 344
Query: 181 PVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFV 240
P Y+ + NL E+ S PW+ MA+ G ++D L+ G S+T RKIMQTIGF+
Sbjct: 345 PTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIGFL 404
Query: 241 GPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGT 300
GP L L SP +A + + G +F SG N Q+IAP+Y+GVL G+SNTAG
Sbjct: 405 GPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGV 464
Query: 301 FAAILGTVGAGFFVDRMGSFRGXXXXXXXXXXXXXXXWDIFATGERV 347
A +LGT G + GS+ W++F+TGE++
Sbjct: 465 LAGVLGTAATGHILQH-GSWDDVFTISVGLYLVGTVIWNLFSTGEKI 510
>AT5G20380.1 | chr5:6887936-6892358 REVERSE LENGTH=518
Length = 517
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 9/321 (2%)
Query: 1 MAYGVALWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSA 60
+ GV WS AT L P A L S R+L+G+ EGV+ + +++ R P ERS A
Sbjct: 168 LEIGVFTWSFATALVPLLAGFMPGLIFS-RILVGIGEGVSPSAATDLIARTIPVKERSRA 226
Query: 61 VGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQI 120
VG G LG+ +GLLL+P I+ F +FGL G + W E
Sbjct: 227 VGFVFGGLSLGSVMGLLLAPPIIETFNWESVFYLFGLLG----VGWFVGFQFLNEEEVSY 282
Query: 121 SAHELDYITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWM 180
+E+ + + K + G L+++P + WA+I + SWG++ LSW+
Sbjct: 283 KGNEISTSHKSENATKEELGSS-LKEIP-WKSFFQSPAVWAMIYTHFCGSWGHYTCLSWL 340
Query: 181 PVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFV 240
P YF +NL EAAW S LP + V+ +A +D LI NG T RKI QTI FV
Sbjct: 341 PTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQFADYLITNGVDTTTVRKICQTIAFV 400
Query: 241 GPGVA--LLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTA 298
P + L ++ P LT + L SF SG Q+I+P+YA +L G++NT
Sbjct: 401 APAICMTLSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV 460
Query: 299 GTFAAILGTVGAGFFVDRMGS 319
G I+G GF +D S
Sbjct: 461 GAVPGIVGVALTGFLLDSTHS 481
>AT5G44370.1 | chr5:17875147-17876445 REVERSE LENGTH=433
Length = 432
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 9/302 (2%)
Query: 7 LWSLATFLSPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMA 66
LWS FL P R + L + R+L+G+A+G PS++ ++ +W P ERS V I +
Sbjct: 85 LWSSTCFLVPLDPNR-VGLLVVARLLVGVAQGFIFPSIHTVLAQWVPPHERSRLVSITTS 143
Query: 67 GFQLGNTIGLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQISAH-EL 125
G LG +G+ L P ++ G F+ L G +W L+WI + P S H +
Sbjct: 144 GMYLGAALGMWLLPALVELRGPESVFLAEALAGVIWSLLWIRYATDPPR-----SEHPKA 198
Query: 126 DYITRGQKLVKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWMPVYFK 185
G L+ T ++ + P+ K++ P WA++ N + +V+++W+P YF+
Sbjct: 199 AAAGFGGALLPTNVNHHKVTHI-PWKKIMLSLPVWAIVVNNFTFHYALYVLMNWLPTYFE 257
Query: 186 TIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGT-SITLTRKIMQTIGFVGPGV 244
++L+ +P++ M V V G ++D LI S+T TRK + T+GF+
Sbjct: 258 LGLQISLQGMDSSKMVPYLNMFVFSIVGGFIADYLITKRILSVTRTRKFLNTVGFLIASA 317
Query: 245 ALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAI 304
AL+ L ++ ++A+G + G +GF VN +IAP+YAG++ G+SNTAGT A I
Sbjct: 318 ALMVLPMFRTENGVILCSSVALGFLALGRAGFAVNHMDIAPRYAGIVMGVSNTAGTLAGI 377
Query: 305 LG 306
+G
Sbjct: 378 IG 379
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,085,753
Number of extensions: 273191
Number of successful extensions: 856
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 844
Number of HSP's successfully gapped: 6
Length of query: 353
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 253
Effective length of database: 8,364,969
Effective search space: 2116337157
Effective search space used: 2116337157
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)