BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0847200 Os01g0847200|AK122126
(361 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39770.1 | chr2:16589401-16590741 FORWARD LENGTH=362 631 0.0
AT3G55590.1 | chr3:20617479-20618881 FORWARD LENGTH=365 591 e-169
AT4G30570.1 | chr4:14930706-14931951 REVERSE LENGTH=332 484 e-137
AT1G74910.1 | chr1:28135770-28138456 REVERSE LENGTH=416 195 4e-50
AT2G04650.1 | chr2:1621986-1624486 REVERSE LENGTH=407 192 2e-49
AT4G18300.1 | chr4:10118852-10120981 FORWARD LENGTH=710 51 9e-07
AT2G34970.1 | chr2:14746340-14748532 FORWARD LENGTH=731 50 2e-06
>AT2G39770.1 | chr2:16589401-16590741 FORWARD LENGTH=362
Length = 361
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/361 (84%), Positives = 328/361 (90%)
Query: 1 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEVGVTEVVLAINYRPEVM 60
MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALK VGV EVVLAINY+PEVM
Sbjct: 1 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAVGVDEVVLAINYQPEVM 60
Query: 61 LNFLKDFEDKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEYPFAE 120
LNFLKDFE KL I ITCSQETEPLGTAGPLALARDKL+DGSGEPFFVLNSDVISEYP E
Sbjct: 61 LNFLKDFETKLEIKITCSQETEPLGTAGPLALARDKLLDGSGEPFFVLNSDVISEYPLKE 120
Query: 121 LIKFHKSHGGEATIMVTKVDEPSKYXXXXXXXXXXXXXKFVEKPKIFVGNKINAGIYLLN 180
+++FHKSHGGEA+IMVTKVDEPSKY KFVEKPK++VGNKINAGIYLLN
Sbjct: 121 MLEFHKSHGGEASIMVTKVDEPSKYGVVVMEESTGRVEKFVEKPKLYVGNKINAGIYLLN 180
Query: 181 PSVLDRIELKPTSIEKEVFPRIASDAKLFALVLPGFWMDVGQPRDYITGLRLYLDSLRKR 240
PSVLD+IEL+PTSIEKE FP+IA+ L+A+VLPGFWMD+GQPRDYITGLRLYLDSLRK+
Sbjct: 181 PSVLDKIELRPTSIEKETFPKIAAAQGLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKK 240
Query: 241 STNRLATGAHIVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVHIKK 300
S +L +G HIVGNVLV E+A IGEGCLIGPDVAIGPGC+VE GVRLSRCTVMRGV IKK
Sbjct: 241 SPAKLTSGPHIVGNVLVDETATIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKK 300
Query: 301 HACISNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYTNGGVVLPHKEIKSSILKPEIV 360
HACIS+SIIGWHSTVGQWARIENMTILGEDVHV DE+Y+NGGVVLPHKEIKS+ILKPEIV
Sbjct: 301 HACISSSIIGWHSTVGQWARIENMTILGEDVHVSDEIYSNGGVVLPHKEIKSNILKPEIV 360
Query: 361 M 361
M
Sbjct: 361 M 361
>AT3G55590.1 | chr3:20617479-20618881 FORWARD LENGTH=365
Length = 364
Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/364 (78%), Positives = 320/364 (87%), Gaps = 3/364 (0%)
Query: 1 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEVGVTEVVLAINYRPE-- 58
MKALILVGGFGTRLRPLTLS PKPLVDFANKPMILHQIEALK +GV EVVLAINY PE
Sbjct: 1 MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQL 60
Query: 59 -VMLNFLKDFEDKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEYP 117
VM F D E LGI ITCSQETEPLGTAGPLALARDKLVDGSG+PFFVLNSDVIS+YP
Sbjct: 61 LVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYP 120
Query: 118 FAELIKFHKSHGGEATIMVTKVDEPSKYXXXXXXXXXXXXXKFVEKPKIFVGNKINAGIY 177
E+I FH +HGGEA+IMVTKVDEPSKY +FVEKPK+FVGNKINAGIY
Sbjct: 121 LEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIY 180
Query: 178 LLNPSVLDRIELKPTSIEKEVFPRIASDAKLFALVLPGFWMDVGQPRDYITGLRLYLDSL 237
LLNPSVLDRIEL+PTSIEKE+FP+IA KL+A++LPGFWMD+GQPRDYITGLRLYLDSL
Sbjct: 181 LLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSL 240
Query: 238 RKRSTNRLATGAHIVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVH 297
RK+S ++LATG HI+GNVLV E+A+IGEGCLIGP+VAIGPGCVVE GVRLS CTVMRGVH
Sbjct: 241 RKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVH 300
Query: 298 IKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYTNGGVVLPHKEIKSSILKP 357
+K++ACIS+SIIGWHSTVGQWAR+ENM+ILG++V+V DE+Y NGGVVL +KEIKS ILKP
Sbjct: 301 VKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKP 360
Query: 358 EIVM 361
+IVM
Sbjct: 361 DIVM 364
>AT4G30570.1 | chr4:14930706-14931951 REVERSE LENGTH=332
Length = 331
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/329 (71%), Positives = 276/329 (83%), Gaps = 1/329 (0%)
Query: 21 FPKPLVDFANKPMILHQIEALKEVGVTEVVLAINYR-PEVMLNFLKDFEDKLGITITCSQ 79
PKPLVDF NKPMILHQIEALK GVTEVVLAIN++ PEVMLNF+K++E KL I IT SQ
Sbjct: 1 MPKPLVDFGNKPMILHQIEALKGAGVTEVVLAINHQQPEVMLNFVKEYEKKLEIKITFSQ 60
Query: 80 ETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEYPFAELIKFHKSHGGEATIMVTKV 139
ETEPLGTAGPLALARDKLVD SG+PFFVLNSDVI EYP E+I+FHK++ EA+IMVT+V
Sbjct: 61 ETEPLGTAGPLALARDKLVDESGQPFFVLNSDVICEYPLLEMIEFHKTNRAEASIMVTEV 120
Query: 140 DEPSKYXXXXXXXXXXXXXKFVEKPKIFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVF 199
D+PSKY FVEKPK FVGNKINAGIYLL+PSVLDRIEL+ TSIEKE+F
Sbjct: 121 DDPSKYGVVVTEEGTARVESFVEKPKHFVGNKINAGIYLLSPSVLDRIELRRTSIEKEIF 180
Query: 200 PRIASDAKLFALVLPGFWMDVGQPRDYITGLRLYLDSLRKRSTNRLATGAHIVGNVLVHE 259
P+IAS+ KL+A+VLPGFWMD+GQP+DYITG R+YL+SLR+++ LATG +I+GNVLVHE
Sbjct: 181 PKIASEKKLYAMVLPGFWMDIGQPKDYITGQRMYLNSLREKTPQELATGDNIIGNVLVHE 240
Query: 260 SAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVHIKKHACISNSIIGWHSTVGQWA 319
SA IGEGCLIGPDV IGPGCV++ GVRL CTVMRGV IK+HACISNSI+GW STVG+WA
Sbjct: 241 SAVIGEGCLIGPDVVIGPGCVIDSGVRLFGCTVMRGVWIKEHACISNSIVGWDSTVGRWA 300
Query: 320 RIENMTILGEDVHVGDEVYTNGGVVLPHK 348
R+ N+T+LG+DV+V D N GVV+ +
Sbjct: 301 RVFNITVLGKDVNVADAEVYNSGVVIEEQ 329
>AT1G74910.1 | chr1:28135770-28138456 REVERSE LENGTH=416
Length = 415
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 205/406 (50%), Gaps = 48/406 (11%)
Query: 3 ALILVGG--FGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEV-GVTEVVLAINYRPEV 59
A+I+VGG GTR RPL+L+ PKPL A +PM+ H I A K + + ++ L Y
Sbjct: 11 AVIMVGGPTKGTRFRPLSLNIPKPLFPIAGQPMVHHPISACKRIPNLAQIYLVGFYEERE 70
Query: 60 MLNFLKDFEDKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEYPFA 119
++ ++L + + +E +P G+AG L R+ +++ S F+LN DV +P
Sbjct: 71 FALYVSAISNELKVPVRYLREDKPHGSAGGLYHFRNLIMEDSPSHIFLLNCDVCCSFPLP 130
Query: 120 ELIKFHKSHGGEATIMVTKV--DEPSKYXXXXXXXXXXXXXKFVEKPKIFVGNKINAGIY 177
++++ H+ +GG T++V KV + S++ + EKP+ FV ++IN G+Y
Sbjct: 131 KMLEAHRGYGGIGTLLVIKVSPESASQFGELVADPVTNELLHYTEKPETFVSDRINCGVY 190
Query: 178 LLNPSVL-----------DRIELKPTS-----------------IEKEVFPRIASDAKLF 209
+ P + DR LK S +++++ +A +L+
Sbjct: 191 VFTPEIFNAIGDVSTQRKDRATLKRVSSFEALQPATRIPTDFVRLDQDILSPLAGKKRLY 250
Query: 210 ALVLPGFWMDVGQPRDYITGLRLYLDSLRKRSTNRLATG-----AHIVGNVLVHESAKIG 264
FW + P + LYL R S LA+G A ++G+V +H SAK+
Sbjct: 251 TYETMDFWEQIKSPGMSLRCSGLYLSQFRLTSPQLLASGDGTRSAIVIGDVYIHPSAKVH 310
Query: 265 EGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVHIKKHACISNSIIGWHSTVGQWARIE-- 322
IGP+V+I V GVRL C ++ V I ++A ++N+I+GW S++G+W+R++
Sbjct: 311 PTAKIGPNVSISANARVGPGVRLMSCIILDDVEIMENAVVTNAIVGWKSSIGRWSRVQAE 370
Query: 323 -------NMTILGEDVHVGDEVYTNGGVVLPHKEIKSSILKPEIVM 361
+TILG+ V V DEV +VLP+K + S+ + EI++
Sbjct: 371 GVYNSKLGVTILGDSVAVEDEVVVTSSIVLPNKTLNVSV-QDEIIL 415
>AT2G04650.1 | chr2:1621986-1624486 REVERSE LENGTH=407
Length = 406
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 199/393 (50%), Gaps = 41/393 (10%)
Query: 3 ALILVGG--FGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEVG-VTEVVLAINYRPEV 59
A+I+VGG GTR RPL+ + PKPL+ A +PMI H I A K++ + ++ L Y
Sbjct: 8 AVIMVGGPTKGTRFRPLSFNTPKPLIPLAGQPMIHHPISACKKISNLAQIFLIGFYEERE 67
Query: 60 MLNFLKDFEDKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEYPFA 119
++ ++L I + +E +P G+AG L RD++++ F+LN DV +P
Sbjct: 68 FALYVSSISNELKIPVRYLKEDKPHGSAGALYYFRDRIMEEKPSHVFLLNCDVCCSFPLQ 127
Query: 120 ELIKFHKSHGGEATIMVTKV--DEPSKYXXXXXXXXXXXXXKFVEKPKIFVGNKINAGIY 177
++ H+ +GG T++V KV + S++ + EKP+ FV + IN G+Y
Sbjct: 128 GILDAHRRYGGIGTMLVIKVSAEAASQFGELIADPDTKELLHYTEKPETFVSDLINCGVY 187
Query: 178 LLNPSVLDRIE-----LKPTS----------------IEKEVFPRIASDAKLFALVLPGF 216
+ + + IE ++ TS +++++ +A +L+ F
Sbjct: 188 VFTSDIFNAIEEVYSQIRDTSSNYQSATRSVPADFVRLDQDILSPLAGKKQLYTYENKDF 247
Query: 217 WMDVGQPRDYITGLRLYLDSLRKRSTNRLATG------AHIVGNVLVHESAKIGEGCLIG 270
W + P + LYL R+ S + LA+G I+G+V +H S K+ IG
Sbjct: 248 WEQIKTPGKSLKCSALYLSQFRETSPHILASGDGTNRKPTIIGDVYIHPSVKLHPTAKIG 307
Query: 271 PDVAIGPGCVVEDGVRLSRCTVMRGVHIKKHACISNSIIGWHSTVGQWARIE-------- 322
P+V+I V GVRL C ++ V IK++A + NSIIGW S++G+W+R++
Sbjct: 308 PNVSISANVRVGPGVRLISCIILDDVEIKENAVVINSIIGWKSSIGRWSRVQASGDYNDR 367
Query: 323 -NMTILGEDVHVGDEVYTNGGVVLPHKEIKSSI 354
+TILGE V V DEV G +VL +K + S+
Sbjct: 368 LGITILGEAVTVEDEVAVIGSIVLQNKTLNVSV 400
>AT4G18300.1 | chr4:10118852-10120981 FORWARD LENGTH=710
Length = 709
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 1 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEVGVTEVVLAINYRPEVM 60
++A++L F T+ R +TL PK L+ N PMI + + L+ G+ EV + +
Sbjct: 24 LQAILLADSFTTQFRSITLERPKVLLPIVNIPMIDYTLAWLESAGIEEVFVFCCAHSSQI 83
Query: 61 LNFLKDFE------DKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVIS 114
+++LK E L + S + +G A + F +++ D +S
Sbjct: 84 IDYLKKSEWYTRPNPNLLVRTIVSHNSTSVGDALRYIYEQQTETSQIQGDFVLVSGDTVS 143
Query: 115 EYPFAELIKFHK 126
P A+LI+ H+
Sbjct: 144 NMPLADLIQQHR 155
>AT2G34970.1 | chr2:14746340-14748532 FORWARD LENGTH=731
Length = 730
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 1 MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEVGVTEVVLAINYRPEVM 60
++A++L F T+ RP+TL PK L+ N PMI + + L+ G+ EV + +
Sbjct: 25 LQAILLADSFATKFRPVTLERPKVLLPIVNVPMIDYTLAWLESAGIEEVFVFCCAHSMQV 84
Query: 61 LNFLKDFE----DKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEY 116
+ +L+ E L + S ++ G A + F +++ D +S
Sbjct: 85 IEYLEKSEWYSHPNLLVRTIESHKSISAGDALRYMYEQQTETSQIQGDFVLVSGDTVSNM 144
Query: 117 PFAELIKFHK 126
P A+LI+ H+
Sbjct: 145 PLADLIQEHR 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.140 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,741,773
Number of extensions: 321946
Number of successful extensions: 634
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 620
Number of HSP's successfully gapped: 7
Length of query: 361
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 261
Effective length of database: 8,364,969
Effective search space: 2183256909
Effective search space used: 2183256909
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)