BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0843300 Os01g0843300|Os01g0843300
(597 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27540.1 | chr5:9722816-9727112 FORWARD LENGTH=649 629 e-180
AT3G63150.1 | chr3:23329200-23332692 REVERSE LENGTH=644 555 e-158
AT3G05310.1 | chr3:1510160-1513301 FORWARD LENGTH=649 446 e-125
AT4G35020.1 | chr4:16673176-16674540 FORWARD LENGTH=199 55 1e-07
AT3G51300.1 | chr3:19043197-19044215 FORWARD LENGTH=198 55 1e-07
AT4G28950.1 | chr4:14278289-14279705 FORWARD LENGTH=210 54 3e-07
AT1G20090.1 | chr1:6967223-6968603 FORWARD LENGTH=196 53 5e-07
AT2G17800.1 | chr2:7740313-7741942 FORWARD LENGTH=198 53 6e-07
AT1G75840.1 | chr1:28475964-28477377 FORWARD LENGTH=197 52 8e-07
AT4G35950.1 | chr4:17024051-17025514 REVERSE LENGTH=198 51 2e-06
>AT5G27540.1 | chr5:9722816-9727112 FORWARD LENGTH=649
Length = 648
Score = 629 bits (1622), Expect = e-180, Method: Compositional matrix adjust.
Identities = 321/605 (53%), Positives = 399/605 (65%), Gaps = 49/605 (8%)
Query: 14 QSLRVVVIGDPGTGKSSLVVSAATEXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXX 68
+S+R+VV+GD GTGKSSL+V+AAT+
Sbjct: 16 KSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPDYKLPIEFFPDGIPVTIVDTSSRP 75
Query: 69 EQRSKLIAECQSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGE 128
E R + E + AD VVLTYACD+P TLERLS +W PELRRL+++ P+IV GCKLD R +
Sbjct: 76 EDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDD 135
Query: 129 E-QGTLDAVMAPIMVAFREIETCIECSALRQILVYEVFYYAQKAVLYPTAPLFDQEAQML 187
Q +L+ VM+PIM FREIETCIECSAL+Q+ EVFYYAQK VL+PT PLFDQ++Q L
Sbjct: 136 NNQVSLEQVMSPIMQQFREIETCIECSALKQLQAQEVFYYAQKTVLHPTGPLFDQDSQAL 195
Query: 188 KLRCMRALKRIFILCDHDRDGAFSDVELNDFQVICFNAPLQPNEIIGVKRTIQEKLTEGV 247
K RC+RALKRIFILCDHDRDGA S+ ELNDFQV CF+APLQP+EI GVKR +QEKL EGV
Sbjct: 196 KPRCVRALKRIFILCDHDRDGALSEAELNDFQVKCFHAPLQPSEIEGVKRVVQEKLPEGV 255
Query: 248 NENXXXXXXXXXXXXXIIGNGKLETTWTVLRKFGYDNELKLRDDLIPA--IKRAP----- 300
NE I G+LETTWTVLRKFGY+N+++L ++L+P+ KRAP
Sbjct: 256 NERGLTVTGFLFLHALFIEKGRLETTWTVLRKFGYNNDIRLAEELLPSAIFKRAPDQSFE 315
Query: 301 ------------------DQDGALQPAEINDLFSTAPENPWSSHLYENCAENNVLGGLSF 342
DQD L+P EI DLFSTAPE+PW YE+ AE LGGLSF
Sbjct: 316 LTNAAIDFLKGMYMLFDDDQDNNLRPQEIEDLFSTAPESPWKEAPYEDAAEKTALGGLSF 375
Query: 343 EGFISKWTLMTLIHPSNSFANLIYVGYPGDFDSAFXXXXXXXXXXXXXXXXXNVFQCYVF 402
+ F+S W+LMTL+ P+ S NLIY+G+PGD +A VFQC+VF
Sbjct: 376 DAFLSMWSLMTLLEPARSVENLIYIGFPGDPSTAIRVTRRRRLDRKKQQCERKVFQCFVF 435
Query: 403 GPRHAGKTALLQSFLKRYHS------------------IGTRKTLVMREISEGDVGPLLS 444
GP +AGK+ALL FL R ++ G +KTL+MREI E V L S
Sbjct: 436 GPNNAGKSALLNCFLGRSYTDNQESTTDERYAVNMVDESGAKKTLIMREIPEDGVQGLFS 495
Query: 445 DKESLAPCDVAVIVYDSGDEVSWQRARELLVQVATRGKNTGYEVPCLIVAAKDDLDQSPL 504
KESLA CD+AV VYDS DE SW+RA +LLV+VA G+ TGYEVPCL+V+AKDDLD SP+
Sbjct: 496 SKESLAACDIAVFVYDSSDESSWKRATQLLVEVANYGEATGYEVPCLMVSAKDDLDSSPI 555
Query: 505 ALQDSTRVSHDMGIETPIPISVRLRDLNNIFCRIVHAAQQPHLSIPETEAGKTHRQYRQL 564
++Q+STR++ DMGIE P+ IS +L D NN+F +I+ AAQ PHLSIPETEAGK+ + Y +L
Sbjct: 556 SIQESTRMTQDMGIEPPVSISSKLGDFNNLFRKILTAAQHPHLSIPETEAGKSRKHYNRL 615
Query: 565 LNRSL 569
+NRSL
Sbjct: 616 INRSL 620
>AT3G63150.1 | chr3:23329200-23332692 REVERSE LENGTH=644
Length = 643
Score = 555 bits (1429), Expect = e-158, Method: Compositional matrix adjust.
Identities = 292/607 (48%), Positives = 378/607 (62%), Gaps = 49/607 (8%)
Query: 12 GKQSLRVVVIGDPGTGKSSLVVSAATEXXXXXXXXXXXXXXXXXXXX-----XXXXXXXX 66
G+ SLRV V GD GTGKSSL+ + A+E
Sbjct: 11 GRTSLRVAVAGDKGTGKSSLISAVASETFPDNVPRVLPPITLPADAFPDYIPITIVDTPS 70
Query: 67 XXEQRSKLIAECQSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLR 126
+ R KLI E + ADVV+LTYACDQP+TL+RLSS+W PELRRL+++APVIVVGCKLDLR
Sbjct: 71 SIDNRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLR 130
Query: 127 GEEQ-GTLDAVMAPIMVAFREIETCIECSALRQILVYEVFYYAQKAVLYPTAPLFDQEAQ 185
E L+ +M+PIM +REIETCIECSAL I V +VFY+A KAVL+PT PLFDQE Q
Sbjct: 131 DERSPARLEDIMSPIMKEYREIETCIECSALTLIQVPDVFYFASKAVLHPTFPLFDQEKQ 190
Query: 186 MLKLRCMRALKRIFILCDHDRDGAFSDVELNDFQVICFNAPLQPNEIIGVKRTIQEKLTE 245
LK R RA++RIF LCDHD DGA +D ELNDFQV CF APL P E++GVK+ +QE+ +
Sbjct: 191 CLKPRLRRAVQRIFNLCDHDLDGALNDAELNDFQVNCFGAPLDPVELMGVKKVVQERQPD 250
Query: 246 GVNENXXXXXXXXXXXXXIIGNGKLETTWTVLRKFGYDNELKLRDDLIPA-IKRAPDQ-- 302
GV + I G+ ET W +LRK GY++ L+L +L+P K++PDQ
Sbjct: 251 GVTDLGLTLPGFLFLFSLFIERGRPETAWAILRKCGYNDSLELHAELLPVPAKQSPDQSI 310
Query: 303 ---------------------DGALQPAEINDLFSTAPENPWSSHLYENCAENNVLGGLS 341
DGALQPAE++DLF TAP++PW Y+ AE G L+
Sbjct: 311 ELTNEAMDFLSGIFQLYDLDNDGALQPAELDDLFQTAPDSPWLEDPYKEAAEKTPGGSLT 370
Query: 342 FEGFISKWTLMTLIHPSNSFANLIYVGYPGDFDSAFXXXXXXXXXXXXXXXXXNVFQCYV 401
GF+S+W LMTL+ P S ANL Y+GY D S F NVFQC+V
Sbjct: 371 INGFLSEWALMTLLDPRKSLANLTYIGYGHDPASTFSVTRKRSVDRKKQRTERNVFQCFV 430
Query: 402 FGPRHAGKTALLQSFLKRYHSI-------------------GTRKTLVMREISEGDVGPL 442
FGP+ +GK+ALL SFL R S G++KTL++REI E V
Sbjct: 431 FGPKKSGKSALLDSFLGRKFSNSYKATMGERYAANVIDQPGGSKKTLILREIPEDRVKKF 490
Query: 443 LSDKESLAPCDVAVIVYDSGDEVSWQRARELLVQVATRGKNTGYEVPCLIVAAKDDLDQS 502
L++KESLA CDVAV+VYDS D SW++ARE+L++VA RG+ GY PCL+VAAKDDLD
Sbjct: 491 LTNKESLAACDVAVVVYDSSDVYSWRKAREILMEVARRGEERGYGTPCLLVAAKDDLDPY 550
Query: 503 PLALQDSTRVSHDMGIETPIPISVRLRDLNNIFCRIVHAAQQPHLSIPETEAGKTHRQYR 562
P+++Q+S RV ++GI+ P+ +S++L + N++F RIV A+ PH+SIPETE+G+ R R
Sbjct: 551 PMSVQESDRVCMELGIDIPVSLSMKLGEPNSLFSRIVSTAENPHMSIPETESGRRSRNIR 610
Query: 563 QLLNRSL 569
QL+N SL
Sbjct: 611 QLVNSSL 617
>AT3G05310.1 | chr3:1510160-1513301 FORWARD LENGTH=649
Length = 648
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/613 (40%), Positives = 353/613 (57%), Gaps = 60/613 (9%)
Query: 14 QSLRVVVIGDPGTGKSSLVVSAATEXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXX 68
+ +R+VV+G+ G+GKSSL+++AA
Sbjct: 13 KPIRIVVVGEKGSGKSSLIMAAARNTFHPNIPSLLPYTNLPSEFFPDRIPATVIDTSSRP 72
Query: 69 EQRSKLIAECQSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLR-G 127
E + K++ E + AD +VLT+A D+P TL+RLS +W P R+L++ P+IV G ++D +
Sbjct: 73 EDKGKVVKEVRQADAIVLTFAFDRPETLDRLSKYWLPLFRQLEVRVPIIVAGYEVDNKEA 132
Query: 128 EEQGTLDAVMAPIMVAFREIETCIECSALRQILVYEVFYYAQKAVLYPTAPLFDQEAQML 187
+++ + + +M +RE+ET I+ SA R +V YYAQKAV+ P P+FDQE +L
Sbjct: 133 YNHFSIEQITSALMKQYREVETSIQWSAQRLDQAKDVLYYAQKAVIDPVGPVFDQENNVL 192
Query: 188 KLRCMRALKRIFILCDHDRDGAFSDVELNDFQVICFNAPLQPNEIIGVKRTIQEKLTEGV 247
K RC+ ALKRIF+L DH+ DG SD ELN+ Q CF+ PL P EI +K +Q +GV
Sbjct: 193 KPRCIAALKRIFLLSDHNMDGILSDEELNELQKKCFDTPLVPCEIKQMKNVMQVTFPQGV 252
Query: 248 NENXXXXXXXXXXXXXIIGNGKLETTWTVLRKFGYDNELKLRDDLIP--AIKRAPDQ--- 302
NE +I +++T WT+LRKFGY N+L+L DDL+P + KR DQ
Sbjct: 253 NERGLTLDGFLFLNTRLIEEARIQTLWTMLRKFGYSNDLRLGDDLVPYSSFKRQADQSVE 312
Query: 303 --------------------DGALQPAEINDLFSTAPENPWSSHLYENCAENNVLGGLSF 342
D L+P E+ LF TAPE+PW+ LY++ E N+ GGLS
Sbjct: 313 LTNVAIEFLREVYEFFDSNGDNNLEPHEMGYLFETAPESPWTKPLYKDVTEENMDGGLSL 372
Query: 343 EGFISKWTLMTLIHPSNSFANLIYVGYPGDF-DSAFXXXXXXXXXXXXXXXXXNVFQCYV 401
E F+S W+LMTLI P S L+Y+ +P D SA V QC+V
Sbjct: 373 EAFLSLWSLMTLIDPPRSLEYLMYIRFPSDDPSSAVRVTRKRVLDRKEKKSERKVVQCFV 432
Query: 402 FGPRHAGKTALLQSFLKR---------------YHSIG----------TRKTLVMREISE 436
FGP++AGK+ALL F+ R ++++ T KTLV++E+
Sbjct: 433 FGPKNAGKSALLNQFIGRSYDDDSNNNNGSTDEHYAVNMVKEPGVISDTDKTLVLKEVRI 492
Query: 437 GDVGPLLSDKESLAPCDVAVIVYDSGDEVSWQRARELLVQVATRGKNTGYEVPCLIVAAK 496
D G +LS KE+LA CDVA+ +YDS DE SW RA ++L +VAT K++GY PCL+VAAK
Sbjct: 493 KDDGFMLS-KEALAACDVAIFIYDSSDEYSWNRAVDMLAEVATIAKDSGYVFPCLMVAAK 551
Query: 497 DDLDQSPLALQDSTRVSHDMGIETPIPISVRLRDLNNIFCRIVHAAQQPHLSIPETEAGK 556
DLD P+A+Q+STRV+ D+GI+ PIPIS +L D++N+F +I+ AA+ PHL+IPE E+ K
Sbjct: 552 TDLDPFPVAIQESTRVTQDIGIDAPIPISSKLGDVSNLFRKILTAAENPHLNIPEIESKK 611
Query: 557 THRQYRQLLNRSL 569
++ +L NRSL
Sbjct: 612 --KRSCKLNNRSL 622
>AT4G35020.1 | chr4:16673176-16674540 FORWARD LENGTH=199
Length = 198
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ ADV +L ++ A+ E +S W PELR P+I+VG KLDLR ++Q + A
Sbjct: 76 RGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGA 135
Query: 139 -PIMVAFRE-------IETCIECSALRQILVYEVFYYAQKAVLYP 175
PI A E IECSA Q V VF A K VL P
Sbjct: 136 VPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180
>AT3G51300.1 | chr3:19043197-19044215 FORWARD LENGTH=198
Length = 197
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ ADV +L ++ A+ E +S W PEL+ P+++VG KLDLR ++Q +D A
Sbjct: 76 RGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGA 135
Query: 139 -PIMVAFRE-------IETCIECSALRQILVYEVFYYAQKAVL 173
PI A E T IECS+ Q V VF A + VL
Sbjct: 136 VPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVL 178
>AT4G28950.1 | chr4:14278289-14279705 FORWARD LENGTH=210
Length = 209
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ AD+ VL ++ A+ E + W PELRR P+++VG KLDLR ++ D
Sbjct: 76 RGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKGYLADHTNV 135
Query: 139 PIMVAFREIE------TCIECSALRQILVYEVFYYAQKAVLYP 175
E+ IECS+ Q V VF A K VL P
Sbjct: 136 ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 178
>AT1G20090.1 | chr1:6967223-6968603 FORWARD LENGTH=196
Length = 195
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ ADV +L ++ A+ E ++ W PELR P+I+VG KLDLR ++Q +D A
Sbjct: 75 RGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGA 134
Query: 139 -PIMVAFRE-------IETCIECSALRQILVYEVFYYAQKAVL 173
PI E IECS+ Q V VF A K VL
Sbjct: 135 VPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVL 177
>AT2G17800.1 | chr2:7740313-7741942 FORWARD LENGTH=198
Length = 197
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ ADV +L ++ A+ E +S W PEL+ P+++VG KLDLR ++Q +D A
Sbjct: 76 RGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGA 135
Query: 139 -PIMVAFRE-------IETCIECSALRQILVYEVFYYAQKAVL 173
PI A E IECS+ Q V VF A + VL
Sbjct: 136 VPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT1G75840.1 | chr1:28475964-28477377 FORWARD LENGTH=197
Length = 196
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ ADV +L ++ A+ E ++ W PELR P+I+VG KLDLR ++Q +D A
Sbjct: 76 RGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGA 135
Query: 139 -PIMVAFRE-------IETCIECSALRQILVYEVFYYAQKAVL 173
PI E IECS+ Q V VF A K VL
Sbjct: 136 VPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178
>AT4G35950.1 | chr4:17024051-17025514 REVERSE LENGTH=198
Length = 197
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 79 QSADVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGEEQGTLDAVMA 138
+ ADV +L ++ A+ E +S W PEL+ P+++VG KLDLR ++Q +D A
Sbjct: 76 RGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGA 135
Query: 139 -PIMVAFRE-------IETCIECSALRQILVYEVFYYAQKAVL 173
PI E IECS+ Q V VF A + VL
Sbjct: 136 VPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 178
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,756,823
Number of extensions: 426530
Number of successful extensions: 1181
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 1165
Number of HSP's successfully gapped: 10
Length of query: 597
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 493
Effective length of database: 8,255,305
Effective search space: 4069865365
Effective search space used: 4069865365
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)