BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0841100 Os01g0841100|AK119375
(427 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421 315 4e-86
AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421 134 1e-31
AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423 118 6e-27
AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425 117 8e-27
AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404 100 2e-21
AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247 91 1e-18
AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255 88 8e-18
AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250 87 2e-17
AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248 86 3e-17
AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248 85 6e-17
AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248 79 5e-15
AT3G12660.1 | chr3:4019060-4019827 FORWARD LENGTH=256 65 8e-11
AT2G24450.1 | chr2:10393019-10393861 REVERSE LENGTH=281 50 2e-06
>AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421
Length = 420
Score = 315 bits (806), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/327 (53%), Positives = 223/327 (68%), Gaps = 17/327 (5%)
Query: 43 FPSFADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXX-XXXXDVLRYHV 101
FP+ + F+ LL SS +A EL+ R+SLTLLAVPN+ D+LR+HV
Sbjct: 38 FPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPSALADLLRFHV 97
Query: 102 LLEYLSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVG-GNSTVVVRSPAPFPGSS 160
LL++LS SDL R+P SG VTTL++ +GR G+VN+T + +V + SPA +
Sbjct: 98 LLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGSPA---TKN 154
Query: 161 ATVLGAVTAVPYNLSVLAVGGLIVPSGLDVAASD-----------SRPAGGVNITHVLAD 209
TVL + P N++VL V LIVP+G+D+ AS+ S P G+N+T +L +
Sbjct: 155 VTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGINLTQILIN 214
Query: 210 ARGFNVAASMLEASGVADEFTADERGAGITVFVPTDDAFADLPATDRLQSLPADRKATVL 269
FNVA S+L ASGV EF DERGAGITVFVPTD AF+DLP+ LQSLPA++KA VL
Sbjct: 215 GHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVL 274
Query: 270 RFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNITRVNGS-VAIDTGIVQASITR 328
+FHVLHSYY LGSLESI NPVQPTLATE AG +TLNI+RVNGS V I++G+V A +T+
Sbjct: 275 KFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQ 334
Query: 329 TVFDQNPVAVFAVSKVLLPKEMFGRGG 355
T FDQNPV+VF VSKVLLPKE+F + G
Sbjct: 335 TAFDQNPVSVFGVSKVLLPKELFPKSG 361
>AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421
Length = 420
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 157/311 (50%), Gaps = 13/311 (4%)
Query: 44 PSFADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXXXXXXDVLRYHVLL 103
P ++ F L + +A E+ +R+++T+L + N + +L VLL
Sbjct: 36 PDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALAGKHPLSVIKSALSLL---VLL 92
Query: 104 EYLSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATV 163
+Y P L ++ L TTL+QTTG AP +LG VN+T V S A ++
Sbjct: 93 DYYDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGFGSAASGSKLDSSY 152
Query: 164 LGAVTAVPYNLSVLAVGGLIVPSGLDVAASDSRPAGGVNITHVLADARGFNVAASMLEAS 223
+V +PYN+S+L + I+ G+ A + S A NIT +L A G A++L +S
Sbjct: 153 TKSVKQIPYNISILEIDAPIIAPGVLTAPAPS--ASLSNITGLLEKA-GCKTFANLLVSS 209
Query: 224 GVADEF-TADERGAGITVFVPTDDAFADLPATDRLQSLPADRKATVLRFHVLHSYYPLGS 282
GV + +A E+G +TVF P+D+AF D L L ++L +H L Y P GS
Sbjct: 210 GVLKTYESAVEKG--LTVFAPSDEAFKAEGVPD-LTKLTQAEVVSLLEYHALAEYKPKGS 266
Query: 283 LESIVNPVQPTLATERFEAGQFTLNITRVNGSVAIDTGIVQASITRTVFDQNPVAVFAVS 342
L++ N + TLAT AG+F L + V + TG+ + + TV D PV +F V
Sbjct: 267 LKTNKNNIS-TLATNG--AGKFDLTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVD 323
Query: 343 KVLLPKEMFGR 353
VLLP E+FG+
Sbjct: 324 NVLLPAELFGK 334
>AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423
Length = 422
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 157/310 (50%), Gaps = 10/310 (3%)
Query: 44 PSFADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXXXXXXDVLRYHVLL 103
P ++ F L + +A E+ +R+++T+L + N + + L VLL
Sbjct: 36 PEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAM---SSLAGKHPLSVVKNALSLLVLL 92
Query: 104 EYLSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATV 163
+Y P L +L L TTL+QTTG A +LG VN+T V S AP ++
Sbjct: 93 DYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLGFVNVTDLKGGKVGFGSAAPGSKLDSSY 152
Query: 164 LGAVTAVPYNLSVLAVGGLIVPSGLDVAASDSRPAGGVNITHVLADARGFNVAASMLEAS 223
+V +PYN+SVL + I+ G+ A + S AG NIT +L A G A++L +S
Sbjct: 153 TKSVKQIPYNISVLEINAPIIAPGILTAPAPSS-AGVSNITGLLEKA-GCKTFANLLVSS 210
Query: 224 GVADEFTADERGAGITVFVPTDDAFADLPATDRLQSLPADRKATVLRFHVLHSYYPLGSL 283
GV F + G+TVF P+D+AF D L +L ++L +H L Y P GSL
Sbjct: 211 GVIKTFESTVE-KGLTVFAPSDEAFKARGVPD-LTNLTQAEVVSLLEYHALAEYKPKGSL 268
Query: 284 ESIVNPVQPTLATERFEAGQFTLNITRVNGSVAIDTGIVQASITRTVFDQNPVAVFAVSK 343
++ + + TLAT AG++ L + V + TG+ + + TV D+ PV +F V
Sbjct: 269 KTNKDAIS-TLATNG--AGKYDLTTSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDN 325
Query: 344 VLLPKEMFGR 353
VLLP E+FG+
Sbjct: 326 VLLPAELFGK 335
>AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425
Length = 424
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 21/312 (6%)
Query: 44 PSFADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXXXXXXDVLRYHVLL 103
PSF+ F+ L + +A E+ R ++T+ AV +N ++L HVLL
Sbjct: 35 PSFSSFSHFLTQTHLADEINRRRTITVCAV--DNAAMSALTSKGYTLSTLKNILSLHVLL 92
Query: 104 EYLSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLT--VGGNSTVVVRSPAPFPGS-S 160
+Y L ++ L TLFQ TG AP G VN+T GG P G S
Sbjct: 93 DYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVGF-----GPDGGDLS 147
Query: 161 ATVLGAVTAVPYNLSVLAVGGLIVPSGLDVAASDSRPAGGVNITHVLADARGFNVAASML 220
+ + ++ VPYN+S++ + ++PS + AA+ + +N+T +++ A G V A L
Sbjct: 148 SFFVKSIEEVPYNISIIQIS-RVLPS--ETAAAPTPAPAEMNLTGIMS-AHGCKVFAETL 203
Query: 221 EASGVADEFTADERGAGITVFVPTDDAFAD-LPATDRLQSLPADRKATVLRFHVLHSYYP 279
+ A + + G+TVF P DDA LP + ++L A +K L F + +YY
Sbjct: 204 LTNPGASKTYQESLEGGMTVFCPGDDAMKGFLP---KYKNLTAPKKEAFLDFLAVPTYYS 260
Query: 280 LGSLESIVNPVQPTLATERFEAGQFTLNITRVNGSVAIDTGIVQASITRTVFDQNPVAVF 339
+ L+S P+ TLAT+ A +F L + V + T I I T+ D+ P+A++
Sbjct: 261 MAMLKSNNGPMN-TLATDG--ANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIY 317
Query: 340 AVSKVLLPKEMF 351
A KVLLPKE+F
Sbjct: 318 ATDKVLLPKELF 329
>AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404
Length = 403
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 151/310 (48%), Gaps = 16/310 (5%)
Query: 44 PSFADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXXXXXXDVLRYHVLL 103
P F+ F L ++ +A E+ R ++T+LAV N+ + ++L HVL+
Sbjct: 37 PDFSTFNHYLSATHLADEINRRQTITVLAVDNSAMS--SILSNGYSLYQIRNILSLHVLV 94
Query: 104 EYLSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATV 163
+Y L ++ ++FQ+TG A G +N+T V +A
Sbjct: 95 DYFGTKKLHQITDGSTSTASMFQSTGSATGTSGYINITDIKGGKVAFGVQDDDSKLTAHY 154
Query: 164 LGAVTAVPYNLSVLAVGGLIVPSGLDVAASDSRPAGGVNITHVLADARGFNVAASMLEAS 223
+ +V PYN+SVL + ++ + A + P+ + +T +L + +G + +L+++
Sbjct: 155 VKSVFEKPYNISVLHISQVLTSP--EAEAPTASPSDLI-LTTIL-EKQGCKAFSDILKST 210
Query: 224 GVADEFTADERGAGITVFVPTDDAFAD-LPATDRLQSL-PADRKATVLRFHVLHSYYPLG 281
G AD+ D G+TVF P+D A +P + +SL PA++ A VL +H + Y L
Sbjct: 211 G-ADKTFQDTVDGGLTVFCPSDSAVGKFMP---KFKSLSPANKTALVL-YHGMPVYQSLQ 265
Query: 282 SLESIVNPVQPTLATERFEAGQFTLNITRVNGSVAIDTGIVQASITRTVFDQNPVAVFAV 341
L S N TLATE +F + V ++T +V A + T+ DQ P+ V+ +
Sbjct: 266 MLRS-GNGAVNTLATEG--NNKFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKI 322
Query: 342 SKVLLPKEMF 351
KVLLP+E++
Sbjct: 323 DKVLLPREIY 332
>AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247
Length = 246
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 197 PAGGVNITHVLADARGFNVAASMLEASGVADEFTADERGA---GITVFVPTDDAFADLPA 253
P+G NIT +L A F + +L+++ +D+ + G+TVF PTD+AF L
Sbjct: 31 PSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSL-K 89
Query: 254 TDRLQSLPADRKATVLRFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNITRVNG 313
+ L SL +K +++FHVL + + +++ NP++ T A + + G+F LNIT
Sbjct: 90 SGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLR-TQAGDG-QNGKFPLNITSSGN 147
Query: 314 SVAIDTGIVQASITRTVFDQNPVAVFAVSKVLLPKEMFG 352
V I TG+V A++ +V+ +AV+ V +VLLP MFG
Sbjct: 148 QVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 186
>AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255
Length = 254
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 200 GVNITHVLADARGFNVAASMLEASGVADEFT--ADERGAGITVFVPTDDAFADLPATDRL 257
VN+T +L+ A F+ L ++GV + F A+ GIT+FVP DDAF L
Sbjct: 44 NVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAF-KAQKNPPL 102
Query: 258 QSLPADRKATVLRFHVLHSYYPLGSLESIVN--PVQPTLATERFEAGQFTLNITRVNGSV 315
+L D+ ++ FH L YY L +++ PV F GQ++L T V+G+V
Sbjct: 103 SNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPV------STFAGGQYSLKFTDVSGTV 156
Query: 316 AIDTGIVQASITRTVFDQNPVAVFAVSKVLLPKEMFG 352
ID+ + ++ +VF +PVAV+ V++VLLP+ +FG
Sbjct: 157 RIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193
>AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250
Length = 249
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 89/152 (58%), Gaps = 5/152 (3%)
Query: 202 NITHVLADARGFNVAASMLEASGVADEFTA--DERGAGITVFVPTDDAFADLPATDRLQS 259
N+T +L A F V +L+++GVA++ + GIT+F P+D +F L A L S
Sbjct: 39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKA-GTLNS 97
Query: 260 LPADRKATVLRFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNITRVNGSVAIDT 319
L +++ +++FHV+ SY + ++I NP++ T A + + G F LN+T +V I +
Sbjct: 98 LTDEQQVELIQFHVIPSYVSSSNFQTISNPLR-TQAGDSAD-GHFPLNVTTSGNTVNITS 155
Query: 320 GIVQASITRTVFDQNPVAVFAVSKVLLPKEMF 351
G+ +++ V+ +AV+ V KVLLP+++F
Sbjct: 156 GVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248
Length = 247
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 201 VNITHVLADARGFNVAASMLEASGVADE--FTADERGAGITVFVPTDDAFADL-PATDRL 257
+N+T +L F +L + V + + G+TVF PTD+AF +L P T L
Sbjct: 38 INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGT--L 95
Query: 258 QSLPADRKATVLRFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNITRVNGSVAI 317
L D + ++ +HV YY + L S+ NPV+ T A+ R + G + LN T + +
Sbjct: 96 NQLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVR-TQASGR-DNGVYGLNFTGQTNQINV 153
Query: 318 DTGIVQASITRTVFDQNPVAVFAVSKVLLPKEMFGR 353
TG V+ I+ ++ Q P+AV+ V VLLP EMFG
Sbjct: 154 STGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGE 189
>AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248
Length = 247
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 201 VNITHVLADARGFNVAASMLEASGVADEFTA--DERGAGITVFVPTDDAFADL-PATDRL 257
+NIT +L F +L + + ++ + G+TV PTD+AF +L P T L
Sbjct: 35 INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGT--L 92
Query: 258 QSLPADRKATVLRFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNITRVNGSVAI 317
L D + ++ +HV +Y L L S+ NPV+ T A+ R G + LN T V +
Sbjct: 93 NKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVR-TQASGRDVGGVYGLNFTGQGNQVNV 151
Query: 318 DTGIVQASITRTVFDQNPVAVFAVSKVLLPKEMFGR 353
TG+V+ ++ ++ + P+AV+ V VLLP+EMFG
Sbjct: 152 STGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGE 187
>AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248
Length = 247
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 201 VNITHVLADARGFNVAASMLEASGVADEFTA--DERGAGITVFVPTDDAFADL-PATDRL 257
+N+T +L F +L + V + + + G+T+F PTD+AF L P T L
Sbjct: 37 INLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGT--L 94
Query: 258 QSLPADRKATVLRFHVLHSYYPLGSLESIVNPVQPTLATERFEAGQFTLNIT--RVNGSV 315
SL ++ ++ +H++ YY L L NPV+ T AT + + G F LN T + V
Sbjct: 95 NSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVR-TQATGQ-DGGVFGLNFTGQAQSNQV 152
Query: 316 AIDTGIVQASITRTVFDQNPVAVFAVSKVLLPKEMFG 352
+ TG+V+ I + Q P+AV+ V VLLP+E+FG
Sbjct: 153 NVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG 189
>AT3G12660.1 | chr3:4019060-4019827 FORWARD LENGTH=256
Length = 255
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 46 FADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXXXXXXDVLRYHVLLEY 105
F++F +LL + +A + R ++T+L V N L +L H++L+Y
Sbjct: 36 FSNFNQLLSETQLASTINKRQTITVLVVSNGAL----SSLSGQPTSVIKKILSLHIVLDY 91
Query: 106 LSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATVLG 165
L L L+TTLFQ++G A G +N TV N V S P A +
Sbjct: 92 YDQKKLKNLSKKTVLLTTLFQSSGLARGQQGFLNATVMKNGDVAFGSAVPGSSLDAQLQD 151
Query: 166 AVTAVPYNLSVLAVGGLIV 184
V A+P+N+SVL + I+
Sbjct: 152 TVAALPFNISVLHISSAIM 170
>AT2G24450.1 | chr2:10393019-10393861 REVERSE LENGTH=281
Length = 280
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 43 FPSFADFARLLESSPVAGELAARSSLTLLAVPNNNLPRXXXXXXXXXXXXXXDVLRYHVL 102
+P F+ LL + + + R ++T+LA+ N+ + ++L HV+
Sbjct: 34 YPEFSTMTELLAKTELTPIINKRQTITVLALNNDAI----GSISGRPEEEVKNILMNHVV 89
Query: 103 LEYLSPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSAT 162
L+Y L L L+TTL+Q+TG G +N T N + S +A
Sbjct: 90 LDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLNCT-KSNGKIYFGSGVKGAPQTAE 148
Query: 163 VLGAVTAVPYNLSVLAVGGLIVPSGL 188
+ V PYNLSV+ + IV GL
Sbjct: 149 YITTVFRNPYNLSVVQISMPIVAPGL 174
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,795,051
Number of extensions: 257251
Number of successful extensions: 702
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 667
Number of HSP's successfully gapped: 13
Length of query: 427
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 326
Effective length of database: 8,337,553
Effective search space: 2718042278
Effective search space used: 2718042278
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)