BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0838100 Os01g0838100|AK065393
(474 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19130.1 | chr4:10466618-10469092 REVERSE LENGTH=785 62 9e-10
AT5G08020.1 | chr5:2572107-2574879 FORWARD LENGTH=605 60 3e-09
AT1G52950.1 | chr1:19725483-19728007 FORWARD LENGTH=567 57 2e-08
AT5G61000.1 | chr5:24549682-24552641 REVERSE LENGTH=630 56 4e-08
AT2G05642.1 | chr2:2098253-2100867 REVERSE LENGTH=533 55 6e-08
AT1G14800.1 | chr1:5099572-5102558 FORWARD LENGTH=385 54 3e-07
AT2G06510.1 | chr2:2585215-2587601 FORWARD LENGTH=641 49 4e-06
>AT4G19130.1 | chr4:10466618-10469092 REVERSE LENGTH=785
Length = 784
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 23/283 (8%)
Query: 48 ISPASRGWKIRAKI---ARMWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFR 104
+SP S W I+A++ A + Y+ + + DL +D G + AD+F
Sbjct: 234 LSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDL--LDADGGEIRVTCFNAVADQFY 291
Query: 105 PLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQF 164
+ +Y S+ + P++ + N Y I L + ++Q E A P H F+
Sbjct: 292 DQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTI 351
Query: 165 SYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGE 224
+ DVIG++ +S + + T+ TPKR + L+D++ V++ +WG
Sbjct: 352 G--DIESMENNCIVDVIGIVSSISPTVTITRKNGTA-TPKRSLQLKDMSGRSVEVTMWG- 407
Query: 225 HAPDFDADAVHSVGQDNAVVGIFVDTLMKAYN----NEETLSGGSACKWYLNEDIPE--- 277
DF +A Q G+F +KA N +T+S + + +++ D E
Sbjct: 408 ---DF-CNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEK 463
Query: 278 INQFFDSLGDSAPKIQWISTGAESFGSSQRPARLEHKSVADLK 320
+ +F+ G S P IS E GS + R + D K
Sbjct: 464 LKNWFEREGKSVP---CISLSREFSGSGKVDVRKTISQIKDEK 503
>AT5G08020.1 | chr5:2572107-2574879 FORWARD LENGTH=605
Length = 604
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 45 LCDISPASRGWKIRAKIAR---MWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEAD 101
L ++P W I+ ++ M Y + +V+L DE+G + A + A
Sbjct: 160 LVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELT--DEEGTQIQATMFNAAAR 217
Query: 102 KFRPLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNL 161
KF + KVY S+ + + +K N Y + L + VE+ + P FN
Sbjct: 218 KFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNF 277
Query: 162 VQFSYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVL 221
V L V Q+ DVIG++ VS +R + PKR I L D V + L
Sbjct: 278 VPIDELGTYVN-QKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSL 336
Query: 222 WGEHA 226
W + A
Sbjct: 337 WNDLA 341
>AT1G52950.1 | chr1:19725483-19728007 FORWARD LENGTH=567
Length = 566
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/452 (18%), Positives = 176/452 (38%), Gaps = 52/452 (11%)
Query: 47 DISPASRGWKIRAKIARMWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFRPL 106
++ P W I+ KI W++ + +++L DE GN + A I K +
Sbjct: 12 NLKPFKTSWCIQVKILHAWNHYTKGSGMS---YEMMLADEDGNKIQAGIKKEHLLKLQRY 68
Query: 107 LQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSY 166
++ +F + + Y+ + Y I + T + + P +LV F+
Sbjct: 69 VKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQSST---RFSNSPTISDEIWLDLVNFND 125
Query: 167 LSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHA 226
+ Q +VIG ++ V ++ + + K T K LRD + + LWG+
Sbjct: 126 VLSGTLDQNKLVNVIGQLVNVGEIQLLDVQGKP--TKKIDFQLRDTDDNRLPCSLWGKF- 182
Query: 227 PDFDADAVHSVGQDNAVVGIFVDTL----MKAYNNEETLSGG-SACKWYLNEDIPEINQF 281
AD +H V ++ +V GI + + + Y ++S A + ++N + E+ +F
Sbjct: 183 ----ADQIHKVSKE-SVGGIVICLIRWAKLGHYKEIRSISNAFDASEVFINPILTEVEEF 237
Query: 282 FD---------SLGDSAPKIQWISTGAESFGSSQRPARLEHKSVADLKKIDPWEAAGAGF 332
+ ++ + P+ Q + E R + E K++A+LK +E
Sbjct: 238 KNLLPSDGLALTIMEPKPRFQPLRVREE------RSKQFERKTIAELKA--SFEVEKVKI 289
Query: 333 SCTVTIAKLXXXXXXXXXXXXRCHR---------AATAXXXXXXXXXXXXXVTAIP-KYR 382
C +I + +C++ ++ A VT+I +Y
Sbjct: 290 IC--SILSIDLDYSWYYYAHIKCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYW 347
Query: 383 LCLIGTDGTNSAEFVLFGRVAQQVVGRPVMNLIKFQGRSDN----IPKEIAAVVSQKFTF 438
L L D T ++ +LF + ++G P L+ + +P + ++ + + F
Sbjct: 348 LHLDIMDNTGESKLMLFDSFVEPIIGCPATELLDVTNEQIDEPQPLPDVVKNIIGKTYQF 407
Query: 439 AVSVTERSLMHRNISFQVNGIETFFGRQGSIP 470
V V + ++ N ++V + T ++P
Sbjct: 408 LVCVEQDNISRGNDEYKVAEVLTSQNINQALP 439
>AT5G61000.1 | chr5:24549682-24552641 REVERSE LENGTH=630
Length = 629
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 12/248 (4%)
Query: 45 LCDISPASRGWKIRAKIAR---MWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEAD 101
L ++P W I+ ++ M +Y + +V+L DE+G + A + A
Sbjct: 184 LVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELT--DEEGTQIQATMFNDAAR 241
Query: 102 KFRPLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNL 161
KF Q KVY S+ + + +K N Y + L + VE+ + P FN
Sbjct: 242 KFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNF 301
Query: 162 VQFSYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVL 221
V L L V +E D+IG++ VS +R + PKR I L D + V + L
Sbjct: 302 VPIEELGLYVNQKE-LIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSL 360
Query: 222 WGEHAPDFDADAVHSVGQDNAVVGIFVDTLMKAYNNEETLSGGSACKWYLNEDIPE---I 278
W + A + + Q + + +L +LS S +N + PE +
Sbjct: 361 WNDLATGIGQELLDMADQSPVIA---IKSLKVGDFQGVSLSTISRSNVVINPESPEAKKL 417
Query: 279 NQFFDSLG 286
+FDS G
Sbjct: 418 KSWFDSEG 425
>AT2G05642.1 | chr2:2098253-2100867 REVERSE LENGTH=533
Length = 532
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 167/461 (36%), Gaps = 109/461 (23%)
Query: 47 DISPASR------GWKIRAKIARMWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEA 100
+I+P S+ K++ +IAR+W Y + +DL+L+D+KG + A I
Sbjct: 4 EITPVSQLHSHLSTCKVKVRIARLWAYHKKDRPKDIMGIDLLLVDDKGERIQASIRSQLL 63
Query: 101 DKFRPLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFN 160
KF+ L+E Y F I + +Y+ + Y I T++
Sbjct: 64 SKFQEKLEEGDCYMIMNFEISDNGGSYRASSHPYKINFMSMTHI---------------- 107
Query: 161 LVQFSYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLV 220
+GMQE L V ++ + T + LRDL + +
Sbjct: 108 ----------IGMQE--------------LKEVNVSGR--QTKLLNLQLRDLGESVIDVT 141
Query: 221 LWGEHAPDFDADAVHSVGQDNAVVGIFVDTLMK----------------------AYNNE 258
LW + A D + + G + + + V +LMK ++ +
Sbjct: 142 LWEKWAEDLYS---YVKGYKDGSI-VLVGSLMKIKTYFKNVYLTFTIRDSLIWFLIFSRQ 197
Query: 259 ETLSGGS-ACKWYLNEDIPEINQFFDSLGDS---APKIQWISTGAESFGSSQRPARL-EH 313
+ S + K ++N I EI +F +SL S A T + S S+ L +
Sbjct: 198 DLCPKSSFSTKLFINSSIAEITEFKESLAKSDCLALTTISTITSSSSSKHSKPSFSLRDQ 257
Query: 314 KSVADLK------------KID---PWEAAGAGFSCTVTIAKLXXXXXXXXXXXXRCHRA 358
K++AD+ ID PW G C +
Sbjct: 258 KTIADINSGGACNIIASIFSIDTKVPWFYIGCNICFKKVSPYFNPETEEIEAGKYECEKC 317
Query: 359 ATAXXXXXXXXXXXXXVTAIPKYRLCLIGTDGTNSAEFVLFGRVAQQVVGRPVMNLIKFQ 418
T T ++R+ + D T A F+LF + +++ + L++ Q
Sbjct: 318 DT------------FVTTTSTRFRVQVTVLDHTGEASFLLFDQDVIKLIHKSAYELLEQQ 365
Query: 419 ---GRSDNIPKEIAAVVSQKFTFAVSVTERSLMHRNISFQV 456
RSD IP+E+ + ++F F + ++ + R F+V
Sbjct: 366 VQFNRSDKIPQELLDLEGRQFVFTIQGSDSTKFSRPSIFRV 406
>AT1G14800.1 | chr1:5099572-5102558 FORWARD LENGTH=385
Length = 384
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 56 KIRAKIARMWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFRPLLQESKVYTF 115
++ ++ R WD D + + L+L+DEK + ++A IP A FR +L+E ++
Sbjct: 29 QVVGRLLRFWDARNIKKDGQFMGIVLLLLDEKCSVIHAFIPAALASHFRQVLREGIIFNV 88
Query: 116 SKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSYLSLRVGMQE 175
S F + YK + ++++ P T + +V++V F L F L
Sbjct: 89 SGFEVGRCTKLYKITDHPFLLRFLPATTIIEVSDVGPTIEREKFMLRNFDNLQALANTNI 148
Query: 176 YFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHAPDFDA 231
I + G + + + T + V+ R ++ V L LW + A F A
Sbjct: 149 ELPGQITFVQGSN-------LNDPTSTQRLVLRYRIDSSVIVYLSLWDDVAATFRA 197
>AT2G06510.1 | chr2:2585215-2587601 FORWARD LENGTH=641
Length = 640
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 8/180 (4%)
Query: 48 ISPASRGWKIRAKIARMWD---YTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFR 104
++P W I+A++ D Y D DL +D G + D+F
Sbjct: 203 LNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDL--LDYDGGEIRVTCFNALVDRFY 260
Query: 105 PLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQF 164
+ + KVY SK + P++ + N++ I L + VE + P F+
Sbjct: 261 DVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPI 320
Query: 165 SYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGE 224
S + DVIG++ V+ + + +T +R++ L+D + V++ LWGE
Sbjct: 321 S--DIENAENNTILDVIGVVTSVNPSVPI-LRKNGMETHRRILNLKDESGKAVEVTLWGE 377
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,530,238
Number of extensions: 382955
Number of successful extensions: 785
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 783
Number of HSP's successfully gapped: 7
Length of query: 474
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 372
Effective length of database: 8,310,137
Effective search space: 3091370964
Effective search space used: 3091370964
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)