BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0834400 Os01g0834400|AK108142
(118 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174 180 1e-46
AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177 179 3e-46
AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165 175 4e-45
AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162 174 6e-45
AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191 168 4e-43
AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216 157 1e-39
AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161 144 1e-35
AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235 143 2e-35
AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239 138 5e-34
AT1G09030.1 | chr1:2908611-2909030 REVERSE LENGTH=140 129 4e-31
AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160 77 2e-15
AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164 76 3e-15
AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276 49 6e-07
>AT2G37060.1 | chr2:15576336-15577660 FORWARD LENGTH=174
Length = 173
Score = 180 bits (456), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/114 (75%), Positives = 101/114 (88%), Gaps = 3/114 (2%)
Query: 5 GGAGMADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECV 64
GG G ++G D+S PRS VREQDRFLPIANISRIMK+ +PANGKIAKDAKE +QECV
Sbjct: 10 GGCGSHESGGDQS---PRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECV 66
Query: 65 SEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
SEFISFVTSEASDKCQ+EKRKTING+DLL+AM TLGFE+Y++PLK+YL +YRE+
Sbjct: 67 SEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT3G53340.1 | chr3:19774667-19775991 REVERSE LENGTH=177
Length = 176
Score = 179 bits (454), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 21 PRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQ 80
PRS VREQDRFLPIANISRIMK+ +P NGKIAKDAKET+QECVSEFISFVTSEASDKCQ
Sbjct: 22 PRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQ 81
Query: 81 KEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
+EKRKTING+DLL+AM TLGFE+Y+DPLK+YL +YRE+
Sbjct: 82 REKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREM 119
>AT2G38880.8 | chr2:16238685-16240316 FORWARD LENGTH=165
Length = 164
Score = 175 bits (443), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/111 (75%), Positives = 97/111 (87%), Gaps = 1/111 (0%)
Query: 9 MADAGHDESGSPPRSGG-VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEF 67
MAD +G SGG VREQDR+LPIANISRIMKKA+P NGKI KDAK+T+QECVSEF
Sbjct: 1 MADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEF 60
Query: 68 ISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
ISF+TSEASDKCQKEKRKT+NG+DLL+AM TLGFE+Y++PLKIYL +YREV
Sbjct: 61 ISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT4G14540.1 | chr4:8344663-8345148 FORWARD LENGTH=162
Length = 161
Score = 174 bits (442), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 98/113 (86%), Gaps = 5/113 (4%)
Query: 9 MADAGHDESGSPPRSGG---VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVS 65
MAD+ +D G + GG REQDRFLPIAN+SRIMKKA+PAN KI+KDAKET+QECVS
Sbjct: 1 MADSDNDSGGH--KDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 58
Query: 66 EFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
EFISF+T EASDKCQ+EKRKTING+DLL+AM TLGFE+YV+PLK+YL KYREV
Sbjct: 59 EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREV 111
>AT5G47640.1 | chr5:19309414-19309986 FORWARD LENGTH=191
Length = 190
Score = 168 bits (426), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 88/92 (95%)
Query: 27 REQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKT 86
REQDRFLPIAN+SRIMKKA+PAN KI+KDAKET+QECVSEFISFVT EASDKCQKEKRKT
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 87 INGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
ING+DLL+AM TLGFE+YV+PLK+YL ++RE+
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQRFREI 117
>AT2G13570.1 | chr2:5655842-5656489 REVERSE LENGTH=216
Length = 215
Score = 157 bits (397), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 90/113 (79%)
Query: 6 GAGMADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVS 65
G + G S + + +EQDRFLPIAN+ RIMKK +P NGKI+KDAKET+QECVS
Sbjct: 14 GVAETNPGSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVS 73
Query: 66 EFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
EFISFVT EASDKCQ+EKRKTING+D+++A+ TLGFE+YV PLK+YL KYR+
Sbjct: 74 EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDT 126
>AT2G47810.1 | chr2:19582938-19583420 REVERSE LENGTH=161
Length = 160
Score = 144 bits (362), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 77/91 (84%)
Query: 26 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRK 85
V+EQDR LPIAN+ RIMK +PAN K++K+AKET+QECVSEFISFVT EASDKC KEKRK
Sbjct: 49 VKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRK 108
Query: 86 TINGEDLLFAMGTLGFEEYVDPLKIYLHKYR 116
T+NG+D+ +AM LGF++Y LK YLH+YR
Sbjct: 109 TVNGDDICWAMANLGFDDYAAQLKKYLHRYR 139
>AT5G47670.1 | chr5:19315061-19315975 FORWARD LENGTH=235
Length = 234
Score = 143 bits (361), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 83/93 (89%)
Query: 26 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRK 85
VREQDRF+PIAN+ RIM++ +PA+ KI+ D+KET+QECVSE+ISF+T EA+++CQ+E+RK
Sbjct: 56 VREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRK 115
Query: 86 TINGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
TI ED+L+AM LGF++Y++PL +YLH+YRE+
Sbjct: 116 TITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL 148
>AT1G21970.1 | chr1:7727750-7729571 REVERSE LENGTH=239
Length = 238
Score = 138 bits (348), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 81/92 (88%)
Query: 27 REQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKT 86
REQD+++PIAN+ RIM+K +P++ KI+ DAKET+QECVSE+ISFVT EA+++CQ+E+RKT
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 87 INGEDLLFAMGTLGFEEYVDPLKIYLHKYREV 118
I ED+L+AM LGF+ YVDPL +++++YRE+
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPLTVFINRYREI 149
>AT1G09030.1 | chr1:2908611-2909030 REVERSE LENGTH=140
Length = 139
Score = 129 bits (323), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 74/90 (82%)
Query: 28 EQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTI 87
++DR LPIAN+ R+MK+ +P+N KI+K+AK+T+QEC +EFISFVT EAS+KC +E RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 88 NGEDLLFAMGTLGFEEYVDPLKIYLHKYRE 117
NG+D+ +A+ TLG + Y D + +LHKYRE
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYRE 92
>AT5G23090.2 | chr5:7749391-7750203 FORWARD LENGTH=160
Length = 159
Score = 76.6 bits (187), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Query: 25 GVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKR 84
G ++D LP A +++I+K+ +P + ++A+DA++ L EC EFI+ V+SE++D C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDK 67
Query: 85 KTINGEDLLFAMGTLGFEEYVDPLKIYL----HKY 115
+TI E +L A+ LGF EY++ ++Y HKY
Sbjct: 68 RTIAPEHVLKALQVLGFGEYIE--EVYAAYEQHKY 100
>AT5G08190.1 | chr5:2636204-2637125 FORWARD LENGTH=164
Length = 163
Score = 76.3 bits (186), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
Query: 25 GVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKR 84
G ++D LP A +++I+K+ +PA+ ++A+DA++ L EC EFI+ ++SE+++ C KE +
Sbjct: 8 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDK 67
Query: 85 KTINGEDLLFAMGTLGFEEYVDPLKIYL----HKY 115
+TI E +L A+ LGF EYV+ ++Y HKY
Sbjct: 68 RTIAPEHVLKALQVLGFGEYVE--EVYAAYEQHKY 100
>AT2G27470.1 | chr2:11745196-11746375 REVERSE LENGTH=276
Length = 275
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 33 LPIANISRIMKKAVPA-----NGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTI 87
LP+A + R++KK + + I K+A E FI ++++ A+D C+ +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 88 NGEDLLFAMGTLGFEEYVDPLKIYLHKY 115
+D+ A+ + F E+++PLK L +
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDF 98
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,696,613
Number of extensions: 101254
Number of successful extensions: 249
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 13
Length of query: 118
Length of database: 11,106,569
Length adjustment: 85
Effective length of query: 33
Effective length of database: 8,776,209
Effective search space: 289614897
Effective search space used: 289614897
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 105 (45.1 bits)