BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0819900 Os01g0819900|AK067401
(825 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40730.1 | chr2:16990083-16996072 REVERSE LENGTH=799 1080 0.0
AT1G71410.1 | chr1:26913070-26917515 REVERSE LENGTH=910 91 3e-18
AT1G22870.1 | chr1:8089501-8094173 FORWARD LENGTH=914 82 9e-16
>AT2G40730.1 | chr2:16990083-16996072 REVERSE LENGTH=799
Length = 798
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/836 (69%), Positives = 652/836 (77%), Gaps = 49/836 (5%)
Query: 1 MFKFLKEVVAGSGSGLKDFPYTIGEPYASAWGSWTHHRGTSKDDGSPVSIFSLSGSNPQD 60
MFKFLK VVAGSG+GLKD PY IG+PY SAWGSW+H RGTSKDDGSPVSIF+LSG+N QD
Sbjct: 1 MFKFLKGVVAGSGTGLKDLPYNIGDPYPSAWGSWSHFRGTSKDDGSPVSIFALSGNNAQD 60
Query: 61 RHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVTPLSEKLKELN 120
HL AGRNGVKRLRTVRHPNILSFLHSTE E DG K TIYIVTEPV PLS+K+KEL
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETHDGSTTKVTIYIVTEPVMPLSDKIKELG 120
Query: 121 LGGTQRDEYFAWGLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQTLDWKLHAFDVLSEFD 180
L TQRDEYFA GLHQI KAVSFLNNDCKLVHGNVC+ SVVVT TLDWKLHA DVLSEFD
Sbjct: 121 LKATQRDEYFALGLHQIGKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHALDVLSEFD 180
Query: 181 ANNEASNSPMLQFEWLVGTQYKPMELTKSDWVSIRKSPPWAIDSWGLGCLIYELFSGAKL 240
+NE+++ PML +EWLVGTQYKPME+ KSDWV+IRKSPPWAIDSWGLGCLIYELFSG+KL
Sbjct: 181 GSNESASGPMLPYEWLVGTQYKPMEMVKSDWVAIRKSPPWAIDSWGLGCLIYELFSGSKL 240
Query: 241 TRTEDLRNTASIPKSLLPDYQRLLSSAPSRRMNPSKLIDNSEFFQNKLVETIQFMEVLNL 300
+TE+LRNT IPKSLLPDYQRLLSS PSRR+N SKL++N E+FQNKLV+TI FM++LNL
Sbjct: 241 AKTEELRNTVGIPKSLLPDYQRLLSSMPSRRLNTSKLLENGEYFQNKLVDTIHFMDILNL 300
Query: 301 KDSVEKDSFFRKLPNIAEQLPREIVLKKLLPVLASALEFGSAAAPALVVLLKMGSWLPAD 360
KDSVEKD+FFRKLPN+AEQLPREIVLKKLLP+LAS+LEFGSAAAPAL LLKMGSWL +
Sbjct: 301 KDSVEKDTFFRKLPNVAEQLPREIVLKKLLPLLASSLEFGSAAAPALTALLKMGSWLSTE 360
Query: 361 QFSAKVLPTIVKLFASNDRAIRVSLLQHIDQFGESLTAQTVDEQVFPHVATGFSDTSAFL 420
FS KVLPTIVKLFASNDRAIRVSLLQH+DQFGES++ Q VDEQV+PHVATGF+DTSAFL
Sbjct: 361 DFSVKVLPTIVKLFASNDRAIRVSLLQHVDQFGESMSGQIVDEQVYPHVATGFADTSAFL 420
Query: 421 RELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIANYMNDGTRK 480
RELTLKSMLVLAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNIA Y+N+GTRK
Sbjct: 421 RELTLKSMLVLAPKLSQRTLSGSLLKYLSKLQVDEEPAIRTNTTILLGNIATYLNEGTRK 480
Query: 481 RVLINAFTVRALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNVVVLTFDPDSDVRT 540
RVLINAFTVRALRDTFPPAR AGI+AL TS+ Y+ TEIATRILPN+VVLT D DSDVR+
Sbjct: 481 RVLINAFTVRALRDTFPPARGAGIVALCATSTTYDDTEIATRILPNIVVLTIDQDSDVRS 540
Query: 541 KAFQATDQFLQIAKQHHEKLTMGDNSAAEATGIQLKPGNAGLLGWAMSSLTQKGKGSDHG 600
KAFQA +QFLQI KQ++EK G+ A + G P AGL+GWAMSSLT KGK
Sbjct: 541 KAFQAVEQFLQILKQNYEKTNAGEIGA--SGGASAIPETAGLIGWAMSSLTLKGK----- 593
Query: 601 PXXXXXXXXXXXXXXXXXXXDNRSSTVAYAPSTSSS---------LDQTAPASARSSVDG 651
P N +ST APS +S DQ AP S +S DG
Sbjct: 594 PLEQAPLASSSSAPSLAAAASNATSTATEAPSVKASHHTRSNSDFTDQPAPPSP-TSTDG 652
Query: 652 WGEIENDNTQEENGSDKEGWDDVDPFDEKPPPSLLSNIQAAQKRPVAQPKQPVSNSSRLN 711
WG+ EN E + SDK+GW D++P DE P L+NIQAAQKRPV+Q +P + +S +
Sbjct: 653 WGDAEN-GISEGHESDKDGW-DLEPLDEPKPSPALANIQAAQKRPVSQSSRPSAATS--S 708
Query: 712 QPKVPKPEEDPLWGXXXXXXXXXXXXXXDIKPSTSHNDDDDLWGSIAAPPPKSAGKPLKP 771
+PK+ + + + +DDDLWGSIAAPPP + +PL
Sbjct: 709 RPKISTVK------------------------AAAKTEDDDLWGSIAAPPPATTSRPLNV 744
Query: 772 PAAANSD--DLWGAIAAPPPSTKARPLASSGRGRGTKPAQPKLGAQRIGRTSSTGM 825
SD D W AIAAPPP+T+A+PL SSGRGRG KPA KLGAQRI RTSS GM
Sbjct: 745 KKTVQSDDEDPWAAIAAPPPTTRAKPL-SSGRGRGAKPAALKLGAQRINRTSS-GM 798
>AT1G71410.1 | chr1:26913070-26917515 REVERSE LENGTH=910
Length = 909
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 210/502 (41%), Gaps = 44/502 (8%)
Query: 59 QDRHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPV-TPLSEKLK 117
+D L R +L +RHP ++ + + + K+ + +VTEP+ ++ L
Sbjct: 97 EDAFLDLIRADAGKLVRLRHPGVVHVVQALDEN-------KNAMALVTEPLFASVANALG 149
Query: 118 EL-NLGGTQRDEY--------FAWGLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQTLDW 168
+ N+G +D GL QIS+ ++FL+N+ L+H + +V++T W
Sbjct: 150 NVENVGNVPKDLKSMEMSLLEVKHGLLQISETLNFLHNNANLIHRAISPENVLITSAGSW 209
Query: 169 KLHAFD-VLSEFDANNEASNSPMLQFEWLVGTQYKPME--LTKSDWVSIRKSPPWA---I 222
KL F +S A N + E+ V P++ L + +R P A
Sbjct: 210 KLAGFGFAISAAQAGNLDNMQSFHYSEYDVEDSILPVQPSLNYTAPELMRSKSPSAGASS 269
Query: 223 DSWGLGCLIYELFSGAKLTRTED----LRNT---------ASIPKSLLPDYQRLLSSAPS 269
D + GCL Y L + L + NT +SIP L+ D QR+LS+ S
Sbjct: 270 DIFSFGCLAYHLVARKPLFDCNNNVKMYMNTLNYITNESFSSIPSELVSDLQRMLSTNES 329
Query: 270 RRMNPSKL-IDNSEFFQ-NKLVETIQFMEVLNLKDSVEKDSFFRKLPNIAEQLPREIVLK 327
R P+ L S FF+ + + ++F++ L +D+++K F + L ++ + ++
Sbjct: 330 FR--PTALDFTGSNFFRSDARLRALRFLDHLLERDNMQKSEFLKALSDMWKDFDSRVLRY 387
Query: 328 KLLPVLASALEFGSAAAPALVVLLKMGSWLPADQFSAKVLPTIVKLFASNDRAIRVSLLQ 387
K+LP L + L L ++L + F LP +V + ++ + L++
Sbjct: 388 KVLPPLCAELRNLVLQPIILPMVLTIAQSQDRTDFELITLPALVPVLSTASGDTLLLLVK 447
Query: 388 HIDQFGESLTAQTVDEQVFPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTISGSLLKY 447
H D ++ + V P + ++D ++E LK +A +L + + ++L
Sbjct: 448 HADLITNKTDSEHLVSHVLPLLLRAYNDNDVRIQEEVLKRSTSVAKQLDGQVVRQAILPR 507
Query: 448 LSKLQVDEE-PAIRTNTTILLGNIANYMNDGTRKRVLINAFTVRALRDTFPPARAAGIMA 506
+ L + A+R N + L + ++ +L A+ + P +A
Sbjct: 508 VHGLALKTTVAAVRVNALLCLAELVQTLDKPAAIEILETIQRCTAVDRSAPTLMCTLAVA 567
Query: 507 LSVTSSY---YEMTEIATRILP 525
++ Y + + T ++P
Sbjct: 568 NAILKQYGVEFTAEHVLTLMMP 589
>AT1G22870.1 | chr1:8089501-8094173 FORWARD LENGTH=914
Length = 913
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 202/513 (39%), Gaps = 60/513 (11%)
Query: 59 QDRHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEP---------- 108
+D L R +L +RHP ++ + + + K+ + +VTEP
Sbjct: 97 EDAFLDLIRADSGKLVRLRHPGVVHVVQALDEN-------KNAMAMVTEPLFASVANALG 149
Query: 109 ----VTPLSEKLKELNLGGTQRDEYFAWGLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQ 164
V + + LK + + + GL QI++ ++FL+N+ L+H V +V +T
Sbjct: 150 NVENVDNVPKDLKSMEMSLLE----VKHGLLQIAETLNFLHNNAHLIHRAVSPENVFITS 205
Query: 165 TLDWKLHAF------------DVLSEFDANNEASNSPMLQFEWLVGTQYKPMELTKSDWV 212
WKL F D L F + +L + Y EL +S
Sbjct: 206 AGSWKLAGFGFAISQAQDGNLDNLQSFHYSEYDVEDSILPLQ--PSLNYTAPELVRSKTS 263
Query: 213 SIRKSPPWAIDSWGLGCLIYELFSGAKLTRTED----LRNT---------ASIPKSLLPD 259
S S D + GCL Y L + L + NT +SIP L+ D
Sbjct: 264 SAGVSS----DIFSFGCLTYHLVARKPLFDCHNNVKMYMNTLNYLTNETFSSIPSDLVSD 319
Query: 260 YQRLLSSAPSRRMNPSKLIDNSEFFQNKLVETIQFMEVLNLKDSVEKDSFFRKLPNIAEQ 319
QR+LS S R +S F + + ++F++ + +D+++K F + L ++ +
Sbjct: 320 LQRMLSMNESYRPTALDFTGSSFFRSDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKD 379
Query: 320 LPREIVLKKLLPVLASALEFGSAAAPALVVLLKMGSWLPADQFSAKVLPTIVKLFASNDR 379
++ K+LP L + L L ++L + + F LP +V + ++
Sbjct: 380 FDSRVLRYKVLPPLCAELRNLVMQPVILPMVLTIAESQDKNDFELTTLPALVPVLSTATG 439
Query: 380 AIRVSLLQHIDQFGESLTAQTVDEQVFPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRT 439
+ L++ + A+ + V P + ++D ++E LK +A +L +
Sbjct: 440 DTLLLLIKRAELIINKTNAEHLVSHVLPLLLRAYNDNDVRIQEEVLKRSTSVAKQLDGQV 499
Query: 440 ISGSLLKYLSKLQVDEE-PAIRTNTTILLGNIANYMNDGTRKRVLINAFTVRALRDTFPP 498
+ ++L + L + A+R N + L + ++ +L A+ + P
Sbjct: 500 VRQAILPRVHGLALKTTVAAVRVNALLCLAELVQTLDKLAVTEILQTIQRCTAVDRSAPT 559
Query: 499 ARAAGIMALSVTSSY-YEMTEIATRILPNVVVL 530
+A ++ Y E T + +LP ++ L
Sbjct: 560 LMCTLAIANAILKQYGVEFT--SEHVLPLIIPL 590
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,879,372
Number of extensions: 775158
Number of successful extensions: 2459
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2444
Number of HSP's successfully gapped: 3
Length of query: 825
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 718
Effective length of database: 8,173,057
Effective search space: 5868254926
Effective search space used: 5868254926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 116 (49.3 bits)