BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0818400 Os01g0818400|AK102788
(267 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35550.1 | chr4:16875814-16877167 REVERSE LENGTH=269 217 6e-57
AT1G20700.1 | chr1:7182558-7183866 FORWARD LENGTH=212 161 3e-40
AT1G20710.1 | chr1:7184485-7185267 FORWARD LENGTH=198 132 1e-31
AT2G33880.1 | chr2:14341639-14343597 REVERSE LENGTH=379 72 4e-13
AT3G18010.1 | chr3:6161155-6163183 REVERSE LENGTH=351 70 9e-13
AT5G45980.1 | chr5:18648921-18650698 FORWARD LENGTH=326 69 2e-12
AT2G28610.1 | chr2:12262115-12263286 FORWARD LENGTH=245 67 1e-11
AT5G59340.1 | chr5:23933408-23934627 REVERSE LENGTH=261 65 5e-11
AT3G11260.1 | chr3:3527606-3528263 FORWARD LENGTH=183 64 1e-10
AT1G46480.1 | chr1:17236903-17237953 REVERSE LENGTH=252 64 1e-10
AT5G05770.1 | chr5:1734487-1734855 FORWARD LENGTH=123 62 4e-10
AT2G01500.1 | chr2:224470-225997 REVERSE LENGTH=272 58 5e-09
AT2G17950.1 | chr2:7809100-7810671 REVERSE LENGTH=293 57 8e-09
AT5G17810.1 | chr5:5880576-5882602 REVERSE LENGTH=269 53 1e-07
AT3G03660.2 | chr3:889515-892162 REVERSE LENGTH=298 52 3e-07
AT5G46010.1 | chr5:18660584-18661183 FORWARD LENGTH=123 50 9e-07
>AT4G35550.1 | chr4:16875814-16877167 REVERSE LENGTH=269
Length = 268
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/159 (68%), Positives = 123/159 (77%), Gaps = 8/159 (5%)
Query: 1 MEWDKA------KASSGEAVD-DRXXXXXXXXYVKVMTDEQMEVLRKQISIYATICEQLV 53
MEWD +S+ + +D + YVKVMTDEQ E LRKQI+IY TICE+LV
Sbjct: 2 MEWDNQLQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLV 61
Query: 54 EMHRALTAQQDSIAGMRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGT 113
EMH+ LTAQQD +AG R+G LY DP+M GHK+TARQRWTPTP+QLQILE IFDQG GT
Sbjct: 62 EMHKTLTAQQD-LAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGT 120
Query: 114 PSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 152
PSKQKIKDIT ELSQHGQI+E NVYNWFQNRRARSKRKQ
Sbjct: 121 PSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQ 159
>AT1G20700.1 | chr1:7182558-7183866 FORWARD LENGTH=212
Length = 211
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 102/127 (80%), Gaps = 2/127 (1%)
Query: 28 KVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMR-LGNLYCDPLMVPGG-H 85
+VMT+EQME+LRKQI++YA IC+QLV +H +L++ +G+R + Y DP+ H
Sbjct: 29 RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSH 88
Query: 86 KITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRR 145
+I+ R RWTPT QLQILE+I+D+G+GTP++++I++I ELS+HGQI+ETNVYNWFQNRR
Sbjct: 89 RISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRR 148
Query: 146 ARSKRKQ 152
ARSKRKQ
Sbjct: 149 ARSKRKQ 155
>AT1G20710.1 | chr1:7184485-7185267 FORWARD LENGTH=198
Length = 197
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
Query: 28 KVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMR-LGNLYCDPLMVPG-GH 85
+VMTDEQME LRKQI+IYA +C+QLV +H +L++ +GM + Y DP++ H
Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72
Query: 86 KITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRR 145
++ R RWTPT QLQILENI+ +G+GTP+ ++IK+IT ELS+HGQI E NVY+WFQNRR
Sbjct: 73 GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132
Query: 146 ARSKRKQ 152
ARSKRKQ
Sbjct: 133 ARSKRKQ 139
>AT2G33880.1 | chr2:14341639-14343597 REVERSE LENGTH=379
Length = 378
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 90 RQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSK 149
+ RW P P Q++ILE IF+ G P +++I+ I A+L ++GQ+ + NV+ WFQNR++RSK
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 150 RK 151
K
Sbjct: 113 HK 114
>AT3G18010.1 | chr3:6161155-6163183 REVERSE LENGTH=351
Length = 350
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 87 ITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRA 146
+ RW PTP QL++LE ++ QG TPS I+ ITA+L ++G+I NV+ WFQN +A
Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130
Query: 147 RSKRKQ 152
R ++K+
Sbjct: 131 RERQKR 136
>AT5G45980.1 | chr5:18648921-18650698 FORWARD LENGTH=326
Length = 325
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 90 RQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSK 149
+ RW P P Q++ILE+IF+ G P +++I+ I L ++GQI + NV+ WFQNR++R+K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 150 RK 151
K
Sbjct: 113 HK 114
>AT2G28610.1 | chr2:12262115-12263286 FORWARD LENGTH=245
Length = 244
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 88 TARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRAR 147
A RW PTP QL ILE ++ G TP+ +I+ ITA L+ +G+I NV+ WFQN +AR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 148 SKRK 151
++K
Sbjct: 64 DRQK 67
>AT5G59340.1 | chr5:23933408-23934627 REVERSE LENGTH=261
Length = 260
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 92 RWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRK 151
RW PT Q+ +LEN++ +G TPS +I+ IT L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 152 Q 152
Q
Sbjct: 74 Q 74
>AT3G11260.1 | chr3:3527606-3528263 FORWARD LENGTH=183
Length = 182
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 84 GHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQN 143
G T RW PT QL+IL ++F G TP+ +I+ I+ ELS +G+I NV+ WFQN
Sbjct: 16 GGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQN 75
Query: 144 RRARSKRKQ 152
+AR ++K+
Sbjct: 76 HKARERQKR 84
>AT1G46480.1 | chr1:17236903-17237953 REVERSE LENGTH=252
Length = 251
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 82 PGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWF 141
PGG RW PT Q+ ILE ++ G TP+ Q+I+ IT +L ++G+I NV+ WF
Sbjct: 86 PGG------TRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWF 139
Query: 142 QNRRARSKRKQ 152
QN +AR ++KQ
Sbjct: 140 QNHKARERQKQ 150
>AT5G05770.1 | chr5:1734487-1734855 FORWARD LENGTH=123
Length = 122
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 92 RWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRK 151
RW PT Q+++L ++F G TPS +I+ I+ ELS +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>AT2G01500.1 | chr2:224470-225997 REVERSE LENGTH=272
Length = 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 89 ARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRA 146
A RW PTP Q+ LE ++ G TP+ ++I+ I ++L ++G+I NV+ WFQN +A
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>AT2G17950.1 | chr2:7809100-7810671 REVERSE LENGTH=293
Length = 292
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 88 TARQ---RWTPTPMQLQILENIF-DQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQN 143
T RQ RWTPT Q++IL+ ++ + +P+ +I+ ITA L Q G+I NV+ WFQN
Sbjct: 31 TCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQN 90
Query: 144 RRARSKRKQ 152
+AR ++K+
Sbjct: 91 HKARERQKK 99
>AT5G17810.1 | chr5:5880576-5882602 REVERSE LENGTH=269
Length = 268
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 89 ARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRR 145
R RW+P P Q+ ILE+IF+ G P K + I L + G + + NV+ WFQNRR
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRR 74
>AT3G03660.2 | chr3:889515-892162 REVERSE LENGTH=298
Length = 297
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 89 ARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRR 145
R RW+P P Q+ ILE+IF G P K++ I L + G + + NV+ WFQNRR
Sbjct: 30 VRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQNRR 86
>AT5G46010.1 | chr5:18660584-18661183 FORWARD LENGTH=123
Length = 122
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 90 RQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHG-QISETNVYNWFQNRRARS 148
+ W P Q QILE +F G PS IK IT +L +G ++ + +VY WF NR+
Sbjct: 52 KPEWKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRKYSR 111
Query: 149 KRK 151
K K
Sbjct: 112 KPK 114
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,823,979
Number of extensions: 159692
Number of successful extensions: 423
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 435
Number of HSP's successfully gapped: 16
Length of query: 267
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 170
Effective length of database: 8,447,217
Effective search space: 1436026890
Effective search space used: 1436026890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)